vOTU vOTU-064958

vOTU: vOTU-064958

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-064958
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Taxonomy (UHGV)	vFAM-00008 → vSUBFAM-00325 → vGENUS-00319 → vSUBGEN-00556 → vOTU-064958
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0019549
Biosample ID	SAMEA4766056
Genome length (bp)	41,886 bps
CheckV completeness	99.90% (High-quality)
CDS count	54
CDS density	93.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	219	Host agreement	96.8
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium_A	Total connections	45	Host agreement	95.56

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0019549_1	UniRef90_A0A7M1RS47	90.5	2.94e-20	RNA polymerase sigma factor/ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0019549_1	1378168.N510_03079	62.4	0.00000000161	N/A	N/A
structural_annotation	UHGV-0019549_2	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0019549_7	UniRef90_A0A316S6W0	92.4	5.67e-23	HTH luxR-type domain-containing protein	N/A
Pfam	UHGV-0019549_7	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
COG	UHGV-0019549_7	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-0019549_7	PF08281,MF_00674,NF001073,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_10	phrog_774	64.7	1.7e-18	N/A	unknown function
eggNOG-mapper	UHGV-0019549_10	397290.C810_05225	80.5	1.76e-18	N/A	N/A
eggNOG-mapper	UHGV-0019549_11	1392502.JNIO01000008_gene1280	227.0	0	N/A	N/A
structural_annotation	UHGV-0019549_11	PF21277	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_12	phrog_918	101.8	3e-30	N/A	unknown function
UniRef90	UHGV-0019549_12	UniRef90_UPI000EC62F11	155.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019549_12	537007.BLAHAN_05515	142.0	3.82554e-43	N/A	N/A
Pfam	UHGV-0019549_12	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-0019549_12	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_14	phrog_4105	82.3	4.4e-24	N/A	unknown function
eggNOG-mapper	UHGV-0019549_14	33035.JPJF01000043_gene996	74.3	0.00000000000000139	N/A	N/A
PHROG	UHGV-0019549_15	phrog_1141	64.4	1.7e-18	tail fiber protein	tail
UniRef90	UHGV-0019549_15	UniRef90_A0A3C1IQ26	176.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019549_15	1217710.F969_02498	56.6	0.000000118	N/A	N/A
Pfam	UHGV-0019549_15	PF14301	N/A	N/A	N/A	DUF4376
structural_annotation	UHGV-0019549_15	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_18	phrog_1640	75.2	3.6e-22	tail protein	tail
eggNOG-mapper	UHGV-0019549_18	343516.Q286Z3_9CAUD	67.4	0.00000000866	outer membrane	N/A
structural_annotation	UHGV-0019549_18	PF03906	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_19	phrog_9880	398.3	0	N/A	unknown function
UniRef90	UHGV-0019549_19	UniRef90_D1YMD8	650.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0019549_19	568816.Acin_1824	753.0	0	N/A	N/A
UniRef90	UHGV-0019549_20	UniRef90_A0A1B3X2T2	189.0	0	NlpC/P60 domain-containing protein	N/A
eggNOG-mapper	UHGV-0019549_20	1401067.HMPREF0872_06760	82.8	0.00000000000019	N/A	N/A
structural_annotation	UHGV-0019549_20	PF01464,COG0741	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_21	phrog_418	54.6	0.0000000000000018	internal virion protein	head and packaging
structural_annotation	UHGV-0019549_21	TIGR02971	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_22	phrog_308	83.9	1.9e-24	internal virion protein	head and packaging
UniRef90	UHGV-0019549_22	UniRef90_A0A3A5L1J5	75.9	0.0000000000000203	N/A	N/A
eggNOG-mapper	UHGV-0019549_22	585503.HMPREF7545_1741	109.0	2.28e-28	N/A	N/A
structural_annotation	UHGV-0019549_22	PF11039,MF_02210,NF011709,COG1247	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_23	phrog_376	512.5	0	tail protein	tail
UniRef90	UHGV-0019549_23	UniRef90_A0A0U1KV93	416.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019549_23	585503.HMPREF7545_1740	639.0	0	N/A	N/A
structural_annotation	UHGV-0019549_23	PF11134,MF_00923,TIGR03300,COG2706	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_24	phrog_394	172.1	0	tail protein	tail
UniRef90	UHGV-0019549_24	UniRef90_A0A8B2QU77	229.0	0	Tail tube protein	N/A
eggNOG-mapper	UHGV-0019549_24	585503.HMPREF7545_1739	176.0	0	N/A	N/A
structural_annotation	UHGV-0019549_24	PF17212	N/A	N/A	N/A	N/A
Pfam	UHGV-0019549_25	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
structural_annotation	UHGV-0019549_25	PF12949	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_26	phrog_427	42.5	0.00000000001	N/A	unknown function
eggNOG-mapper	UHGV-0019549_26	585503.HMPREF7545_1737	111.0	6.95e-30	N/A	N/A
structural_annotation	UHGV-0019549_26	PF21190,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_27	phrog_212	103.3	0	major head protein	head and packaging
UniRef90	UHGV-0019549_27	UniRef90_A0A0U1KVA9	300.0	0	N/A	N/A
eggNOG-mapper	UHGV-0019549_27	585503.HMPREF7545_1736	387.0	0	N/A	N/A
Pfam	UHGV-0019549_27	PF20911	N/A	N/A	Major capsid protein GP7	GP7
structural_annotation	UHGV-0019549_27	PF20911,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_28	phrog_458	85.3	7.8e-25	protease	other
