vOTU vOTU-065272

vOTU: vOTU-065272

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-065272
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-00143 → vGENUS-00097 → vSUBGEN-00058 → vOTU-065272
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Holdemanella
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0172186
Biosample ID	SAMN09781788
Genome length (bp)	38,074 bps
CheckV completeness	96.10% (High-quality)
CDS count	57
CDS density	92.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Erysipelotrichaceae → Holdemanella	Total connections	132	Host agreement	91.67
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 96.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0172186_1	UniRef90_UPI001E2BB5D0	80.9	3.11e-17	minor capsid protein	N/A
structural_annotation	UHGV-0172186_1	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_3	phrog_212	239.1	0	major head protein	head and packaging
UniRef90	UHGV-0172186_3	UniRef90_UPI00189A455D	513.0	0	phage capsid protein	N/A
eggNOG-mapper	UHGV-0172186_3	552396.HMPREF0863_00277	372.0	0	N/A	N/A
structural_annotation	UHGV-0172186_3	PF05065,MF_04119,NF041162,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_4	phrog_194	99.8	3.5e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0172186_4	UniRef90_UPI001D0A686C	334.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0172186_4	1232449.BAHV02000010_gene2713	105.0	4.24e-26	N/A	N/A
Pfam	UHGV-0172186_4	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0172186_4	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_6	phrog_581	274.8	0	minor head protein	head and packaging
UniRef90	UHGV-0172186_6	UniRef90_UPI001D0B3D9B	723.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0172186_6	552396.HMPREF0863_00280	264.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0172186_6	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0172186_6	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172186_6	PF06152,PF03496,MF_04139,NF041404	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_7	phrog_533	259.2	0	portal protein	head and packaging
UniRef90	UHGV-0172186_7	UniRef90_UPI001430A874	570.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0172186_7	552396.HMPREF0863_00281	476.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0172186_7	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0172186_8	K06909	84.4	1.7e-24	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0172186_8	phrog_2	105.6	8.8e-31	terminase large subunit	head and packaging
UniRef90	UHGV-0172186_8	UniRef90_UPI001D0AA0D4	836.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0172186_8	552396.HMPREF0863_00282	471.0	0	DNA packaging	N/A
Pfam	UHGV-0172186_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0172186_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0172186_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_9	phrog_2412	64.2	2.8e-18	N/A	unknown function
UniRef90	UHGV-0172186_9	UniRef90_UPI000427CABE	59.7	0.0000000257	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-0172186_9	1232449.BAHV02000018_gene1532	70.1	0.000000000000703	N/A	N/A
KOfam	UHGV-0172186_10	K07319	132.9	3.3e-39	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0172186_10	phrog_498	450.7	0	DNA methyltransferase	other
UniRef90	UHGV-0172186_10	UniRef90_UPI001D0A8584	873.0	0	DNA modification methylase	N/A
eggNOG-mapper	UHGV-0172186_10	521003.COLINT_02335	434.0	0	DNA methylase	N/A
PADLOC	UHGV-0172186_10	MTase_II_00015	256.3	0	Type II methyltransferase	RM
Pfam	UHGV-0172186_10	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-0172186_10	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0172186_10	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0172186_10	PF01555,PF02195,MF_02015,MF_01872,NF010253,TIGR04285,COG0863,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172186_11	TIGR01637	N/A	N/A	N/A	N/A
KOfam	UHGV-0172186_12	K14440	130.0	1.4e-39	SMARCAL1, HARP; SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A-like protein 1 [EC:5.6.2.-]	N/A
PHROG	UHGV-0172186_12	phrog_62	395.0	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172186_12	UniRef90_UPI001E5F6A13	894.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0172186_12	552396.HMPREF0863_00284	541.0	0	SNF2 family N-terminal domain	N/A
PADLOC	UHGV-0172186_12	ZorD1_00007	100.4	2.1e-29	SWI2/SNF2 helicase, Mrr-like nuclease	Zorya
Pfam	UHGV-0172186_12	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0172186_12	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0172186_12	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0172186_12	PF13872,PF16203,MF_01821,NF041790,COG0553	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_13	phrog_93	71.3	1.5e-20	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172186_13	UniRef90_UPI00189BA373	209.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0172186_13	1122146.AUHP01000010_gene1025	94.4	6.88e-24	VRR_NUC	N/A
