vOTU vOTU-065551

vOTU: vOTU-065551

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-065551
Number of genomes	8
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-02427 → vSUBGEN-15072 → vOTU-065551
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1333045
Biosample ID	N/A
Genome length (bp)	38,993 bps
CheckV completeness	93.37% (High-quality)
CDS count	67
CDS density	91.59%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	343	Host agreement	95.92
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.37)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1333045_1	phrog_1863	75.7	3.4e-22	N/A	unknown function
eggNOG-mapper	UHGV-1333045_1	748224.HMPREF9436_00408	108.0	4.51e-30	N/A	N/A
KOfam	UHGV-1333045_2	K07273	166.9	0	acm; lysozyme	N/A
PHROG	UHGV-1333045_2	phrog_291	132.8	3.1e-39	endolysin	lysis
UniRef90	UHGV-1333045_2	UniRef90_UPI001D0EE7D8	305.0	0	glycoside hydrolase family 25 protein	N/A
eggNOG-mapper	UHGV-1333045_2	748224.HMPREF9436_00154	282.0	0	hydrolase, family 25	N/A
Pfam	UHGV-1333045_2	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1333045_2	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1333045_2	PF01183,COG3757	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1333045_3	1235799.C818_03019	65.1	0.0000000453	cellulase activity	N/A
COG	UHGV-1333045_3	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1333045_3	PF05096,MF_03141,NF035926,COG3823	N/A	N/A	N/A	N/A
UniRef90	UHGV-1333045_4	UniRef90_A0A1M6MWV9	68.9	0.0000000000774	Phage tail protein	N/A
eggNOG-mapper	UHGV-1333045_4	1111121.HMPREF1247_1241	71.6	0.00000000000121	N/A	N/A
structural_annotation	UHGV-1333045_4	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_6	phrog_3558	277.9	0	tail protein	tail
UniRef90	UHGV-1333045_6	UniRef90_A0A844DGT5	770.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-1333045_6	411465.PEPMIC_00746	144.0	6.15e-34	Prophage endopeptidase tail	N/A
Pfam	UHGV-1333045_6	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-1333045_6	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1333045_6	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_7	phrog_28775	89.3	3.2e-26	tail length tape measure protein	tail
UniRef90	UHGV-1333045_7	UniRef90_A0A844DDD5	566.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1333045_7	1492737.FEM08_12070	145.0	1.84e-33	tape measure	N/A
Pfam	UHGV-1333045_7	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1333045_7	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1333045_7	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1333045_7	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_10	phrog_885	65.5	6.3e-19	major tail protein	tail
UniRef90	UHGV-1333045_10	UniRef90_A0A843J9F0	124.0	1.65e-31	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1333045_10	642492.Clole_1864	53.9	0.00000253	N/A	N/A
structural_annotation	UHGV-1333045_10	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_11	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_12	phrog_17977	44.9	0.0000000000015	N/A	unknown function
UniRef90	UHGV-1333045_12	UniRef90_A0A844DHJ8	231.0	0	Phage head closure protein	N/A
structural_annotation	UHGV-1333045_12	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_14	phrog_544	143.8	1.10002e-42	major head protein	head and packaging
UniRef90	UHGV-1333045_14	UniRef90_R0BKA1	434.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1333045_14	476272.RUMHYD_01776	323.0	0	N/A	N/A
structural_annotation	UHGV-1333045_14	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_17	phrog_5	50.4	0.000000000000056	tail completion or Neck1 protein	connector
UniRef90	UHGV-1333045_17	UniRef90_A0A844DDB3	287.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1333045_17	1123309.AQYB01000018_gene814	87.4	5.04e-20	Bacteriophage HK97-gp10, putative tail-component	N/A
structural_annotation	UHGV-1333045_17	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_19	phrog_2468	80.0	1.1e-23	head morphogenesis	head and packaging
UniRef90	UHGV-1333045_19	UniRef90_A0A844DBI4	595.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1333045_19	1504822.CCNO01000013_gene286	126.0	2.85e-29	cell adhesion	N/A
Pfam	UHGV-1333045_19	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-1333045_19	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_19	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_20	phrog_64	122.0	1.6e-36	portal protein	head and packaging
