vOTU vOTU-065637

vOTU: vOTU-065637

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-065637
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00121 → vSUBGEN-29222 → vOTU-065637
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0042947
Biosample ID	SAMEA728661
Genome length (bp)	38,787 bps
CheckV completeness	99.90% (High-quality)
CDS count	63
CDS density	91.28%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	350	Host agreement	92
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0042947_2	PF10651	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_4	phrog_10898	286.7	0	N/A	unknown function
UniRef90	UHGV-0042947_4	UniRef90_A0A7U3NJT3	187.0	0	Putative Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0042947_4	717606.PaecuDRAFT_2136	67.8	0.00000000028	S-layer homology domain	N/A
COG	UHGV-0042947_4	COG1520	N/A	N/A	Outer membrane protein assembly factor BamB, contains PQQ-like beta-propeller repeat	N/A
structural_annotation	UHGV-0042947_4	PF19081,PF15418,MF_01905,NF032891,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0042947_5	PF16408,NF033510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0042947_6	1519439.JPJG01000060_gene1892	54.7	0.000000257	Collagen triple helix repeat (20 copies)	N/A
COG	UHGV-0042947_6	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
PHROG	UHGV-0042947_7	phrog_10993	62.0	8e-18	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0042947_7	UniRef90_UPI000834AF98	102.0	7.56e-22	N/A	N/A
eggNOG-mapper	UHGV-0042947_7	742738.HMPREF9460_02534	62.4	0.0000000281	N/A	N/A
Pfam	UHGV-0042947_7	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0042947_7	PF19789	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0042947_9	1519439.JPJG01000060_gene1895	75.9	0.000000000000399	N/A	N/A
structural_annotation	UHGV-0042947_9	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_12	phrog_6918	94.6	6.9e-28	holin	lysis
UniRef90	UHGV-0042947_12	UniRef90_A0A316QCY7	102.0	2.45e-26	Holin	N/A
eggNOG-mapper	UHGV-0042947_12	1297617.JPJD01000020_gene301	101.0	1.71e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-0042947_12	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0042947_12	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0042947_13	UniRef90_UPI00164EA432	224.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0042947_13	525254.HMPREF0072_1273	220.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-0042947_13	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-0042947_13	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_15	phrog_16490	53.9	0.0000000000000041	N/A	unknown function
structural_annotation	UHGV-0042947_16	PF18573,NF033147	N/A	N/A	N/A	N/A
UniRef90	UHGV-0042947_17	UniRef90_A0A8F0WD75	75.1	0.0000000000000804	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-0042947_17	1378168.N510_03079	67.8	0.0000000000195	N/A	N/A
KOfam	UHGV-0042947_18	K06400	247.1	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0042947_18	phrog_95	263.3	0	integrase	integration and excision
UniRef90	UHGV-0042947_18	UniRef90_G9YSD9	418.0	0	Resolvase protein	N/A
eggNOG-mapper	UHGV-0042947_18	1408437.JNJN01000002_gene1420	408.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0042947_18	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0042947_18	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0042947_18	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0042947_18	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0042947_18	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-0042947_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0042947_19	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0042947_19	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_20	phrog_10292	78.1	5.1e-23	N/A	unknown function
UniRef90	UHGV-0042947_20	UniRef90_A0A416W984	105.0	2.15e-26	TM2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0042947_20	1519439.JPJG01000059_gene1953	82.4	1.14e-17	TM2 domain	N/A
Pfam	UHGV-0042947_20	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
Pfam	UHGV-0042947_20	PF05154	N/A	N/A	TM2 domain	TM2
COG	UHGV-0042947_20	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-0042947_21	K02342	189.8	0	dnaQ; DNA polymerase III subunit epsilon [EC:2.7.7.7]	N/A
PHROG	UHGV-0042947_21	phrog_192	167.0	0	DNA polymerase exonuclease subunit	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0042947_21	UniRef90_UPI001897CA3A	333.0	0	exonuclease	N/A
eggNOG-mapper	UHGV-0042947_21	1437608.BBIA_1844	278.0	0	Exonuclease, DNA polymerase III, epsilon subunit family	N/A
