vOTU vOTU-065389

vOTU: vOTU-065389

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-065389
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-14990 → vSUBGEN-25703 → vOTU-065389
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0211452
Biosample ID	N/A
Genome length (bp)	30,759 bps
CheckV completeness	90.15% (High-quality)
CDS count	48
CDS density	93.76%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	26	Host agreement	76.92
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0211452_1	phrog_9	85.9	4.7e-25	terminase large subunit	head and packaging
UniRef90	UHGV-0211452_1	UniRef90_A0A358Q0T6	212.0	0	Terminase large subunit (Fragment)	N/A
eggNOG-mapper	UHGV-0211452_1	349161.Dred_2607	309.0	0	Phage terminase-like protein large subunit	N/A
COG	UHGV-0211452_1	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0211452_1	PF20441,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_2	phrog_12	106.4	1.3e-31	portal protein	head and packaging
UniRef90	UHGV-0211452_2	UniRef90_G9YSB8	505.0	0	Phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0211452_2	610130.Closa_0742	296.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-0211452_2	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0211452_2	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0211452_2	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0211452_2	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_3	K01358	133.6	2e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0211452_3	phrog_94	243.7	0	head maturation protease	head and packaging
UniRef90	UHGV-0211452_3	UniRef90_A0A1Y4BT12	335.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-0211452_3	349161.Dred_2605	308.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0211452_3	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0211452_3	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0211452_3	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_4	phrog_10	148.8	5.32493e-44	major head protein	head and packaging
UniRef90	UHGV-0211452_4	UniRef90_G9YSC0	692.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0211452_4	1235792.C808_00086	430.0	0	Phage capsid family	N/A
Pfam	UHGV-0211452_4	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-0211452_4	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-0211452_4	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0211452_4	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0211452_4	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_5	phrog_749	72.0	6.9e-21	N/A	unknown function
eggNOG-mapper	UHGV-0211452_5	1415774.U728_1251	63.2	0.0000000000149	N/A	N/A
PHROG	UHGV-0211452_6	phrog_19734	123.8	8.4e-37	N/A	unknown function
UniRef90	UHGV-0211452_6	UniRef90_A0A6I7GNS7	130.0	1.77e-36	Phage head closure protein	N/A
eggNOG-mapper	UHGV-0211452_6	349161.Dred_2602	91.3	4.52e-22	N/A	N/A
structural_annotation	UHGV-0211452_6	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211452_7	1235798.C817_04588	89.4	1.51e-21	N/A	N/A
structural_annotation	UHGV-0211452_7	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_8	phrog_5	41.8	0.00000000002	tail completion or Neck1 protein	connector
UniRef90	UHGV-0211452_8	UniRef90_A0A1C6FG30	127.0	3.12e-34	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0211452_8	908340.HMPREF9406_2573	126.0	6.24e-35	N/A	N/A
structural_annotation	UHGV-0211452_8	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_9	phrog_88	91.9	6.7e-27	major tail protein	tail
UniRef90	UHGV-0211452_9	UniRef90_A0A1C6CIL7	125.0	1.93e-31	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0211452_9	33035.JPJF01000039_gene278	71.2	0.00000000000152	N/A	N/A
NCBIFam	UHGV-0211452_9	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-0211452_9	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_11	phrog_6900	251.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0211452_11	UniRef90_A0A373CK98	297.0	0	PblA (Fragment)	N/A
eggNOG-mapper	UHGV-0211452_11	573061.Clocel_3967	323.0	0	tape measure	N/A
COG	UHGV-0211452_11	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0211452_11	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_12	phrog_33	75.2	1.5e-21	distal tail protein Dit	tail
UniRef90	UHGV-0211452_12	UniRef90_A0A173Z1X4	195.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0211452_12	1123263.AUKY01000068_gene490	122.0	1.62e-31	tail component	N/A
COG	UHGV-0211452_12	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0211452_12	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_13	phrog_1067	270.2	0	minor head protein	head and packaging
UniRef90	UHGV-0211452_13	UniRef90_A0A1C6H6B4	418.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0211452_13	1123263.AUKY01000068_gene489	305.0	0	Phage minor structural protein	N/A
Pfam	UHGV-0211452_13	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0211452_13	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0211452_13	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0211452_13	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211452_14	PF10651,TIGR02059	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211452_15	1408437.JNJN01000040_gene189	114.0	3.89e-31	N/A	N/A
PHROG	UHGV-0211452_16	phrog_18593	98.6	6.5e-29	N/A	unknown function
UniRef90	UHGV-0211452_16	UniRef90_R6RWR8	144.0	5.12006e-41	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0211452_16	411460.RUMTOR_02099	120.0	1e-31	N/A	N/A
Pfam	UHGV-0211452_16	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-0211452_16	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_17	phrog_4105	98.2	4.5e-29	N/A	unknown function
UniRef90	UHGV-0211452_17	UniRef90_A0A8D9UHA9	153.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0211452_17	411460.RUMTOR_01326	129.0	8.04e-38	N/A	N/A
PHROG	UHGV-0211452_18	phrog_881	92.2	2.6e-27	holin	lysis
UniRef90	UHGV-0211452_18	UniRef90_A0A8D9PDR9	80.5	2.11e-18	Holin	N/A
eggNOG-mapper	UHGV-0211452_18	1229517.AMFD01000023_gene1299	73.9	1.21e-16	Putative phage holin Dp-1	N/A
Pfam	UHGV-0211452_18	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-0211452_18	PF16938,COG3237	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_19	K01448	80.2	2.8e-23	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0211452_19	phrog_435	100.9	1.5e-29	endolysin	lysis
UniRef90	UHGV-0211452_19	UniRef90_A0A810PUG7	169.0	0	SPOR domain-containing protein	N/A
