vOTU vOTU-064544

vOTU: vOTU-064544

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-064544
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00095 → vGENUS-02107 → vSUBGEN-24899 → vOTU-064544
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-2138384
Biosample ID	N/A
Genome length (bp)	37,707 bps
CheckV completeness	97.72% (High-quality)
CDS count	57
CDS density	91.31%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535	Total connections	65	Host agreement	73.85
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Copromonas → Copromonas sp900066535	Total connections	39	Host agreement	82.05

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-2138384_1	K17733	151.0	7.00649e-45	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-2138384_1	phrog_2649	130.9	1.1e-38	endolysin	lysis
UniRef90	UHGV-2138384_1	UniRef90_D7GNX4	488.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
eggNOG-mapper	UHGV-2138384_1	742733.HMPREF9469_01368	356.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
AcrCatalog	UHGV-2138384_1	cluster_9940	81.6	3.57e-21	NA	N/A
Pfam	UHGV-2138384_1	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-2138384_1	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-2138384_1	PF02557,PF19127,MF_01924,NF007557,TIGR04035,COG2173	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_2	phrog_918	132.2	1.1e-39	N/A	unknown function
UniRef90	UHGV-2138384_2	UniRef90_UPI00115A7D93	169.0	0	N/A	N/A
eggNOG-mapper	UHGV-2138384_2	1140001.I571_01827	142.0	2.63444e-43	N/A	N/A
Pfam	UHGV-2138384_2	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-2138384_2	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_3	phrog_355	58.8	8.3e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2138384_3	UniRef90_A0A417BWH3	190.0	0	N/A	N/A
eggNOG-mapper	UHGV-2138384_3	97138.C820_00250	118.0	2.61e-33	N/A	N/A
Pfam	UHGV-2138384_3	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-2138384_3	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_4	phrog_199	56.5	3.4e-16	holin	lysis
UniRef90	UHGV-2138384_4	UniRef90_UPI00115C1583	304.0	0	phage holin family protein	N/A
eggNOG-mapper	UHGV-2138384_4	411460.RUMTOR_02100	163.0	0	N/A	N/A
Pfam	UHGV-2138384_4	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-2138384_4	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
structural_annotation	UHGV-2138384_4	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_5	phrog_19111	52.2	1.8e-21	N/A	unknown function
UniRef90	UHGV-2138384_5	UniRef90_UPI0011582918	554.0	0	fibronectin type III domain-containing protein	N/A
eggNOG-mapper	UHGV-2138384_5	1298920.KI911353_gene4836	116.0	7.59e-26	ATPase involved in DNA repair	N/A
Pfam	UHGV-2138384_5	PF16656	N/A	N/A	Purple acid Phosphatase, N-terminal domain	Pur_ac_phosph_N
COG	UHGV-2138384_5	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
NCBIFam	UHGV-2138384_6	NF040910.1	N/A	N/A	CD1375 family protein	N/A
structural_annotation	UHGV-2138384_6	NF040910	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2138384_7	742740.HMPREF9474_04291	106.0	1.03e-27	N/A	N/A
eggNOG-mapper	UHGV-2138384_9	610130.Closa_0759	63.2	0.0000000285	N/A	N/A
eggNOG-mapper	UHGV-2138384_11	411902.CLOBOL_00122	108.0	4.38e-28	N/A	N/A
PHROG	UHGV-2138384_12	phrog_18725	107.0	1.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-2138384_12	742740.HMPREF9474_03517	197.0	0	N/A	N/A
PHROG	UHGV-2138384_13	phrog_13879	433.0	0	N/A	unknown function
eggNOG-mapper	UHGV-2138384_13	742740.HMPREF9474_03516	998.0	0	N/A	N/A
structural_annotation	UHGV-2138384_13	PF03256,PF16466,PF13550,MF_00813,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_14	phrog_1194	67.2	2.2e-19	N/A	unknown function
eggNOG-mapper	UHGV-2138384_14	742740.HMPREF9474_03515	233.0	0	N/A	N/A
structural_annotation	UHGV-2138384_14	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_15	phrog_1535	440.8	0	tail length tape measure protein	tail
UniRef90	UHGV-2138384_15	UniRef90_A0A174SV65	920.0	0	Phage-like protein	N/A
eggNOG-mapper	UHGV-2138384_15	742740.HMPREF9474_03514	733.0	0	tape measure	N/A
COG	UHGV-2138384_15	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2138384_15	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_16	phrog_8355	102.8	1.1e-30	N/A	unknown function
UniRef90	UHGV-2138384_16	UniRef90_UPI0011579C35	163.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-2138384_16	742740.HMPREF9474_03513	120.0	2.47e-34	N/A	N/A
PHROG	UHGV-2138384_17	phrog_8300	92.8	2.7e-27	N/A	unknown function
eggNOG-mapper	UHGV-2138384_17	742740.HMPREF9474_03512	110.0	3.51e-30	N/A	N/A
structural_annotation	UHGV-2138384_17	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_18	phrog_820	130.9	5.5e-39	major tail protein	tail
