vOTU vOTU-064077

vOTU: vOTU-064077

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-064077
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00177 → vSUBGEN-47663 → vOTU-064077
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1856195
Biosample ID	SAMN18819093
Genome length (bp)	40,722 bps
CheckV completeness	98.91% (High-quality)
CDS count	73
CDS density	93.33%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	688	Host agreement	91.57
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	12	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 98.91)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1856195_1	phrog_27197	84.6	9.7e-25	N/A	unknown function
eggNOG-mapper	UHGV-1856195_1	394503.Ccel_3068	55.5	0.0000000345	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1856195_1	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
PHROG	UHGV-1856195_2	phrog_124	117.3	1.3e-34	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1856195_2	UniRef90_A0A2Z4QBI4	391.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-1856195_2	445972.ANACOL_00146	219.0	0	AAA domain	N/A
Pfam	UHGV-1856195_2	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1856195_2	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-1856195_2	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-1856195_3	UniRef90_A0A2Z4QA33	233.0	0	PD-(D/E)XK nuclease	N/A
eggNOG-mapper	UHGV-1856195_3	718252.FP2_01050	125.0	4.1e-33	N/A	N/A
structural_annotation	UHGV-1856195_3	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_4	phrog_378	95.9	5e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1856195_4	UniRef90_UPI001E43F9BA	68.9	0.0000000000085	N/A	N/A
eggNOG-mapper	UHGV-1856195_4	1423732.BALS01000134_gene393	64.7	0.0000000000854	N/A	N/A
structural_annotation	UHGV-1856195_4	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_5	phrog_5810	72.1	7.7e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1856195_5	UniRef90_UPI001D06849A	93.6	1.26e-18	replisome organizer	N/A
eggNOG-mapper	UHGV-1856195_5	742740.HMPREF9474_03117	192.0	0	N/A	N/A
structural_annotation	UHGV-1856195_5	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
Pfam	UHGV-1856195_7	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1856195_7	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_8	phrog_3136	142.8	9.40271e-43	N/A	unknown function
UniRef90	UHGV-1856195_8	UniRef90_A0A329TS47	159.0	0	ASCH domain-containing protein	N/A
COG	UHGV-1856195_8	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1856195_8	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_9	phrog_355	73.8	2.4e-21	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1856195_9	UniRef90_A0A413FXK8	115.0	1.65e-31	N/A	N/A
eggNOG-mapper	UHGV-1856195_9	573061.Clocel_3558	92.0	5.35e-23	N/A	N/A
Pfam	UHGV-1856195_9	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-1856195_9	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-1856195_9	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_10	phrog_38832	103.7	2.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-1856195_10	665956.HMPREF1032_00143	108.0	1.32e-27	N/A	N/A
PHROG	UHGV-1856195_18	phrog_1770	55.5	0.0000000000000011	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1856195_18	536233.CLO_1822	140.0	4.2e-40	N/A	N/A
structural_annotation	UHGV-1856195_18	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1856195_21	742738.HMPREF9460_02503	90.5	1.95e-22	N/A	N/A
structural_annotation	UHGV-1856195_21	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1856195_22	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-1856195_23	K07474	104.9	1.4e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1856195_23	phrog_51	113.0	2.3e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1856195_23	UniRef90_A0A396NMY4	130.0	1.4e-36	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1856195_23	476272.RUMHYD_01754	126.0	1.51e-35	Terminase small subunit	N/A
Pfam	UHGV-1856195_23	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1856195_23	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1856195_23	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1856195_24	K06909	132.6	3.8e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1856195_24	phrog_10250	163.7	0	N/A	unknown function
UniRef90	UHGV-1856195_24	UniRef90_UPI0018A99FCF	619.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1856195_24	476272.RUMHYD_01756	447.0	0	N/A	N/A
Pfam	UHGV-1856195_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1856195_24	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1856195_24	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1856195_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1856195_24	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_25	phrog_64	155.5	0	portal protein	head and packaging