UniRef90	UHGV-0019549_28	UniRef90_A0A6J5NV41	77.8	0.000000000000031	Putative protease	N/A
eggNOG-mapper	UHGV-0019549_28	585503.HMPREF7545_1735	147.0	6.96025e-42	N/A	N/A
PHROG	UHGV-0019549_30	phrog_332	418.3	0	head-tail adaptor	connector
UniRef90	UHGV-0019549_30	UniRef90_A0A8B2QMC7	672.0	0	Head-to-tail connecting protein	N/A
eggNOG-mapper	UHGV-0019549_30	585503.HMPREF7545_1733	561.0	0	Bacteriophage head to tail connecting protein	N/A
Pfam	UHGV-0019549_30	PF12236	N/A	N/A	Bacteriophage head to tail connecting protein	Head-tail_con
structural_annotation	UHGV-0019549_30	PF12236,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0019549_32	K06909	53.3	0.000000000000004	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0019549_32	phrog_5902	256.2	0	N/A	unknown function
UniRef90	UHGV-0019549_32	UniRef90_A0A1B1I1J7	568.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0019549_32	1200557.JHWV01000001_gene277	567.0	0	Terminase RNaseH-like domain	N/A
COG	UHGV-0019549_32	COG0507	N/A	N/A	ATPase/5'-3' helicase helicase subunit RecD of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0019549_32	PF03237,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0019549_33	K07474	90.3	4.7e-26	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0019549_33	phrog_51	81.3	1.1e-23	terminase small subunit	head and packaging
UniRef90	UHGV-0019549_33	UniRef90_A0A8B2QP55	91.3	8.19e-21	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0019549_33	1160721.RBI_II00483	68.9	0.000000000000862	DNA packaging	N/A
Pfam	UHGV-0019549_33	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0019549_33	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0019549_33	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_35	phrog_3584	204.0	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0019549_35	642492.Clole_0725	164.0	0	N/A	N/A
structural_annotation	UHGV-0019549_35	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-0019549_37	phrog_1672	48.6	0.000000000000091	N/A	unknown function
KOfam	UHGV-0019549_40	K03497	158.4	0	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0019549_40	phrog_6218	240.5	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0019549_40	UniRef90_A0A1Y4WCX6	303.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-0019549_40	394503.Ccel_3306	231.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0019549_40	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0019549_40	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0019549_40	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-0019549_40	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
Pfam	UHGV-0019549_43	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0019549_43	PF12957	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0019549_48	PF13033	N/A	N/A	N/A	N/A
KOfam	UHGV-0019549_51	K22300	62.1	1.4e-17	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0019549_51	phrog_8	55.1	0.0000000000000014	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019549_51	UniRef90_R6X1Y8	126.0	4.67e-35	Helix-turn-helix domain protein	N/A
eggNOG-mapper	UHGV-0019549_51	642492.Clole_0718	81.6	2.96e-18	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0019549_51	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0019549_51	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0019549_51	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0019549_52	K18830	58.6	1.5e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0019549_52	phrog_8	57.6	3.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0019549_52	UniRef90_B0N8N2	70.1	0.000000000000252	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0019549_52	445974.CLORAM_02966	70.1	0.0000000000000423	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0019549_52	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0019549_52	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0019549_52	PF12844,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0019549_53	K07448	51.7	0.000000000000012	mrr; restriction system protein	N/A
UniRef90	UHGV-0019549_53	UniRef90_A0A1I0EL90	286.0	0	Restriction endonuclease	N/A
eggNOG-mapper	UHGV-0019549_53	1150621.SMUL_1164	67.8	0.000000000546	Restriction endonuclease	N/A
Pfam	UHGV-0019549_53	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
structural_annotation	UHGV-0019549_53	PF04471,MF_00722,NF002876,COG1787	N/A	N/A	N/A	N/A
KOfam	UHGV-0019549_54	K06400	380.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0019549_54	phrog_95	369.0	0	integrase	integration and excision
UniRef90	UHGV-0019549_54	UniRef90_E8LBZ4	427.0	0	Resolvase, N-terminal domain protein	N/A
eggNOG-mapper	UHGV-0019549_54	626939.HMPREF9443_00357	427.0	0	overlaps another CDS with the same product name	N/A
Pfam	UHGV-0019549_54	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0019549_54	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0019549_54	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0019549_54	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0019549_54	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0019549	Yes	41,886	46	100	1