vOTU vOTU-065417

vOTU: vOTU-065417

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-065417
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00124 → vGENUS-00131 → vSUBGEN-43223 → vOTU-065417
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1521131
Biosample ID	N/A
Genome length (bp)	37,668 bps
CheckV completeness	92.17% (High-quality)
CDS count	56
CDS density	90.08%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	428	Host agreement	98.36
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 92.17)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1521131_1	394503.Ccel_2974	60.1	0.000000424	N/A	N/A
structural_annotation	UHGV-1521131_1	COG5342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1521131_4	PF21441,TIGR04176,COG1846	N/A	N/A	N/A	N/A
UniRef90	UHGV-1521131_5	UniRef90_A0A2A7AM72	159.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_5	1378168.N510_01712	80.9	4.72e-17	N/A	N/A
structural_annotation	UHGV-1521131_5	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1521131_6	PF21291,TIGR03070,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1521131_12	PF10346,MF_00337,NF010671	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_15	phrog_14970	45.0	0.000000000002	N/A	unknown function
COG	UHGV-1521131_15	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-1521131_15	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_16	phrog_72	41.6	0.000000000021	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1521131_16	411471.SUBVAR_05829	135.0	5.88e-38	N/A	N/A
structural_annotation	UHGV-1521131_16	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_18	phrog_7566	86.8	1.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-1521131_18	411471.SUBVAR_05830	105.0	3.19e-28	N/A	N/A
KOfam	UHGV-1521131_19	K03111	147.0	1.90577e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1521131_19	phrog_44	153.0	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1521131_19	UniRef90_D4K451	213.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1521131_19	748224.HMPREF9436_00638	214.0	0	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1521131_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1521131_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1521131_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1521131_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1521131_19	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_20	phrog_6969	58.5	8.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1521131_20	748224.HMPREF9436_00735	157.0	2.25609e-43	N/A	N/A
Pfam	UHGV-1521131_20	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
Pfam	UHGV-1521131_20	PF19481	N/A	N/A	N/A	DUF6017
COG	UHGV-1521131_20	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1521131_20	PF19481,PF01978,MF_01819,TIGR01610,COG5625	N/A	N/A	N/A	N/A
KOfam	UHGV-1521131_22	K03496	206.1	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1521131_22	phrog_164	155.4	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1521131_22	UniRef90_A0A2A7B6H3	358.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_22	411471.SUBVAR_05839	228.0	0	AAA domain	N/A
Pfam	UHGV-1521131_22	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1521131_22	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1521131_22	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1521131_23	K03497	87.2	3.2e-25	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1521131_23	phrog_4715	111.3	7e-33	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1521131_23	UniRef90_A0A2A7B6Q0	355.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_23	411471.SUBVAR_05842	183.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1521131_23	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1521131_23	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1521131_23	PF02195,MF_02015,TIGR03764,COG1475	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1521131_24	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_27	phrog_3136	128.5	1.8e-38	N/A	unknown function
UniRef90	UHGV-1521131_27	UniRef90_A0A329TS47	133.0	1.02e-35	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_27	693746.OBV_25380	67.8	0.0000000000347	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1521131_27	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1521131_27	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_28	phrog_119	56.4	4.3e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1521131_28	UniRef90_A0A2A7B6I3	232.0	0	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_28	610130.Closa_0739	107.0	1.8e-28	HNH nucleases	N/A
Pfam	UHGV-1521131_28	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1521131_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1521131_29	phrog_13845	56.2	3.9e-16	N/A	unknown function
eggNOG-mapper	UHGV-1521131_29	1399942.U3PDR2_9CAUD	70.9	0.0000000000000616	N/A	N/A
structural_annotation	UHGV-1521131_29	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_30	phrog_9	243.8	0	terminase large subunit	head and packaging
UniRef90	UHGV-1521131_30	UniRef90_A0A2A7ALT4	1056.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1521131_30	610130.Closa_0741	632.0	0	Phage Terminase	N/A
Pfam	UHGV-1521131_30	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1521131_30	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1521131_30	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_31	phrog_12	131.2	6.9e-39	portal protein	head and packaging
UniRef90	UHGV-1521131_31	UniRef90_A0A2A7B6S8	548.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1521131_31	349161.Dred_2606	259.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1521131_31	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1521131_31	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1521131_31	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1521131_31	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1521131_32	K01358	75.3	1.1e-21	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1521131_32	phrog_94	128.8	6.1e-38	head maturation protease	head and packaging
