vOTU vOTU-064148

vOTU: vOTU-064148

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-064148
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00121 → vSUBGEN-26647 → vOTU-064148
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1398073
Biosample ID	SAMEA3136628
Genome length (bp)	38,033 bps
CheckV completeness	99.90% (High-quality)
CDS count	70
CDS density	94.28%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	266	Host agreement	81.58
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	18	Host agreement	94.44

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1398073_1	phrog_1066	126.6	9.7e-38	N/A	unknown function
eggNOG-mapper	UHGV-1398073_1	198094.BA_3788	104.0	2.61e-27	N/A	N/A
structural_annotation	UHGV-1398073_1	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_2	phrog_9	383.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-1398073_2	UniRef90_UPI001D07C789	792.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1398073_2	1203606.HMPREF1526_00981	739.0	0	Terminase	N/A
Pfam	UHGV-1398073_2	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1398073_2	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1398073_2	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1398073_2	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_3	phrog_12	176.6	0	portal protein	head and packaging
UniRef90	UHGV-1398073_3	UniRef90_C4GAS6	501.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1398073_3	626523.GCWU000342_01027	501.0	0	Portal protein	N/A
Pfam	UHGV-1398073_3	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1398073_3	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1398073_3	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1398073_4	K01358	132.9	3.3e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1398073_4	phrog_94	201.4	0	head maturation protease	head and packaging
UniRef90	UHGV-1398073_4	UniRef90_UPI0018979DC8	203.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1398073_4	1280689.AUJC01000011_gene1520	189.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1398073_4	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1398073_4	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1398073_4	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_5	phrog_10	181.1	0	major head protein	head and packaging
UniRef90	UHGV-1398073_5	UniRef90_UPI00189AE5FE	400.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1398073_5	1280689.AUJC01000011_gene1521	384.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1398073_5	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1398073_5	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1398073_5	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1398073_5	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_6	phrog_5223	43.8	0.0000000000034	neck protein	connector
UniRef90	UHGV-1398073_6	UniRef90_E6MGY0	58.5	0.00000000355	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1398073_6	887929.HMP0721_1264	58.5	0.000000000596	N/A	N/A
PHROG	UHGV-1398073_7	phrog_1951	74.8	8e-22	head-tail adaptor	connector
UniRef90	UHGV-1398073_7	UniRef90_A0A1F8UNT5	65.1	0.0000000000123	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-1398073_7	1094508.Tsac_2422	52.4	0.000000225	Phage head-tail joining protein	N/A
Pfam	UHGV-1398073_7	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1398073_7	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1398073_7	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1398073_7	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398073_8	1487921.DP68_11350	58.2	0.00000000157	N/A	N/A
structural_annotation	UHGV-1398073_8	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_9	phrog_5	44.4	0.0000000000036	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1398073_9	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_10	phrog_88	85.2	7.8e-25	major tail protein	tail
UniRef90	UHGV-1398073_10	UniRef90_S0FUN2	114.0	1.33e-28	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1398073_10	1195236.CTER_5106	114.0	2.23e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1398073_10	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1398073_10	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_10	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_11	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_12	phrog_33680	146.6	1.49939e-43	N/A	unknown function
UniRef90	UHGV-1398073_12	UniRef90_A0A2Z4I560	231.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1398073_12	509191.AEDB02000020_gene3249	216.0	0	tail tape measure protein, TP901	N/A
COG	UHGV-1398073_12	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-1398073_12	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_13	phrog_37549	79.9	2.2e-26	virion structural protein	head and packaging
UniRef90	UHGV-1398073_13	UniRef90_A0A3D0W045	229.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1398073_13	1195236.CTER_5103	129.0	1.34e-28	N/A	N/A
structural_annotation	UHGV-1398073_13	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_14	phrog_26795	128.9	1.1e-38	N/A	unknown function
UniRef90	UHGV-1398073_14	UniRef90_A0A5J6T4K8	133.0	5.8e-32	Minor tail protein	N/A
eggNOG-mapper	UHGV-1398073_14	1382315.JPOI01000001_gene271	134.0	1.7e-33	N/A	N/A
structural_annotation	UHGV-1398073_14	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_15	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_16	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398073_17	411471.SUBVAR_06929	303.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1398073_17	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
KOfam	UHGV-1398073_18	K16351	43.6	0.0000000000016	LRRC4, NGL2; netrin-G2 ligand	N/A
PHROG	UHGV-1398073_18	phrog_35892	104.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1398073_18	471875.RUMLAC_02240	147.0	1.7e-36	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-1398073_18	PF13855	N/A	N/A	Leucine rich repeat	LRR_8
Pfam	UHGV-1398073_18	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
NCBIFam	UHGV-1398073_18	TIGR02167.1	N/A	N/A	bacterial surface protein 26-residue repeat	N/A
COG	UHGV-1398073_18	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_18	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_23	phrog_6918	95.2	4.2e-28	holin	lysis
UniRef90	UHGV-1398073_23	UniRef90_A0A316QCY7	102.0	3.48e-26	Holin	N/A
eggNOG-mapper	UHGV-1398073_23	1297617.JPJD01000020_gene301	100.0	2.43e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1398073_23	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1398073_23	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-1398073_24	UniRef90_UPI00164EA432	223.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1398073_24	525254.HMPREF0072_1273	218.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1398073_24	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1398073_24	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_25	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398073_26	1160721.RBI_I00206	53.1	0.0000000139	N/A	N/A
