vOTU vOTU-064807

vOTU: vOTU-064807

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-064807
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00213 → vGENUS-00391 → vSUBGEN-17753 → vOTU-064807
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0183512
Biosample ID	N/A
Genome length (bp)	39,075 bps
CheckV completeness	91.60% (High-quality)
CDS count	57
CDS density	91.51%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	72	Host agreement	77.78
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp000435555	Total connections	12	Host agreement	91.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.6)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0183512_1	phrog_15768	75.5	9.9e-22	N/A	unknown function
eggNOG-mapper	UHGV-0183512_1	203119.Cthe_2466	83.6	2.28e-17	N/A	N/A
PHROG	UHGV-0183512_3	phrog_190	110.3	1.6e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0183512_3	UniRef90_A0A8D9PDD6	275.0	0	Endonuclease	N/A
eggNOG-mapper	UHGV-0183512_3	862517.HMPREF9225_1657	84.3	3.59e-19	N/A	N/A
Pfam	UHGV-0183512_3	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0183512_3	PF06356	N/A	N/A	N/A	N/A
KOfam	UHGV-0183512_4	K00571	106.1	3.5e-31	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0183512_4	phrog_23224	186.5	0	DNA methyltransferase	other
UniRef90	UHGV-0183512_4	UniRef90_A0A2V2GM11	342.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0183512_4	718252.FP2_06750	342.0	0	DNA methylase	N/A
PADLOC	UHGV-0183512_4	MTase_II_00172	90.2	6.2e-28	Type II methyltransferase	RM
Pfam	UHGV-0183512_4	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0183512_4	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0183512_4	PF01555,NF010253,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0183512_6	K00390	56.7	1.3e-16	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0183512_6	phrog_424	118.2	7e-35	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0183512_6	UniRef90_A0A1H7KWC5	305.0	0	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase	N/A
eggNOG-mapper	UHGV-0183512_6	665956.HMPREF1032_00140	270.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0183512_6	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0183512_6	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0183512_6	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183512_11	PF06003,MF_01354,TIGR00739,COG5475	N/A	N/A	N/A	N/A
KOfam	UHGV-0183512_12	K22299	47.4	0.00000000000045	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0183512_12	phrog_8	64.7	2e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0183512_12	UniRef90_A0A8D9PDC4	152.0	0	Repressor protein	N/A
eggNOG-mapper	UHGV-0183512_12	1226322.HMPREF1545_00039	79.0	1.69e-18	sequence-specific DNA binding	N/A
Pfam	UHGV-0183512_12	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0183512_12	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0183512_12	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183512_13	UniRef90_A0A8D9PDT2	203.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-0183512_13	1226322.HMPREF1545_00042	142.0	5.12034e-42	N/A	N/A
structural_annotation	UHGV-0183512_13	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0183512_14	K06909	117.3	1.6e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0183512_14	phrog_979	194.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-0183512_14	UniRef90_A0A8D9PDR5	1014.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0183512_14	1321782.HMPREF1986_00343	618.0	0	N/A	N/A
Pfam	UHGV-0183512_14	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0183512_14	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0183512_14	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_15	phrog_156	328.5	0	portal protein	head and packaging
UniRef90	UHGV-0183512_15	UniRef90_A0A8D9UH10	1239.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0183512_15	748224.HMPREF9436_01396	538.0	0	N/A	N/A
structural_annotation	UHGV-0183512_15	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183512_16	UniRef90_A0A8D9PDR6	191.0	0	YsxB-like protein	N/A
Pfam	UHGV-0183512_16	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
structural_annotation	UHGV-0183512_16	NF011128,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_17	phrog_13908	308.1	0	N/A	unknown function
UniRef90	UHGV-0183512_17	UniRef90_A0A844DRV7	119.0	9.87e-27	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0183512_17	1410650.JHWL01000003_gene2831	122.0	1.42e-29	N/A	N/A
PHROG	UHGV-0183512_18	phrog_1357	259.9	0	major head protein	head and packaging
UniRef90	UHGV-0183512_18	UniRef90_A0A8D9UH64	796.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0183512_18	1449126.JQKL01000003_gene1695	456.0	0	N/A	N/A
Pfam	UHGV-0183512_18	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0183512_18	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0183512_18	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_19	phrog_15239	87.4	7.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0183512_19	1449126.JQKL01000003_gene1694	51.2	0.00000256	N/A	N/A
PHROG	UHGV-0183512_20	phrog_35419	55.9	8.6e-16	tail fiber protein	tail
eggNOG-mapper	UHGV-0183512_20	1127515.H9C0P1_9CAUD	65.9	0.00000000423	N/A	N/A
structural_annotation	UHGV-0183512_20	PF10651,NF033814	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_21	phrog_15594	59.5	5.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0183512_21	1118055.CAGU01000013_gene763	50.8	0.000000857	N/A	N/A
structural_annotation	UHGV-0183512_21	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_23	phrog_13589	163.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0183512_23	428125.CLOLEP_01434	199.0	0	N/A	N/A
PHROG	UHGV-0183512_25	phrog_2295	44.3	0.000000000000023	N/A	unknown function
Pfam	UHGV-0183512_25	PF21722	N/A	N/A	Glycine-rich domain	Gly_rich_2
structural_annotation	UHGV-0183512_25	PF21722	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_29	phrog_2310	59.0	4.5e-17	N/A	unknown function
