vOTU vOTU-066353

vOTU: vOTU-066353

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-066353
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-02321 → vGENUS-12731 → vSUBGEN-19669 → vOTU-066353
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0016773
Biosample ID	SAMEA4765940
Genome length (bp)	49,007 bps
CheckV completeness	99.90% (High-quality)
CDS count	61
CDS density	94.11%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	25	Host agreement	88
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0016773_1	phrog_22978	160.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0016773_1	693746.OBV_01590	207.0	0	N/A	N/A
eggNOG-mapper	UHGV-0016773_2	1226322.HMPREF1545_00786	125.0	1.44e-28	N/A	N/A
PHROG	UHGV-0016773_4	phrog_511	212.6	0	internal virion protein	head and packaging
UniRef90	UHGV-0016773_4	UniRef90_A0A8D9UH72	625.0	0	Stabilization protein (Fragment)	N/A
eggNOG-mapper	UHGV-0016773_4	1226322.HMPREF1545_00785	311.0	0	N/A	N/A
structural_annotation	UHGV-0016773_4	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_5	phrog_12105	108.8	3.4e-32	N/A	unknown function
eggNOG-mapper	UHGV-0016773_5	1519439.JPJG01000060_gene1891	77.0	1.56e-16	N/A	N/A
KOfam	UHGV-0016773_6	K01448	130.3	1.9e-38	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0016773_6	phrog_435	134.7	7e-40	endolysin	lysis
UniRef90	UHGV-0016773_6	UniRef90_A0A329MTH0	79.3	0.00000000000144	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0016773_6	1305836.AXVE01000003_gene2376	104.0	3.56e-22	Ami_3	N/A
Pfam	UHGV-0016773_6	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0016773_6	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
Pfam	UHGV-0016773_6	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0016773_6	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0016773_6	PF01520,PF09992,PF01471,MF_00562,TIGR02883,COG0860,COG4632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_7	phrog_355	57.1	2.6e-16	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016773_7	UniRef90_A0A417J5P5	196.0	0	N/A	N/A
eggNOG-mapper	UHGV-0016773_7	97138.C820_00250	125.0	3.23e-36	N/A	N/A
Pfam	UHGV-0016773_7	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-0016773_7	PF14359,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_8	phrog_1129	73.9	1.4e-21	holin	lysis
UniRef90	UHGV-0016773_8	UniRef90_UPI001EDED0D7	124.0	3.25e-35	phage holin family protein	N/A
eggNOG-mapper	UHGV-0016773_8	693746.OBV_13280	121.0	6.95e-35	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0016773_8	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0016773_8	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_10	phrog_1863	66.4	2.6e-19	N/A	unknown function
eggNOG-mapper	UHGV-0016773_10	748224.HMPREF9436_00408	95.5	5.03e-25	N/A	N/A
UniRef90	UHGV-0016773_11	UniRef90_A0A417GRR7	57.0	0.000000000534	XkdX family protein	N/A
structural_annotation	UHGV-0016773_11	PF09693,TIGR01669	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0016773_12	657322.FPR_21910	56.2	0.0000000326	N/A	N/A
PHROG	UHGV-0016773_13	phrog_10993	216.5	0	Hoc-like head decoration	head and packaging
eggNOG-mapper	UHGV-0016773_13	1121334.KB911071_gene1970	164.0	5.15678e-43	N/A	N/A
Pfam	UHGV-0016773_13	PF19789	N/A	N/A	N/A	DUF6273
PHROG	UHGV-0016773_14	phrog_15239	77.2	1.7e-22	N/A	unknown function
PHROG	UHGV-0016773_15	phrog_1357	249.1	0	major head protein	head and packaging
UniRef90	UHGV-0016773_15	UniRef90_A0A8D9UH64	427.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0016773_15	1449126.JQKL01000003_gene1695	388.0	0	N/A	N/A
Pfam	UHGV-0016773_15	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0016773_15	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0016773_15	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_16	phrog_13908	310.2	0	N/A	unknown function
UniRef90	UHGV-0016773_16	UniRef90_A0A174CZ20	104.0	1.6e-21	Predicted ribosomal protein	N/A
eggNOG-mapper	UHGV-0016773_16	1410650.JHWL01000003_gene2831	123.0	5.75e-30	N/A	N/A
KOfam	UHGV-0016773_17	K07584	59.7	2.9e-17	N/A	N/A
PHROG	UHGV-0016773_17	phrog_4478	68.2	9.2e-20	peptidase	other
UniRef90	UHGV-0016773_17	UniRef90_A0A4Q4IL80	61.2	0.000000000638	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0016773_17	401526.TcarDRAFT_1645	64.7	0.00000000000359	Cysteine protease Prp	N/A
Pfam	UHGV-0016773_17	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0016773_17	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016773_17	PF04327,NF011132,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_18	phrog_156	324.4	0	portal protein	head and packaging
UniRef90	UHGV-0016773_18	UniRef90_A0A8D9UH10	637.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0016773_18	748224.HMPREF9436_02547	551.0	0	N/A	N/A