structural_annotation	UHGV-0172186_13	PF01870,MF_00130,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_15	phrog_2245	75.4	8.6e-22	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0172186_15	UniRef90_A0A413KAN3	65.5	0.0000000000168	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-0172186_15	1680.BADO_1259	58.9	0.000000000908	N/A	N/A
structural_annotation	UHGV-0172186_15	PF12643,MF_01020,TIGR03188,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_16	phrog_256	996.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172186_16	UniRef90_UPI001D0A1C03	1503.0	0	virulence-associated E family protein	N/A
eggNOG-mapper	UHGV-0172186_16	552396.HMPREF0863_00286	901.0	0	N/A	N/A
Pfam	UHGV-0172186_16	PF05272	N/A	N/A	Virulence-associated protein E-like domain	VapE-like_dom
COG	UHGV-0172186_16	COG5545	N/A	N/A	Predicted P-loop ATPase and inactivated derivatives	N/A
structural_annotation	UHGV-0172186_16	PF05272,MF_04000,NF005477,NF040562,COG5545	N/A	N/A	N/A	N/A
KOfam	UHGV-0172186_19	K02334	799.4	0	dpo; DNA polymerase bacteriophage-type [EC:2.7.7.7]	N/A
PHROG	UHGV-0172186_19	phrog_17	395.9	0	DNA polymerase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172186_19	UniRef90_UPI001D0A031A	1327.0	0	DNA polymerase	N/A
eggNOG-mapper	UHGV-0172186_19	552396.HMPREF0863_00289	617.0	0	DNA polymerase	N/A
Pfam	UHGV-0172186_19	PF00476	N/A	N/A	DNA polymerase family A	DNA_pol_A
COG	UHGV-0172186_19	COG0749	N/A	N/A	DNA polymerase I, 3'-5' exonuclease and polymerase domains	N/A
structural_annotation	UHGV-0172186_19	PF00476,MF_04101,NF011540,COG0749	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_20	phrog_112	142.5	2.90069e-42	Gp2.5-like ssDNA binding protein and ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172186_20	UniRef90_UPI001D0AB63B	400.0	0	N/A	N/A
eggNOG-mapper	UHGV-0172186_20	552396.HMPREF0863_00290	145.0	4.82005e-41	N/A	N/A
Pfam	UHGV-0172186_20	PF10991	N/A	N/A	Enterobacter phage Enc34, ssDNA-binding protein	Enc34_ssDNA-bd
structural_annotation	UHGV-0172186_20	PF10991,MF_04153	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_21	phrog_69	328.8	0	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0172186_21	UniRef90_UPI001D0AE809	709.0	0	N/A	N/A
eggNOG-mapper	UHGV-0172186_21	1235796.C815_00944	345.0	0	N/A	N/A
Pfam	UHGV-0172186_21	PF10926	N/A	N/A	N/A	DUF2800
COG	UHGV-0172186_21	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0172186_21	PF10926,MF_03030,TIGR00372,COG2887	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172186_24	PF06786	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172186_25	NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_27	phrog_585	40.3	0.000000000055	N/A	unknown function
UniRef90	UHGV-0172186_27	UniRef90_UPI0018980CB0	209.0	0	N/A	N/A
Pfam	UHGV-0172186_27	PF10711	N/A	N/A	N/A	DUF2513
KOfam	UHGV-0172186_31	K18830	57.4	4e-16	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0172186_31	phrog_8	45.4	0.00000000000048	transcriptional regulator	transcription regulation
UniRef90	UHGV-0172186_31	UniRef90_UPI00189831EE	142.0	1.70006e-41	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0172186_31	525254.HMPREF0072_0267	83.6	3.18e-19	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0172186_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0172186_31	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0172186_31	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_32	phrog_2967	45.1	0.0000000000016	transcriptional regulator	transcription regulation
UniRef90	UHGV-0172186_32	UniRef90_UPI001D09EDED	377.0	0	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0172186_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0172186_32	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0172186_32	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
KOfam	UHGV-0172186_33	K14059	224.6	0	int; integrase	N/A
PHROG	UHGV-0172186_33	phrog_1	210.9	0	integrase	integration and excision
UniRef90	UHGV-0172186_33	UniRef90_UPI00189BAE2B	735.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0172186_33	1095750.HMPREF9970_0588	173.0	0	Arm DNA-binding domain	N/A
Pfam	UHGV-0172186_33	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0172186_33	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0172186_33	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0172186_33	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0172186_33	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0172186_35	K22299	41.7	0.000000000027	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