structural_annotation	UHGV-1398073_26	PF10723	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_27	phrog_6160	69.0	6.8e-20	N/A	unknown function
eggNOG-mapper	UHGV-1398073_27	314345.SPV1_06379	95.1	6.15e-20	N/A	N/A
UniRef90	UHGV-1398073_32	UniRef90_A0A8F0WD75	80.9	5.19e-16	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1398073_32	1378168.N510_03079	72.4	0.000000000000401	N/A	N/A
KOfam	UHGV-1398073_33	K06400	252.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1398073_33	phrog_95	264.9	0	integrase	integration and excision
UniRef90	UHGV-1398073_33	UniRef90_G9YSD9	418.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-1398073_33	1408437.JNJN01000002_gene1420	408.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1398073_33	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1398073_33	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1398073_33	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1398073_33	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1398073_33	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-1398073_34	K22299	49.0	0.00000000000014	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
Pfam	UHGV-1398073_34	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1398073_34	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1398073_34	PF13560,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_35	phrog_10292	75.1	3e-22	N/A	unknown function
UniRef90	UHGV-1398073_35	UniRef90_UPI00101CA94E	98.2	1.3e-23	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1398073_35	1198452.Jab_1c20720	82.0	4.16e-18	TM2 domain	N/A
Pfam	UHGV-1398073_35	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-1398073_35	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-1398073_35	COG2314	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398073_36	552398.HMPREF0866_02158	53.9	0.00000342	NOG18738 non supervised orthologous group	N/A
COG	UHGV-1398073_36	COG2169	N/A	N/A	Methylphosphotriester-DNA--protein-cysteine methyltransferase (N-terminal fragment of Ada), contains Zn-binding and two AraC-type DNA-binding domains	N/A
structural_annotation	UHGV-1398073_36	PF02805	N/A	N/A	N/A	N/A
KOfam	UHGV-1398073_38	K18830	55.7	0.0000000000000012	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1398073_38	phrog_8	55.8	7.3e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1398073_38	UniRef90_A0A2U1BEG8	126.0	3.51e-35	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1398073_38	445972.ANACOL_03315	112.0	1.4e-30	N/A	N/A
PADLOC	UHGV-1398073_38	retron_type_VI_hth_cluster2_1	41.4	0.00000000003	N/A	Retron
Pfam	UHGV-1398073_38	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1398073_38	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1398073_38	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398073_44	642492.Clole_0961	68.6	0.0000000000000216	N/A	N/A
structural_annotation	UHGV-1398073_44	PF12286	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_45	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_47	NF041247	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1398073_48	PF05082	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_52	phrog_424	100.2	2.4e-29	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1398073_52	UniRef90_A0A1Q6JI14	353.0	0	Phosphoadenosine phosphosulfate reductase	N/A
eggNOG-mapper	UHGV-1398073_52	1410628.JNKS01000054_gene544	305.0	0	N/A	N/A
Pfam	UHGV-1398073_52	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1398073_52	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1398073_52	PF01507,MF_01161,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_53	phrog_3136	62.4	2.1e-22	N/A	unknown function
COG	UHGV-1398073_53	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
KOfam	UHGV-1398073_54	K00558	142.1	5.60519e-45	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1398073_54	phrog_363	238.8	0	DNA methyltransferase	other
UniRef90	UHGV-1398073_54	UniRef90_UPI00082E0CBC	362.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-1398073_54	742738.HMPREF9460_04053	280.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1398073_54	MTase_II_00058	121.8	3.3e-36	Type II methyltransferase	RM
Pfam	UHGV-1398073_54	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1398073_54	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1398073_54	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1398073_54	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_55	phrog_3136	133.0	1.1e-39	N/A	unknown function
UniRef90	UHGV-1398073_55	UniRef90_A0A843H9M8	99.0	1.36e-22	ASCH domain-containing protein	N/A
COG	UHGV-1398073_55	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1398073_55	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_56	phrog_38832	75.8	2.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-1398073_56	665956.HMPREF1032_00143	76.6	0.0000000000000057	N/A	N/A
PHROG	UHGV-1398073_58	phrog_38832	59.8	2.7e-17	N/A	unknown function
eggNOG-mapper	UHGV-1398073_58	1232443.BAIA02000078_gene48	118.0	2.85e-33	N/A	N/A
PHROG	UHGV-1398073_61	phrog_190	96.5	2.8e-28	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1398073_61	UniRef90_UPI0006C2AC63	120.0	9.21e-32	N/A	N/A
eggNOG-mapper	UHGV-1398073_61	693746.OBV_25250	117.0	1.86e-31	N/A	N/A
Pfam	UHGV-1398073_61	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1398073_61	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-1398073_63	phrog_374	55.6	0.000000000000001	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1398073_63	1423807.BACO01000037_gene1103	66.6	0.00000000000647	N/A	N/A
PHROG	UHGV-1398073_68	phrog_3584	112.9	2.6e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1398073_68	537013.CLOSTMETH_02141	74.3	0.000000000000182	N/A	N/A
structural_annotation	UHGV-1398073_68	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1398073_69	1297617.JPJD01000059_gene2640	87.4	3.2e-20	N/A	N/A
structural_annotation	UHGV-1398073_69	PF06530,TIGR01636	N/A	N/A	N/A	N/A
UniRef90	UHGV-1398073_70	UniRef90_A0A350U006	102.0	9.06e-27	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1398073_70	318464.IO99_13775	90.1	1.29e-22	HNH nucleases	N/A
COG	UHGV-1398073_70	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1398073	Yes	38,033	58	100	1
UHGV-0082613	No	38,033	58	100	1
UHGV-1398075	No	38,033	58	100	1
UHGV-1694433	No	17,439	59	47	1
UHGV-0065075	No	17,362	59	47	1
UHGV-1699646	No	17,362	59	47	1
UHGV-1722004	No	13,025	59	35	1