PADLOC	UHGV-0042947_21	cd06127	144.6	8.09951e-43	CAS-I,CAS-II,CAS-III,CAS-IV,CAS-V,CAS-VI; associated	CRISPR-CAS
Pfam	UHGV-0042947_21	PF00929	N/A	N/A	Exonuclease	RNase_T
Pfam	UHGV-0042947_21	PF00533	N/A	N/A	BRCA1 C Terminus (BRCT) domain	BRCT
NCBIFam	UHGV-0042947_21	TIGR00573.1	N/A	N/A	exonuclease, DNA polymerase III, epsilon subunit family	N/A
COG	UHGV-0042947_21	COG0272	N/A	N/A	NAD-dependent DNA ligase	N/A
structural_annotation	UHGV-0042947_21	PF00929,PF00533,MF_00157,NF005289,COG0847	N/A	N/A	N/A	N/A
KOfam	UHGV-0042947_23	K22300	51.8	0.00000000000002	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0042947_23	phrog_2967	52.6	0.0000000000000038	transcriptional regulator	transcription regulation
UniRef90	UHGV-0042947_23	UniRef90_A0A1Y4L0A2	126.0	3.76e-35	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0042947_23	1235797.C816_03553	99.0	2.17e-24	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0042947_23	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0042947_23	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0042947_23	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0042947_26	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0042947_29	NF041247	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_32	phrog_36399	50.4	0.000000000000045	N/A	unknown function
PHROG	UHGV-0042947_33	phrog_8470	271.1	0	N/A	unknown function
UniRef90	UHGV-0042947_33	UniRef90_UPI0002D9F0BD	308.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0042947_33	1007096.BAGW01000031_gene117	308.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0042947_33	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0042947_33	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_34	phrog_15609	229.6	0	N/A	unknown function
UniRef90	UHGV-0042947_34	UniRef90_UPI001246A313	86.3	0.00000000000000208	N/A	N/A
eggNOG-mapper	UHGV-0042947_34	1501230.ET33_21155	123.0	9.67e-30	N/A	N/A
Pfam	UHGV-0042947_34	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0042947_34	COG0188	N/A	N/A	DNA gyrase/topoisomerase IV, subunit A	N/A
structural_annotation	UHGV-0042947_34	PF11300,PF07321,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_35	phrog_3136	133.6	6.8e-40	N/A	unknown function
UniRef90	UHGV-0042947_35	UniRef90_A0A3D0HBD2	114.0	2.26e-29	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0042947_35	642492.Clole_1416	70.9	0.0000000000000884	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-0042947_35	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-0042947_35	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0042947_35	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_36	phrog_355	78.0	1.2e-22	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0042947_36	UniRef90_A0A413FXK8	118.0	9.99e-33	N/A	N/A
eggNOG-mapper	UHGV-0042947_36	573061.Clocel_3558	89.7	4.36e-22	N/A	N/A
Pfam	UHGV-0042947_36	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0042947_36	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0042947_36	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_37	phrog_38832	47.2	1.1e-17	N/A	unknown function
eggNOG-mapper	UHGV-0042947_37	665956.HMPREF1032_03087	100.0	3.73e-25	N/A	N/A
PHROG	UHGV-0042947_40	phrog_190	99.8	2.9e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0042947_40	UniRef90_UPI0006C2AC63	126.0	2.31e-34	N/A	N/A
eggNOG-mapper	UHGV-0042947_40	1226322.HMPREF1545_00295	114.0	4.02e-30	N/A	N/A
Pfam	UHGV-0042947_40	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0042947_40	PF06356	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_45	phrog_3584	111.4	7.7e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0042947_45	537013.CLOSTMETH_02141	70.1	0.00000000000651	N/A	N/A
structural_annotation	UHGV-0042947_45	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0042947_46	1297617.JPJD01000059_gene2640	83.6	1.02e-18	N/A	N/A
structural_annotation	UHGV-0042947_46	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_47	phrog_119	48.7	0.0000000000001	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0042947_47	UniRef90_A0A174XSZ8	125.0	4.14e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-0042947_47	1235793.C809_01915	121.0	8.62e-34	HNH endonuclease	N/A
COG	UHGV-0042947_47	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-0042947_48	phrog_1066	130.6	5.8e-39	N/A	unknown function
eggNOG-mapper	UHGV-0042947_48	1382358.JHVN01000024_gene1703	124.0	3.37e-35	N/A	N/A
structural_annotation	UHGV-0042947_48	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_49	phrog_9	375.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0042947_49	UniRef90_A0A1Y3W5R1	787.0	0	Terminase	N/A