structural_annotation	UHGV-0016773_18	PF16510,MF_04120,TIGR01538,COG4383	N/A	N/A	N/A	N/A
KOfam	UHGV-0016773_19	K06909	123.6	1.9e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0016773_19	phrog_979	196.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0016773_19	UniRef90_A0A8D9PDR5	781.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0016773_19	748224.HMPREF9436_01395	631.0	0	Terminase-like family	N/A
Pfam	UHGV-0016773_19	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0016773_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0016773_19	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016773_20	UniRef90_A0A8D9PDT2	173.0	0	Brinker DNA-binding domain protein	N/A
eggNOG-mapper	UHGV-0016773_20	1226322.HMPREF1545_00042	131.0	1.35e-37	N/A	N/A
structural_annotation	UHGV-0016773_20	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_23	phrog_1689	69.1	9.6e-20	nucleotide kinase	other
UniRef90	UHGV-0016773_23	UniRef90_UPI001897331D	109.0	1.56e-29	N/A	N/A
eggNOG-mapper	UHGV-0016773_23	641149.HMPREF9016_01178	54.3	0.0000000326	N/A	N/A
Pfam	UHGV-0016773_23	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0016773_23	PF11753	N/A	N/A	N/A	N/A
KOfam	UHGV-0016773_28	K00571	177.2	0	E2.1.1.72; site-specific DNA-methyltransferase (adenine-specific) [EC:2.1.1.72]	N/A
PHROG	UHGV-0016773_28	phrog_67	220.5	0	DNA methyltransferase	other
UniRef90	UHGV-0016773_28	UniRef90_A0A810QEK7	510.0	0	Methyltransferase	N/A
eggNOG-mapper	UHGV-0016773_28	1166018.FAES_1810	359.0	0	Belongs to the N(4) N(6)-methyltransferase family	N/A
PADLOC	UHGV-0016773_28	MTase_II_00173	356.2	0	Type II methyltransferase	RM
Pfam	UHGV-0016773_28	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0016773_28	COG0863	N/A	N/A	DNA modification methylase	N/A
structural_annotation	UHGV-0016773_28	PF01555,NF008572,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_30	phrog_757	47.7	0.00000000000022	DNA methyltransferase	other
UniRef90	UHGV-0016773_30	UniRef90_A0A7J2R6L5	72.8	3.73e-16	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0016773_30	748224.HMPREF9436_03069	99.8	1.25e-25	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0016773_30	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0016773_31	K01520	137.8	8.19998e-41	dut, DUT; dUTP pyrophosphatase [EC:3.6.1.23]	N/A
PHROG	UHGV-0016773_31	phrog_135	120.2	1.2e-35	dUTPase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016773_31	UniRef90_UPI001D07FBC5	192.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-0016773_31	887929.HMP0721_1278	171.0	0	dUTPase	N/A
Pfam	UHGV-0016773_31	PF00692	N/A	N/A	dUTPase	dUTPase
NCBIFam	UHGV-0016773_31	TIGR00576.1	N/A	N/A	dUTP diphosphatase	N/A
COG	UHGV-0016773_31	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-0016773_31	PF00692,MF_00116,TIGR00576,COG0756	N/A	N/A	N/A	N/A
KOfam	UHGV-0016773_34	K03111	154.8	1.4013e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0016773_34	phrog_44	153.0	1.4013e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016773_34	UniRef90_A0A1Y4W0N5	184.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0016773_34	877414.ATWA01000008_gene232	173.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0016773_34	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0016773_34	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0016773_34	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0016773_34	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0016773_34	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_36	phrog_4632	50.7	0.0000000000000016	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016773_36	UniRef90_A0A7X8IB41	116.0	4.77e-31	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0016773_36	469604.HMPREF0946_00819	55.1	0.0000000664	N/A	N/A
structural_annotation	UHGV-0016773_36	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_38	phrog_9804	161.6	0	N/A	unknown function
UniRef90	UHGV-0016773_38	UniRef90_UPI001E312ACC	192.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0016773_38	1121344.JHZO01000003_gene981	187.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0016773_38	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0016773_38	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_39	phrog_9474	78.0	1.3e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016773_39	UniRef90_A0A417HNC3	132.0	1.19e-34	N/A	N/A
eggNOG-mapper	UHGV-0016773_39	411483.FAEPRAA2165_01877	94.7	3.96e-20	HNH endonuclease	N/A
Pfam	UHGV-0016773_39	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0016773_39	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0016773_39	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_40	phrog_398	153.4	1.4013e-45	N/A	unknown function