UniRef90	UHGV-0172186_35	UniRef90_UPI001D0A947F	204.0	0	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-0172186_35	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0172186_35	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0172186_35	PF13443,MF_02017,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172186_37	PF19824,TIGR03090	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_38	phrog_1863	40.4	0.000000000024	N/A	unknown function
PHROG	UHGV-0172186_39	phrog_443	60.0	7.4e-17	holin	lysis
UniRef90	UHGV-0172186_39	UniRef90_UPI001896A9B9	131.0	1.09e-38	holin	N/A
eggNOG-mapper	UHGV-0172186_39	1125712.HMPREF1316_2355	77.0	6.38e-18	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0172186_39	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0172186_39	PF16945	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0172186_40	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_41	phrog_16490	44.9	0.00000000000024	N/A	unknown function
eggNOG-mapper	UHGV-0172186_41	1235790.C805_00060	66.2	0.000000000221	N/A	N/A
PHROG	UHGV-0172186_42	phrog_22984	44.9	0.0000000000023	N/A	unknown function
PHROG	UHGV-0172186_43	phrog_21718	54.7	0.0000000000000018	N/A	unknown function
UniRef90	UHGV-0172186_43	UniRef90_A0A8D9PDT7	53.1	0.000000843	Membrane fusogenic activity protein	N/A
eggNOG-mapper	UHGV-0172186_43	476272.RUMHYD_01768	54.3	0.000000166	N/A	N/A
PHROG	UHGV-0172186_45	phrog_11037	78.7	6.9e-23	N/A	unknown function
UniRef90	UHGV-0172186_45	UniRef90_UPI001D0AE32A	583.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0172186_45	428127.EUBDOL_01569	278.0	0	N/A	N/A
Pfam	UHGV-0172186_45	PF08460	N/A	N/A	Bacterial SH3 domain	SH3_5
structural_annotation	UHGV-0172186_45	PF08460,PF01551,NF040883,NF033202,COG0739,COG4991	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_46	phrog_134	65.8	4.9e-19	N/A	unknown function
UniRef90	UHGV-0172186_46	UniRef90_A0A373VIX2	57.4	0.000000000446	XkdX family protein	N/A
Pfam	UHGV-0172186_46	PF09693	N/A	N/A	Phage uncharacterised protein (Phage_XkdX)	Phage_XkdX
NCBIFam	UHGV-0172186_46	TIGR01669.1	N/A	N/A	XkdX family protein	N/A
structural_annotation	UHGV-0172186_46	PF09693,TIGR01669	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_47	phrog_24451	97.6	9.7e-29	N/A	unknown function
eggNOG-mapper	UHGV-0172186_47	931276.Cspa_c10290	79.3	1.23e-17	N/A	N/A
PHROG	UHGV-0172186_48	phrog_4492	52.8	0.0000000000000025	tail fiber protein	tail
eggNOG-mapper	UHGV-0172186_48	756499.Desde_1105	61.6	0.000000117	N/A	N/A
structural_annotation	UHGV-0172186_48	PF03425,NF033675	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_50	phrog_24103	87.8	2.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0172186_50	742735.HMPREF9467_00719	86.7	4.39e-18	N/A	N/A
PHROG	UHGV-0172186_52	phrog_15594	80.0	2.6e-23	N/A	unknown function
eggNOG-mapper	UHGV-0172186_52	1118055.CAGU01000013_gene763	63.2	0.0000000000111	N/A	N/A
structural_annotation	UHGV-0172186_52	PF16640,TIGR04488	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_53	phrog_9534	109.9	3.4e-32	head protein	head and packaging
eggNOG-mapper	UHGV-0172186_53	665956.HMPREF1032_02939	80.5	0.00000000000000198	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0172186_54	phrog_538	104.5	8.8e-38	minor tail protein	tail
UniRef90	UHGV-0172186_54	UniRef90_UPI00189C3ED1	660.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0172186_54	428127.EUBDOL_01212	209.0	0	N/A	N/A
Pfam	UHGV-0172186_54	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0172186_54	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_55	phrog_36410	64.6	1e-18	N/A	unknown function
UniRef90	UHGV-0172186_55	UniRef90_UPI001897DDB7	550.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0172186_55	428127.EUBDOL_01213	195.0	0	phage tail	N/A
COG	UHGV-0172186_55	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0172186_55	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_56	phrog_1686	248.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0172186_56	UniRef90_UPI001D0A3DB9	1135.0	0	tape measure protein	N/A
eggNOG-mapper	UHGV-0172186_56	1134413.ANNK01000120_gene2014	192.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-0172186_56	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0172186_56	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0172186_56	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0172186_56	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0172186_57	phrog_706	114.8	7.9e-34	N/A	unknown function
UniRef90	UHGV-0172186_57	UniRef90_UPI001D0AAED0	306.0	0	bacteriophage Gp15 family protein	N/A
eggNOG-mapper	UHGV-0172186_57	999413.HMPREF1094_00208	123.0	3.02e-33	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0172186_57	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0172186	Yes	38,074	43	96	1