eggNOG-mapper	UHGV-0211452_19	697281.Mahau_0053	122.0	1.5e-31	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0211452_19	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0211452_19	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0211452_19	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0211452_19	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_23	K14059	222.0	0	int; integrase	N/A
PHROG	UHGV-0211452_23	phrog_1	180.7	0	integrase	integration and excision
UniRef90	UHGV-0211452_23	UniRef90_U2QJL8	446.0	0	Site-specific recombinase, phage integrase family	N/A
eggNOG-mapper	UHGV-0211452_23	1226322.HMPREF1545_00144	446.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0211452_23	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0211452_23	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0211452_23	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211452_24	UniRef90_A0A8D9UHA6	120.0	4.85e-31	Helix-turn-helix XRE-family like protein	N/A
Pfam	UHGV-0211452_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0211452_24	PF12844,MF_00535,TIGR03070,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0211452_25	1232453.BAIF02000097_gene2773	58.2	0.000000141	EXOIII	N/A
COG	UHGV-0211452_25	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0211452_25	PF18899,NF007603,COG3586	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_26	K02342	162.7	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0211452_26	phrog_192	134.9	3.60001e-40	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211452_26	UniRef90_A0A6N3J5K0	144.0	1.64e-37	DNA-directed DNA polymerase	N/A
eggNOG-mapper	UHGV-0211452_26	626939.HMPREF9443_00491	134.0	2.04e-34	DNA polymerase III	N/A
PADLOC	UHGV-0211452_26	cd06127	120.3	2.2e-35	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0211452_26	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0211452_26	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
COG	UHGV-0211452_26	COG2176	N/A	N/A	DNA polymerase III, alpha subunit (gram-positive type)	N/A
structural_annotation	UHGV-0211452_26	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_27	K22300	45.4	0.0000000000017	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0211452_27	phrog_8	60.4	4.6e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0211452_27	UniRef90_A0A8F2F0Z3	81.6	1.06e-17	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0211452_27	411460.RUMTOR_02056	70.9	0.0000000000000644	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0211452_27	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211452_27	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0211452_27	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_30	K22300	51.8	0.000000000000016	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0211452_30	phrog_2967	42.7	0.0000000000095	transcriptional regulator	transcription regulation
UniRef90	UHGV-0211452_30	UniRef90_A0A416D4N5	60.1	0.00000000011	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0211452_30	553973.CLOHYLEM_04837	58.5	0.00000000132	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0211452_30	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0211452_30	COG1395	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-0211452_30	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211452_31	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211452_33	PF21327	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_34	phrog_270	83.6	3.2e-24	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211452_34	UniRef90_UPI00103046FE	140.0	1.41e-37	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0211452_34	742738.HMPREF9460_00851	145.0	1.16e-39	Helix-turn-helix domain	N/A
Pfam	UHGV-0211452_34	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0211452_34	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0211452_34	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_35	K02314	268.6	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0211452_35	phrog_19	243.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211452_35	UniRef90_A0A1Y3RP11	290.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0211452_35	1226322.HMPREF1545_00095	284.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0211452_35	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0211452_35	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0211452_35	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0211452_35	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_37	K03496	180.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0211452_37	phrog_164	143.7	1.19951e-42	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211452_37	UniRef90_UPI000318E277	295.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-0211452_37	1007096.BAGW01000033_gene1614	285.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-0211452_37	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0211452_37	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0211452_37	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-0211452_38	K03497	86.0	6.1e-25	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0211452_38	phrog_27290	365.8	0	N/A	unknown function
UniRef90	UHGV-0211452_38	UniRef90_UPI001C029D7C	343.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0211452_38	742738.HMPREF9460_00856	270.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0211452_38	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0211452_38	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0211452_38	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0211452_39	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
UniRef90	UHGV-0211452_43	UniRef90_UPI000E2BA351	57.8	0.000000237	N/A	N/A
Pfam	UHGV-0211452_43	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0211452_43	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_47	phrog_3584	64.5	1.7e-18	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0211452_47	742738.HMPREF9460_04063	234.0	0	N/A	N/A
structural_annotation	UHGV-0211452_47	PF01446	N/A	N/A	N/A	N/A
PHROG	UHGV-0211452_48	phrog_119	75.4	7.7e-22	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0211452_48	UniRef90_G9YSB5	149.0	1.96182e-44	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0211452_48	926561.KB900623_gene763	83.2	3.98e-19	HNH nucleases	N/A
Pfam	UHGV-0211452_48	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0211452_48	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0211452	Yes	30,759	60	90	1
UHGV-0181739	No	30,163	60	88	1