UniRef90	UHGV-0016773_40	UniRef90_UPI00137B6F1E	356.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0016773_40	1485543.JMME01000021_gene802	173.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0016773_40	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0016773_40	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_41	phrog_7838	124.5	8.5e-37	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016773_41	UniRef90_A0A8D9UGW3	193.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0016773_41	742767.HMPREF9456_02052	135.0	8.87e-37	N/A	N/A
structural_annotation	UHGV-0016773_41	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_42	phrog_2205	75.2	5.1e-22	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0016773_42	UniRef90_A0A1I0CLP3	69.7	0.0000000000095	Bacteriophage Mu Gam like protein	N/A
eggNOG-mapper	UHGV-0016773_42	568816.Acin_1854	61.6	0.00000000121	Bacteriophage Mu Gam like protein	N/A
Pfam	UHGV-0016773_42	PF07352	N/A	N/A	Bacteriophage Mu Gam like protein	Phage_Mu_Gam
structural_annotation	UHGV-0016773_42	PF07352	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016773_46	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016773_47	UniRef90_UPI001BB476C3	87.0	3.91e-21	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0016773_47	1007096.BAGW01000023_gene157	67.0	0.0000000000000424	N/A	N/A
structural_annotation	UHGV-0016773_47	TIGR03070	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_48	phrog_8	47.7	0.00000000000033	transcriptional regulator	transcription regulation
UniRef90	UHGV-0016773_48	UniRef90_UPI001BB477F6	128.0	7.77e-36	helix-turn-helix domain-containing protein	N/A
Pfam	UHGV-0016773_48	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0016773_48	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0016773_48	PF12844,NF007257,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0016773_49	UniRef90_R6MXZ6	125.0	1.58e-30	J domain-containing protein	N/A
eggNOG-mapper	UHGV-0016773_49	1230338.MOMA_05821	78.2	0.0000000000000544	heat shock protein binding	N/A
COG	UHGV-0016773_49	COG0484	N/A	N/A	DnaJ-class molecular chaperone with C-terminal Zn finger domain	N/A
KOfam	UHGV-0016773_50	K14059	234.9	0	int; integrase	N/A
PHROG	UHGV-0016773_50	phrog_1	221.9	0	integrase	integration and excision
UniRef90	UHGV-0016773_50	UniRef90_A0A845RE39	496.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0016773_50	1321814.HMPREF9089_00905	209.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0016773_50	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0016773_50	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0016773_50	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0016773_50	PF00589,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0016773_51	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_52	phrog_20016	196.2	0	N/A	unknown function
UniRef90	UHGV-0016773_52	UniRef90_A0A285PT46	195.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0016773_52	397290.C810_05214	172.0	0	N/A	N/A
structural_annotation	UHGV-0016773_52	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0016773_53	phrog_16490	139.8	3.89981e-42	N/A	unknown function
eggNOG-mapper	UHGV-0016773_53	1408437.JNJN01000043_gene803	138.0	1.53e-37	N/A	N/A
PHROG	UHGV-0016773_54	phrog_22984	81.2	8.4e-24	N/A	unknown function
PHROG	UHGV-0016773_55	phrog_21718	110.3	1.5e-32	N/A	unknown function
eggNOG-mapper	UHGV-0016773_55	397290.C810_05210	91.3	2.12e-21	N/A	N/A
PHROG	UHGV-0016773_56	phrog_3754	107.2	1.3e-31	N/A	unknown function
eggNOG-mapper	UHGV-0016773_56	476272.RUMHYD_01764	163.0	0	N/A	N/A
UniRef90	UHGV-0016773_57	UniRef90_A0A658JVX5	97.8	4.79e-25	Sigma-70 family RNA polymerase sigma factor	N/A
Pfam	UHGV-0016773_57	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
PHROG	UHGV-0016773_58	phrog_22978	1078.3	0	N/A	unknown function
UniRef90	UHGV-0016773_58	UniRef90_A0A3D4D8G0	587.0	0	PBECR5 domain-containing protein	N/A
eggNOG-mapper	UHGV-0016773_58	1519439.JPJG01000060_gene1905	531.0	0	N/A	N/A
Pfam	UHGV-0016773_58	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0016773_58	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
eggNOG-mapper	UHGV-0016773_59	1226322.HMPREF1545_00786	125.0	1.44e-28	N/A	N/A
PHROG	UHGV-0016773_61	phrog_511	156.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0016773_61	1226322.HMPREF1545_00785	188.0	0	N/A	N/A
structural_annotation	UHGV-0016773_61	PF11134,NF008351,COG1520,COG5156	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0016773	Yes	49,007	60	100	1