UniRef90	UHGV-1521131_32	UniRef90_UPI00111E41DA	136.0	5.14e-36	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-1521131_32	1232452.BAIB02000007_gene1626	128.0	1.49e-33	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1521131_32	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1521131_32	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1521131_32	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_33	phrog_10	129.7	1.9e-38	major head protein	head and packaging
UniRef90	UHGV-1521131_33	UniRef90_A0A2A7B712	726.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-1521131_33	1235792.C808_00086	441.0	0	Phage capsid family	N/A
Pfam	UHGV-1521131_33	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1521131_33	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1521131_33	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1521131_33	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1521131_33	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_34	phrog_749	56.6	4.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-1521131_34	1211817.CCAT010000053_gene2133	61.6	0.0000000000697	N/A	N/A
PHROG	UHGV-1521131_35	phrog_19734	94.8	7.9e-28	N/A	unknown function
UniRef90	UHGV-1521131_35	UniRef90_A0A0D8I708	80.5	6.66e-17	Phage head-tail joining protein	N/A
eggNOG-mapper	UHGV-1521131_35	349161.Dred_2602	74.7	0.00000000000000194	N/A	N/A
structural_annotation	UHGV-1521131_35	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1521131_36	999413.HMPREF1094_02005	68.6	0.000000000000142	N/A	N/A
structural_annotation	UHGV-1521131_36	PF05657,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_37	phrog_5	45.9	0.00000000000051	tail completion or Neck1 protein	connector
UniRef90	UHGV-1521131_37	UniRef90_A0A1C6FG30	115.0	1.37e-29	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-1521131_37	908340.HMPREF9406_2573	110.0	2.49e-28	N/A	N/A
structural_annotation	UHGV-1521131_37	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_38	phrog_88	93.2	2.8e-27	major tail protein	tail
UniRef90	UHGV-1521131_38	UniRef90_G9YSC5	107.0	8.91e-26	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1521131_38	33035.JPJF01000039_gene278	73.6	0.000000000000201	N/A	N/A
NCBIFam	UHGV-1521131_38	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-1521131_38	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_40	phrog_9959	85.4	2.2e-25	tail length tape measure protein	tail
UniRef90	UHGV-1521131_40	UniRef90_A0A2A7ALS3	904.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_40	596328.HMPREF0578_1241	160.0	1.66e-37	phage tail tape measure protein	N/A
Pfam	UHGV-1521131_40	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1521131_40	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1521131_40	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1521131_40	PF20155,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_41	phrog_33	79.3	8.4e-23	distal tail protein Dit	tail
UniRef90	UHGV-1521131_41	UniRef90_A0A173Z1X4	141.0	7.7e-38	Phage-related protein	N/A
eggNOG-mapper	UHGV-1521131_41	908340.HMPREF9406_2569	94.4	1.26e-20	phage tail	N/A
NCBIFam	UHGV-1521131_41	TIGR01633.1	N/A	N/A	distal tail protein Dit	N/A
COG	UHGV-1521131_41	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1521131_41	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_42	phrog_1067	173.0	0	minor head protein	head and packaging
UniRef90	UHGV-1521131_42	UniRef90_A0A2A7AM44	713.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_42	1123263.AUKY01000068_gene489	192.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1521131_42	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1521131_42	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1521131_42	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1521131_42	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
KOfam	UHGV-1521131_44	K03651	41.5	0.000000000015	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
Pfam	UHGV-1521131_44	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-1521131_44	COG1409	N/A	N/A	3',5'-cyclic AMP phosphodiesterase CpdA	N/A
structural_annotation	UHGV-1521131_44	PF10651,PF12850,MF_00905,NF008359,NF038186,COG1409	N/A	N/A	N/A	N/A
KOfam	UHGV-1521131_45	K07273	163.9	0	acm; lysozyme	N/A
PHROG	UHGV-1521131_45	phrog_291	132.1	5.2e-39	endolysin	lysis
UniRef90	UHGV-1521131_45	UniRef90_UPI001D0EE7D8	308.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1521131_45	748224.HMPREF9436_00154	283.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1521131_45	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1521131_45	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1521131_45	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_47	phrog_15303	84.4	9.8e-25	N/A	unknown function
structural_annotation	UHGV-1521131_49	PF07374,MF_00245,NF001072,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1521131_50	K22300	62.6	4.1e-22	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1521131_50	phrog_8	59.6	2.1e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-1521131_50	UniRef90_A0A386H238	62.0	0.00000000667	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1521131_50	1235790.C805_00648	59.3	0.0000000182	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-1521131_50	retron_type_VI_hth_cluster2_1	46.0	0.00000000000008	N/A	Retron
Pfam	UHGV-1521131_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1521131_50	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-1521131_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1521131_50	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1521131_54	phrog_16490	104.8	6.2e-40	N/A	unknown function
eggNOG-mapper	UHGV-1521131_54	1408437.JNJN01000043_gene803	161.0	1.4013e-45	N/A	N/A
eggNOG-mapper	UHGV-1521131_55	658655.HMPREF0988_00916	120.0	3.02e-33	N/A	N/A
eggNOG-mapper	UHGV-1521131_56	1408437.JNJN01000043_gene801	94.4	3.43e-21	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1521131	Yes	37,668	53	92	1
UHGV-0203941	No	18,698	53	46	1