eggNOG-mapper	UHGV-2138384_18	742740.HMPREF9474_03511	248.0	0	domain, Protein	N/A
COG	UHGV-2138384_18	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2138384_18	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_19	phrog_2595	82.9	3.2e-24	head-tail connector protein	connector
UniRef90	UHGV-2138384_19	UniRef90_UPI001D068DAC	190.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-2138384_19	483218.BACPEC_01150	180.0	0	N/A	N/A
Pfam	UHGV-2138384_19	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-2138384_19	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_20	phrog_556	65.7	6.5e-19	minor head protein	head and packaging
eggNOG-mapper	UHGV-2138384_20	742740.HMPREF9474_03509	184.0	0	N/A	N/A
PHROG	UHGV-2138384_21	phrog_8710	136.9	5.60001e-41	N/A	unknown function
eggNOG-mapper	UHGV-2138384_21	742740.HMPREF9474_03508	190.0	0	N/A	N/A
structural_annotation	UHGV-2138384_21	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_22	phrog_541	89.8	2.5e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-2138384_22	1304866.K413DRAFT_0783	202.0	0	N/A	N/A
PHROG	UHGV-2138384_23	phrog_1378	73.0	3e-21	N/A	unknown function
eggNOG-mapper	UHGV-2138384_23	1280692.AUJL01000027_gene2159	75.1	1.02e-16	N/A	N/A
PHROG	UHGV-2138384_24	phrog_422	342.7	0	major head protein	head and packaging
UniRef90	UHGV-2138384_24	UniRef90_A0A3R6PT58	521.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-2138384_24	33035.JPJF01000093_gene2252	493.0	0	N/A	N/A
structural_annotation	UHGV-2138384_24	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_25	phrog_2303	152.6	2.8026e-45	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-2138384_25	483218.BACPEC_01156	213.0	0	N/A	N/A
PHROG	UHGV-2138384_26	phrog_581	229.3	0	minor head protein	head and packaging
UniRef90	UHGV-2138384_26	UniRef90_A0A417PTN7	760.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-2138384_26	742740.HMPREF9474_03503	475.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-2138384_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-2138384_26	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-2138384_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2138384_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_27	phrog_25639	127.6	2.4e-38	N/A	unknown function
eggNOG-mapper	UHGV-2138384_27	742740.HMPREF9474_03502	107.0	1.79e-29	N/A	N/A
PHROG	UHGV-2138384_28	phrog_533	287.5	0	portal protein	head and packaging
UniRef90	UHGV-2138384_28	UniRef90_A0A174WUZ7	766.0	0	Phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2138384_28	742740.HMPREF9474_03501	735.0	0	N/A	N/A
structural_annotation	UHGV-2138384_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-2138384_29	K06909	75.9	6.7e-22	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2138384_29	phrog_10250	53.8	0.0000000000000014	N/A	unknown function
UniRef90	UHGV-2138384_29	UniRef90_A0A3R6QNE9	781.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2138384_29	1298920.KI911353_gene4856	722.0	0	Phage terminase, large subunit, PBSX family	N/A
COG	UHGV-2138384_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2138384_29	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-2138384_30	K07474	155.9	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-2138384_30	phrog_51	148.1	4.2039e-44	terminase small subunit	head and packaging
UniRef90	UHGV-2138384_30	UniRef90_UPI0002D1EB65	207.0	0	terminase small subunit	N/A
eggNOG-mapper	UHGV-2138384_30	742740.HMPREF9474_03499	197.0	0	Terminase Small Subunit	N/A
Pfam	UHGV-2138384_30	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-2138384_30	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-2138384_30	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_31	phrog_36	65.1	1.3e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-2138384_31	UniRef90_R6ZAS5	171.0	0	GED domain-containing protein	N/A
eggNOG-mapper	UHGV-2138384_31	411902.CLOBOL_00148	178.0	0	N/A	N/A
structural_annotation	UHGV-2138384_31	PF02996	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_33	phrog_23707	103.9	1.7e-30	N/A	unknown function
UniRef90	UHGV-2138384_33	UniRef90_A0A416Z5W7	152.0	0	Alanine racemase	N/A
eggNOG-mapper	UHGV-2138384_33	411483.FAEPRAA2165_01889	80.1	1.31e-17	N/A	N/A
UniRef90	UHGV-2138384_34	UniRef90_UPI001F178C7B	108.0	4.48e-27	N/A	N/A
UniRef90	UHGV-2138384_35	UniRef90_A0A3R6NW84	322.0	0	N/A	N/A
eggNOG-mapper	UHGV-2138384_35	1256908.HMPREF0373_00667	94.0	4.46e-22	N/A	N/A
Pfam	UHGV-2138384_35	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-2138384_35	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_36	phrog_7566	77.7	9e-23	N/A	unknown function