UniRef90	UHGV-1856195_25	UniRef90_UPI001AA0B7FF	496.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1856195_25	673376.F2VHW1_9CAUD	222.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1856195_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1856195_25	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1856195_26	PF10651,NF038186	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1856195_28	411471.SUBVAR_06929	305.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1856195_28	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1856195_29	phrog_37900	309.2	0	N/A	unknown function
UniRef90	UHGV-1856195_29	UniRef90_UPI001C3EA4DF	347.0	0	N/A	N/A
eggNOG-mapper	UHGV-1856195_29	552398.HMPREF0866_03098	246.0	0	N/A	N/A
Pfam	UHGV-1856195_29	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1856195_29	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1856195_29	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_30	phrog_29409	40.9	0.000000000017	N/A	unknown function
KOfam	UHGV-1856195_32	K18454	46.4	0.0000000000005	deaA; chitin disaccharide deacetylase [EC:3.5.1.105]	N/A
PHROG	UHGV-1856195_32	phrog_30034	68.2	1.7e-19	N/A	unknown function
UniRef90	UHGV-1856195_32	UniRef90_A0A1C5VT90	149.0	6.86636e-44	Chitinase A1	N/A
eggNOG-mapper	UHGV-1856195_32	1235796.C815_00903	133.0	2.41e-37	N/A	N/A
Pfam	UHGV-1856195_32	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1856195_32	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_33	phrog_15127	133.2	6.72623e-44	head protein	head and packaging
UniRef90	UHGV-1856195_33	UniRef90_N2BVU1	179.0	2.8026e-45	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1856195_33	1504822.CCNO01000013_gene286	191.0	0	cell adhesion	N/A
Pfam	UHGV-1856195_33	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1856195_33	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1856195_33	COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_34	phrog_5	83.9	2.6e-24	tail completion or Neck1 protein	connector
UniRef90	UHGV-1856195_34	UniRef90_A0A7X5E1T2	183.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1856195_34	1443125.Z962_05620	91.7	5.69e-22	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1856195_34	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1856195_34	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1856195_34	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_35	phrog_194	44.1	0.0000000000037	head scaffolding protein	head and packaging
UniRef90	UHGV-1856195_35	UniRef90_A0A6B9SU02	153.0	1.73761e-43	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-1856195_35	476272.RUMHYD_01775	59.7	0.0000000251	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1856195_35	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_36	phrog_544	132.0	5.6e-39	major head protein	head and packaging
UniRef90	UHGV-1856195_36	UniRef90_A0A1C6B5R0	597.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1856195_36	1232453.BAIF02000011_gene3359	362.0	0	N/A	N/A
Pfam	UHGV-1856195_36	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1856195_36	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_38	phrog_17977	79.1	4.1e-23	N/A	unknown function
UniRef90	UHGV-1856195_38	UniRef90_UPI00141211AB	114.0	9.97e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-1856195_38	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1856195_39	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_40	phrog_885	74.0	1.8e-21	major tail protein	tail
UniRef90	UHGV-1856195_40	UniRef90_A0A843J9F0	212.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1856195_40	1504822.CCNO01000012_gene492	249.0	0	N/A	N/A
structural_annotation	UHGV-1856195_40	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_41	phrog_18646	62.4	8.1e-18	N/A	unknown function
UniRef90	UHGV-1856195_41	UniRef90_B6CXF0	72.0	0.0000000000000746	Peptidase-colicin	N/A
PHROG	UHGV-1856195_43	phrog_6900	269.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1856195_43	1123312.KB904569_gene357	323.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1856195_43	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1856195_43	MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1856195_44	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_45	phrog_13879	188.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1856195_45	1122919.KB905559_gene1344	160.0	1.07e-40	N/A	N/A