eggNOG-mapper	UHGV-0183512_29	1151292.QEW_0364	51.2	0.0000000338	N/A	N/A
PHROG	UHGV-0183512_31	phrog_4105	101.0	6.9e-30	N/A	unknown function
UniRef90	UHGV-0183512_31	UniRef90_A0A8D9UHA9	186.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0183512_31	411460.RUMTOR_01326	143.0	2.85865e-43	N/A	N/A
PHROG	UHGV-0183512_32	phrog_881	76.4	2.3e-22	holin	lysis
UniRef90	UHGV-0183512_32	UniRef90_A0A8D9PDR9	82.0	3.76e-19	Holin	N/A
eggNOG-mapper	UHGV-0183512_32	742740.HMPREF9474_02251	73.9	9.5e-17	Putative phage holin Dp-1	N/A
Pfam	UHGV-0183512_32	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0183512_32	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_33	phrog_435	63.7	3.4e-18	endolysin	lysis
UniRef90	UHGV-0183512_33	UniRef90_A0A8D9PDS4	415.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-0183512_33	1226322.HMPREF1545_01953	92.4	9.58e-20	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0183512_33	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0183512_33	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0183512_33	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_34	phrog_12105	91.0	3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0183512_34	1519439.JPJG01000060_gene1891	63.5	0.0000000000259	N/A	N/A
PHROG	UHGV-0183512_35	phrog_511	223.8	0	internal virion protein	head and packaging
UniRef90	UHGV-0183512_35	UniRef90_A0A8D9UH72	923.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0183512_35	1226322.HMPREF1545_00785	308.0	0	N/A	N/A
structural_annotation	UHGV-0183512_35	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183512_36	UniRef90_A0A8D9UGT1	134.0	2.19e-38	Sigma C capsid protein	N/A
eggNOG-mapper	UHGV-0183512_37	1410650.JHWL01000003_gene2815	65.5	0.00000000457	N/A	N/A
PHROG	UHGV-0183512_38	phrog_22978	834.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0183512_38	1410650.JHWL01000003_gene2814	286.0	0	N/A	N/A
PHROG	UHGV-0183512_39	phrog_3754	94.2	1.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-0183512_39	476272.RUMHYD_01764	162.0	0	N/A	N/A
PHROG	UHGV-0183512_40	phrog_21718	102.6	3.7e-30	N/A	unknown function
eggNOG-mapper	UHGV-0183512_40	397290.C810_05210	71.6	0.000000000000118	N/A	N/A
PHROG	UHGV-0183512_41	phrog_22984	76.2	3.7e-22	N/A	unknown function
PHROG	UHGV-0183512_42	phrog_16490	132.9	1.6e-39	N/A	unknown function
eggNOG-mapper	UHGV-0183512_42	1408437.JNJN01000043_gene803	150.0	5.86023e-42	N/A	N/A
PHROG	UHGV-0183512_43	phrog_20016	182.9	0	N/A	unknown function
UniRef90	UHGV-0183512_43	UniRef90_A0A285PT46	186.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0183512_43	1226322.HMPREF1545_00077	168.0	0	N/A	N/A
structural_annotation	UHGV-0183512_43	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0183512_44	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0183512_45	K14059	210.9	0	int; integrase	N/A
PHROG	UHGV-0183512_45	phrog_1	184.1	0	integrase	integration and excision
UniRef90	UHGV-0183512_45	UniRef90_U2QJL8	448.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0183512_45	1226322.HMPREF1545_00144	448.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0183512_45	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0183512_45	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0183512_45	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183512_46	UniRef90_A0A8D9UHA6	83.2	2.75e-17	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0183512_46	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0183512_46	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0183512_47	UniRef90_A0A8D9PDV2	152.0	0	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-0183512_47	1226325.HMPREF1548_05412	66.2	0.00000000000438	Peptidoglycan-binding domain 1 protein	N/A
COG	UHGV-0183512_47	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
UniRef90	UHGV-0183512_48	UniRef90_A0A8D9PDV1	142.0	3.15993e-42	Glycophorin A	N/A
KOfam	UHGV-0183512_49	K07727	41.3	0.000000000036	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0183512_49	UniRef90_A0A396L935	52.0	0.00000685	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0183512_49	658659.HMPREF0983_03304	61.6	0.000000000381	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0183512_49	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0183512_49	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0183512_50	UniRef90_UPI001C38B35F	52.8	0.000000141	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0183512_50	558169.AGAV01000008_gene736	46.6	0.00000631	N/A	N/A
Pfam	UHGV-0183512_50	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0183512_50	PF21291,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0183512_51	K07741	216.8	0	antB; anti-repressor protein	N/A
PHROG	UHGV-0183512_51	phrog_63	177.5	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0183512_51	UniRef90_UPI001379CF69	322.0	0	phage antirepressor KilAC domain-containing protein	N/A
eggNOG-mapper	UHGV-0183512_51	1232443.BAIA02000079_gene53	308.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-0183512_51	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0183512_51	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0183512_51	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-0183512_51	PF03374,PF08346,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_55	phrog_22529	46.8	0.00000000000032	N/A	unknown function
UniRef90	UHGV-0183512_55	UniRef90_A0A8D9UHA1	306.0	0	3D containing protein	N/A
COG	UHGV-0183512_55	COG3584	N/A	N/A	3D (Asp-Asp-Asp) domain, usually in lytic transglycosylases	N/A
structural_annotation	UHGV-0183512_55	COG3584	N/A	N/A	N/A	N/A
PHROG	UHGV-0183512_57	phrog_4433	163.1	0	N/A	unknown function
UniRef90	UHGV-0183512_57	UniRef90_A0A6M5C839	106.0	8.1e-26	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0183512_57	106648.BBLJ01000054_gene3814	100.0	8.34e-25	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0183512_57	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0183512	Yes	39,075	58	92	1
UHGV-0209255	No	16,082	59	38	1