eggNOG-mapper	UHGV-0042947_49	1203606.HMPREF1526_00981	735.0	0	Terminase	N/A
Pfam	UHGV-0042947_49	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0042947_49	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0042947_49	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0042947_49	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_50	phrog_12	179.7	0	portal protein	head and packaging
UniRef90	UHGV-0042947_50	UniRef90_C4GAS6	503.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-0042947_50	626523.GCWU000342_01027	503.0	0	Portal protein	N/A
Pfam	UHGV-0042947_50	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0042947_50	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0042947_50	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0042947_51	K01358	132.6	4.7e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-0042947_51	phrog_94	203.9	0	head maturation protease	head and packaging
UniRef90	UHGV-0042947_51	UniRef90_UPI0018979DC8	209.0	0	Clp protease ClpP	N/A
eggNOG-mapper	UHGV-0042947_51	1280689.AUJC01000011_gene1520	194.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-0042947_51	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-0042947_51	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-0042947_51	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_52	phrog_10	183.4	0	major head protein	head and packaging
UniRef90	UHGV-0042947_52	UniRef90_A0A355RXP5	400.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0042947_52	1280689.AUJC01000011_gene1521	389.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-0042947_52	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0042947_52	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0042947_52	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0042947_52	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_53	phrog_5223	43.8	0.0000000000036	neck protein	connector
UniRef90	UHGV-0042947_53	UniRef90_E6MGY0	58.5	0.00000000355	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-0042947_53	887929.HMP0721_1264	58.5	0.000000000596	N/A	N/A
PHROG	UHGV-0042947_54	phrog_1951	74.8	8.6e-22	head-tail adaptor	connector
UniRef90	UHGV-0042947_54	UniRef90_A0A1F8UNT5	65.1	0.0000000000123	Phage head-tail adapter protein	N/A
eggNOG-mapper	UHGV-0042947_54	1094508.Tsac_2422	52.4	0.000000225	Phage head-tail joining protein	N/A
Pfam	UHGV-0042947_54	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0042947_54	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-0042947_54	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0042947_54	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0042947_55	1487921.DP68_11350	59.3	0.000000000557	N/A	N/A
structural_annotation	UHGV-0042947_55	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_56	phrog_5	43.4	0.0000000000076	tail completion or Neck1 protein	connector
structural_annotation	UHGV-0042947_56	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_57	phrog_88	84.5	1.4e-24	major tail protein	tail
UniRef90	UHGV-0042947_57	UniRef90_S0FUN2	114.0	9.42e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-0042947_57	1195236.CTER_5106	114.0	1.58e-29	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-0042947_57	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-0042947_57	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0042947_57	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0042947_58	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_59	phrog_8462	123.7	2.3e-36	tail length tape measure protein	tail
UniRef90	UHGV-0042947_59	UniRef90_UPI00098F054B	216.0	0	phage tail protein	N/A
eggNOG-mapper	UHGV-0042947_59	1195236.CTER_5104	201.0	0	nuclear chromosome segregation	N/A
COG	UHGV-0042947_59	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0042947_59	TIGR01760,NF033928	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_60	phrog_37549	80.9	1.8e-27	virion structural protein	head and packaging
UniRef90	UHGV-0042947_60	UniRef90_A0A3D0W045	234.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-0042947_60	1195236.CTER_5103	127.0	5.68e-28	N/A	N/A
structural_annotation	UHGV-0042947_60	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0042947_61	phrog_26795	135.9	9.60002e-41	N/A	unknown function
eggNOG-mapper	UHGV-0042947_61	1195236.CTER_5102	149.0	4.22e-39	N/A	N/A
structural_annotation	UHGV-0042947_61	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0042947_62	PF18614,MF_00085,NF003076,COG0231	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0042947	Yes	38,787	59	100	1