structural_annotation	UHGV-1856195_45	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_46	phrog_18725	96.5	2.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-1856195_46	693746.OBV_18220	135.0	2.63e-38	N/A	N/A
Pfam	UHGV-1856195_47	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1856195_47	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-1856195_48	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-1856195_48	COG4447	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1856195_48	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_51	phrog_6918	96.0	2.5e-28	holin	lysis
UniRef90	UHGV-1856195_51	UniRef90_A0A316QCY7	102.0	2.45e-26	Holin	N/A
eggNOG-mapper	UHGV-1856195_51	1297617.JPJD01000020_gene301	101.0	1.71e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1856195_51	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1856195_51	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_52	phrog_14030	137.2	1.10001e-40	N/A	unknown function
UniRef90	UHGV-1856195_52	UniRef90_R6LL81	239.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1856195_52	1121866.AUGK01000003_gene1444	91.7	1.76e-18	amidase activity	N/A
COG	UHGV-1856195_52	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1856195_53	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_54	phrog_3754	97.1	1.8e-28	N/A	unknown function
eggNOG-mapper	UHGV-1856195_54	476272.RUMHYD_01764	164.0	0	N/A	N/A
PHROG	UHGV-1856195_55	phrog_21718	102.8	2.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-1856195_55	397290.C810_05210	63.2	0.000000000292	N/A	N/A
PHROG	UHGV-1856195_56	phrog_22984	72.8	7.5e-22	N/A	unknown function
PHROG	UHGV-1856195_57	phrog_16490	123.4	3e-37	N/A	unknown function
eggNOG-mapper	UHGV-1856195_57	1408437.JNJN01000043_gene803	96.7	2.4e-21	N/A	N/A
PHROG	UHGV-1856195_58	phrog_20016	196.8	0	N/A	unknown function
UniRef90	UHGV-1856195_58	UniRef90_A0A285PT46	192.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1856195_58	1226322.HMPREF1545_00077	174.0	0	N/A	N/A
structural_annotation	UHGV-1856195_58	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1856195_59	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1856195_60	1226322.HMPREF1545_00079	105.0	9.23e-28	N/A	N/A
KOfam	UHGV-1856195_61	K14059	132.9	4.1e-39	int; integrase	N/A
PHROG	UHGV-1856195_61	phrog_1	145.3	5.00264e-43	integrase	integration and excision
UniRef90	UHGV-1856195_61	UniRef90_UPI00195CC1EE	380.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1856195_61	1235835.C814_03141	194.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1856195_61	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1856195_61	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1856195_61	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
KOfam	UHGV-1856195_62	K07729	41.2	0.000000000027	K07729; putative transcriptional regulator	N/A
UniRef90	UHGV-1856195_62	UniRef90_A0A8D9UHA6	89.7	6e-19	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-1856195_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1856195_62	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1856195_62	PF12844	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1856195_64	1280682.AUKA01000018_gene2337	144.0	1.61e-38	N/A	N/A
Pfam	UHGV-1856195_64	PF12773	N/A	N/A	Double zinc ribbon	DZR
structural_annotation	UHGV-1856195_64	PF02805	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_66	phrog_8	43.0	0.0000000000097	transcriptional regulator	transcription regulation
UniRef90	UHGV-1856195_66	UniRef90_UPI001966F1BB	83.6	3.25e-18	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1856195_66	1378168.N510_01712	64.3	0.0000000000817	N/A	N/A
Pfam	UHGV-1856195_66	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1856195_66	PF12844,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1856195_67	UniRef90_A0A1C7FQD9	88.2	1.63e-21	Transcriptional regulator	N/A
Pfam	UHGV-1856195_67	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1856195_67	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1856195_68	UniRef90_UPI000F0633F9	63.5	0.00000000000653	DNA-binding protein	N/A
eggNOG-mapper	UHGV-1856195_68	1235835.C814_03153	76.3	1.23e-17	N/A	N/A
structural_annotation	UHGV-1856195_68	PF09035,NF040990	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1856195_69	760568.Desku_0919	112.0	1.95e-28	N/A	N/A
structural_annotation	UHGV-1856195_69	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1856195_70	NF041247	N/A	N/A	N/A	N/A
PHROG	UHGV-1856195_73	phrog_4433	167.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1856195_73	106648.BBLJ01000054_gene3814	100.0	4.13e-25	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1856195_73	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1856195	Yes	40,722	54	99	1