eggNOG-mapper	UHGV-2138384_36	1235800.C819_00511	187.0	0	N/A	N/A
PHROG	UHGV-2138384_39	phrog_15077	89.4	9.9e-27	N/A	unknown function
UniRef90	UHGV-2138384_39	UniRef90_A0A174WLY0	206.0	0	N/A	N/A
eggNOG-mapper	UHGV-2138384_39	1280698.AUJS01000007_gene1019	202.0	0	N/A	N/A
structural_annotation	UHGV-2138384_39	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_40	phrog_8470	223.2	0	N/A	unknown function
UniRef90	UHGV-2138384_40	UniRef90_UPI001158FAD9	882.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2138384_40	411902.CLOBOL_05697	564.0	0	PcfJ-like protein	N/A
Pfam	UHGV-2138384_40	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-2138384_40	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_41	phrog_4433	52.7	6e-18	N/A	unknown function
eggNOG-mapper	UHGV-2138384_41	411902.CLOBOL_05698	144.0	7.22005e-41	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-2138384_41	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-2138384_41	PF12120,NF000066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2138384_42	411902.CLOBOL_05699	189.0	0	N/A	N/A
KOfam	UHGV-2138384_43	K03733	176.3	0	xerC; integrase/recombinase XerC	N/A
PHROG	UHGV-2138384_43	phrog_1	137.8	1.10001e-40	integrase	integration and excision
UniRef90	UHGV-2138384_43	UniRef90_UPI00115A577A	661.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2138384_43	742740.HMPREF9474_04312	288.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2138384_43	PF13495	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_4
Pfam	UHGV-2138384_43	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2138384_43	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2138384_43	PF00589,PF02899,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_44	phrog_3584	174.4	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-2138384_44	610130.Closa_0713	286.0	0	N/A	N/A
eggNOG-mapper	UHGV-2138384_49	883156.HMPREF9282_01215	62.8	0.000000000365	N/A	N/A
structural_annotation	UHGV-2138384_49	NF040556	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_51	phrog_750	75.1	6.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-2138384_51	742723.HMPREF9477_00931	105.0	3.32e-28	N/A	N/A
structural_annotation	UHGV-2138384_51	PF13835,NF040858	N/A	N/A	N/A	N/A
KOfam	UHGV-2138384_53	K07729	57.0	4.2e-16	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-2138384_53	phrog_3	48.1	0.00000000000048	transcriptional repressor	transcription regulation
UniRef90	UHGV-2138384_53	UniRef90_A0A3R6HP21	100.0	2.16e-26	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2138384_53	1120978.KB894087_gene408	56.2	0.000000000818	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-2138384_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-2138384_53	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-2138384_54	K22299	61.2	2.3e-17	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-2138384_54	UniRef90_A0A3R6K0W0	268.0	0	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-2138384_54	411460.RUMTOR_02056	102.0	1.13e-25	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-2138384_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-2138384_54	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-2138384_54	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_55	phrog_87	95.1	4.7e-28	metallo-protease	other
UniRef90	UHGV-2138384_55	UniRef90_R5G840	270.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-2138384_55	411460.RUMTOR_02055	182.0	0	IrrE N-terminal-like domain	N/A
Pfam	UHGV-2138384_55	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-2138384_55	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-2138384_55	PF06114,COG2856	N/A	N/A	N/A	N/A
UniRef90	UHGV-2138384_56	UniRef90_UPI001D0951D4	292.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-2138384_56	1123263.AUKY01000072_gene2115	230.0	0	N/A	N/A
structural_annotation	UHGV-2138384_56	PF13424,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-2138384_57	phrog_29304	94.9	4.4e-28	N/A	unknown function
UniRef90	UHGV-2138384_57	UniRef90_UPI0010631ACC	121.0	1.54e-34	type II toxin-antitoxin system MqsA family antitoxin	N/A
eggNOG-mapper	UHGV-2138384_57	658086.HMPREF0994_03191	117.0	8.64e-34	N/A	N/A
NCBIFam	UHGV-2138384_57	TIGR03831.1	N/A	N/A	YgiT-type zinc finger protein	N/A
structural_annotation	UHGV-2138384_57	PF14122,TIGR03829	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2138384	Yes	37,707	47	98	1
UHGV-1284205	No	36,583	48	95	1
UHGV-1520469	No	35,840	47	93	1
UHGV-1525170	No	25,862	47	67	1
UHGV-0013970	No	21,564	48	56	1
UHGV-0045349	No	13,180	49	33	1
UHGV-1629306	No	13,180	49	33	1