UniRef90	UHGV-1333045_20	UniRef90_A0A6N7TNT3	489.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1333045_20	673376.F2VHW1_9CAUD	166.0	1.48538e-43	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1333045_20	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1333045_20	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1333045_21	K06909	367.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1333045_21	phrog_3717	157.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-1333045_21	UniRef90_A0A416S378	485.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1333045_21	665956.HMPREF1032_02957	445.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1333045_21	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1333045_21	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1333045_21	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1333045_21	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1333045_21	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_24	PF17941,MF_01917,NF010490,COG3886	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_26	PF07374,MF_00245,TIGR01636,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1333045_28	K01160	67.2	4.2e-19	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1333045_28	phrog_34	65.9	6.9e-19	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333045_28	UniRef90_A0A844DBG8	227.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-1333045_28	561177.ANHYDRO_01396	128.0	1.18e-36	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-1333045_28	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1333045_28	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1333045_28	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_29	phrog_3136	118.4	2.6e-35	N/A	unknown function
UniRef90	UHGV-1333045_29	UniRef90_A0A6N7TMC2	218.0	0	ASCH domain-containing protein	N/A
COG	UHGV-1333045_29	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1333045_29	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_30	phrog_757	226.7	0	DNA methyltransferase	other
UniRef90	UHGV-1333045_30	UniRef90_UPI001A9B5584	223.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1333045_30	748224.HMPREF9436_03069	223.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-1333045_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1333045_30	PF00145,MF_01872,TIGR00675,COG0270	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_32	PF01775,MF_00273,NF001981,COG2157	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_33	phrog_15768	110.5	7.7e-33	N/A	unknown function
UniRef90	UHGV-1333045_33	UniRef90_A0A2J4JRQ7	253.0	0	N/A	N/A
eggNOG-mapper	UHGV-1333045_33	748224.HMPREF9436_03357	124.0	6.65e-32	N/A	N/A
Pfam	UHGV-1333045_33	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1333045_33	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_34	phrog_4572	118.3	3.2e-35	N/A	unknown function
eggNOG-mapper	UHGV-1333045_34	97139.C824_00731	106.0	2.78e-27	N/A	N/A
KOfam	UHGV-1333045_35	K03111	140.8	1.40004e-41	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1333045_35	phrog_44	148.8	2.24208e-44	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333045_35	UniRef90_UPI001C00AA91	225.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1333045_35	718252.FP2_06770	209.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1333045_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1333045_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1333045_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1333045_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1333045_35	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_36	phrog_561	103.3	2.3e-30	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333045_36	UniRef90_UPI0011C8A287	144.0	1.35e-39	recombinase RecT	N/A
eggNOG-mapper	UHGV-1333045_36	742733.HMPREF9469_01849	139.0	3.69e-38	N/A	N/A
structural_annotation	UHGV-1333045_36	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_38	PF14120	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_40	PF10743,NF033787	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_42	phrog_373	195.6	0	anti-repressor	transcription regulation
UniRef90	UHGV-1333045_42	UniRef90_UPI001C039A6C	390.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-1333045_42	1027292.HMPREF9372_3403	164.0	0	Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1333045_42	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
Pfam	UHGV-1333045_42	PF10552	N/A	N/A	ORF6C domain	ORF6C
NCBIFam	UHGV-1333045_42	TIGR02681.1	N/A	N/A	phage regulatory protein, Rha family	N/A
COG	UHGV-1333045_42	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1333045_42	PF03374,PF09669,TIGR02681,COG3645,COG3561	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_43	phrog_8	47.4	0.0000000000004	transcriptional regulator	transcription regulation
UniRef90	UHGV-1333045_43	UniRef90_UPI001C009F10	129.0	9.22e-38	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1333045_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1333045_43	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1333045_43	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1333045_44	PF01381,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_47	phrog_888	114.5	1e-34	N/A	unknown function
UniRef90	UHGV-1333045_47	UniRef90_A0A6N7TMA2	351.0	0	SHOCT domain-containing protein	N/A
eggNOG-mapper	UHGV-1333045_47	999411.HMPREF1092_03312	80.9	0.00000000000000173	Short C-terminal domain	N/A
Pfam	UHGV-1333045_47	PF14471	N/A	N/A	N/A	DUF4428
Pfam	UHGV-1333045_47	PF09851	N/A	N/A	Short C-terminal domain	SHOCT
structural_annotation	UHGV-1333045_47	PF15947,PF14471	N/A	N/A	N/A	N/A
KOfam	UHGV-1333045_50	K15773	43.7	0.0000000000052	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
PHROG	UHGV-1333045_50	phrog_2328	41.4	0.000000000013	transcriptional repressor	transcription regulation
UniRef90	UHGV-1333045_50	UniRef90_A0A6N7TLT0	207.0	0	Helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-1333045_50	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1333045_50	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1333045_50	PF13560,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-1333045_51	K14059	157.9	0	int; integrase	N/A
PHROG	UHGV-1333045_51	phrog_1	190.1	0	integrase	integration and excision
UniRef90	UHGV-1333045_51	UniRef90_A0A174D176	578.0	0	Tyrosine recombinase XerD	N/A
eggNOG-mapper	UHGV-1333045_51	411471.SUBVAR_05137	273.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1333045_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1333045_51	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-1333045_51	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1333045_53	476272.RUMHYD_01772	55.5	0.000000132	N/A	N/A
structural_annotation	UHGV-1333045_53	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_54	phrog_20016	208.1	0	N/A	unknown function
UniRef90	UHGV-1333045_54	UniRef90_A0A285PT46	201.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1333045_54	1226322.HMPREF1545_00077	182.0	0	N/A	N/A
structural_annotation	UHGV-1333045_54	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_56	phrog_16490	199.5	0	N/A	unknown function
eggNOG-mapper	UHGV-1333045_56	397290.C810_01328	113.0	1.29e-26	N/A	N/A
PHROG	UHGV-1333045_57	phrog_22984	70.6	2.1e-20	N/A	unknown function
PHROG	UHGV-1333045_58	phrog_21718	86.8	2.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-1333045_58	397290.C810_05210	78.2	4.33e-16	N/A	N/A
PHROG	UHGV-1333045_59	phrog_3754	96.5	2.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1333045_59	1485543.JMME01000025_gene2462	104.0	9.78e-28	N/A	N/A
UniRef90	UHGV-1333045_62	UniRef90_A0A415ZLW7	64.3	0.0000000000534	DNA-binding response regulator	N/A
eggNOG-mapper	UHGV-1333045_62	411469.EUBHAL_02513	63.2	0.00000000022	N/A	N/A
Pfam	UHGV-1333045_62	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
structural_annotation	UHGV-1333045_62	PF00196,NF040595,COG2771	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_63	phrog_13890	58.7	7.5e-17	N/A	unknown function
UniRef90	UHGV-1333045_63	UniRef90_A0A1C7FKE8	59.3	0.000000000223	Arc domain-containing protein	N/A
eggNOG-mapper	UHGV-1333045_63	657322.FPR_28500	46.2	0.00000889	N/A	N/A
structural_annotation	UHGV-1333045_63	NF010256	N/A	N/A	N/A	N/A
PHROG	UHGV-1333045_64	phrog_99	42.8	0.0000000000079	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1333045_64	UniRef90_A0A0K9N8D8	86.7	7.37e-18	Putative AP2 domain protein	N/A
eggNOG-mapper	UHGV-1333045_64	742740.HMPREF9474_00071	77.0	0.00000000000000531	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1333045	Yes	38,993	54	93	1
UHGV-0141965	No	37,327	54	89	1
UHGV-1516169	No	37,327	54	89	1
UHGV-1427087	No	34,061	54	81	1
UHGV-0196056	No	34,058	54	81	1
UHGV-0073304	No	28,837	54	69	1
UHGV-1438822	No	28,837	54	69	1
UHGV-2019659	No	10,288	55	25	1