vOTU vOTU-066988

vOTU: vOTU-066988

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-066988
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00098 → vSUBFAM-00525 → vGENUS-01773 → vSUBGEN-01038 → vOTU-066988
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp000432375
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0087969
Biosample ID	SAMEA3449274
Genome length (bp)	23,529 bps
CheckV completeness	99.90% (High-quality)
CDS count	32
CDS density	90.71%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lutetiensis	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp000432375	Total connections	5	Host agreement	80

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0087969_1	K04763	152.6	4.2039e-45	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0087969_1	phrog_1	148.2	7.00649e-44	integrase	integration and excision
UniRef90	UHGV-0087969_1	UniRef90_A0A1C6HMW3	330.0	0	Tyrosine recombinase XerC	N/A
eggNOG-mapper	UHGV-0087969_1	1378168.N510_01454	337.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0087969_1	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0087969_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0087969_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0087969_1	PF00589,PF13495,MF_01808,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0087969_3	PF18903	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_4	phrog_15768	54.4	0.0000000000000033	N/A	unknown function
Pfam	UHGV-0087969_4	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0087969_4	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
PHROG	UHGV-0087969_8	phrog_2412	52.2	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0087969_8	556268.OFAG_00320	52.4	0.000000599	N/A	N/A
KOfam	UHGV-0087969_9	K06909	356.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0087969_9	phrog_3717	190.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0087969_9	UniRef90_A0A843HNT5	417.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0087969_9	86416.Clopa_1892	325.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0087969_9	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0087969_9	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0087969_9	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0087969_9	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0087969_9	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0087969_10	PF21226,TIGR04183,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_15	phrog_64	362.6	0	portal protein	head and packaging
UniRef90	UHGV-0087969_15	UniRef90_A0A843HXP9	404.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0087969_15	552398.HMPREF0866_03118	209.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0087969_15	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0087969_15	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0087969_15	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_16	phrog_115	162.3	0	minor head protein	head and packaging
UniRef90	UHGV-0087969_16	UniRef90_UPI0001C4EC79	118.0	5.06e-27	minor capsid protein	N/A
eggNOG-mapper	UHGV-0087969_16	397287.C807_03710	152.0	2.31004e-41	Type VI secretion system effector, Hcp	N/A
Pfam	UHGV-0087969_16	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0087969_16	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0087969_16	COG3157	N/A	N/A	Type VI protein secretion system component Hcp (secreted cytotoxin)	N/A
structural_annotation	UHGV-0087969_16	PF03496,PF04233,MF_04142,NF041404,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0087969_17	1514668.JOOA01000001_gene690	97.4	1.6e-25	N/A	N/A
PHROG	UHGV-0087969_18	phrog_172	98.5	9.6e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0087969_18	UniRef90_UPI00085C378A	149.0	2.12997e-42	N/A	N/A
eggNOG-mapper	UHGV-0087969_18	1071400.LBUCD034_0949	67.8	0.0000000000264	N/A	N/A
Pfam	UHGV-0087969_18	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0087969_18	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_19	phrog_544	71.2	1.5e-20	major head protein	head and packaging
UniRef90	UHGV-0087969_19	UniRef90_A0A6N3FT63	232.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0087969_19	642492.Clole_0972	315.0	0	N/A	N/A
structural_annotation	UHGV-0087969_19	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_20	phrog_132	53.0	0.000000000000006	head-tail adaptor	connector
UniRef90	UHGV-0087969_20	UniRef90_A0A1M6EXQ4	68.2	0.00000000000067	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0087969_20	1540257.JQMW01000009_gene3373	61.6	0.0000000000404	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0087969_20	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0087969_20	PF05135,TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0087969_21	1280689.AUJC01000007_gene3314	48.9	0.0000037	N/A	N/A
structural_annotation	UHGV-0087969_21	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_22	phrog_5	95.1	8.4e-28	tail completion or Neck1 protein	connector
UniRef90	UHGV-0087969_22	UniRef90_A0A136Q8F4	109.0	7.4e-28	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0087969_22	1443125.Z962_05620	90.5	2.26e-21	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0087969_22	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0087969_22	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0087969_22	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0087969_23	1329516.JPST01000016_gene402	50.4	0.00000269	N/A	N/A
structural_annotation	UHGV-0087969_23	PF09646,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_24	phrog_158	51.5	0.000000000000021	major tail protein	tail
UniRef90	UHGV-0087969_24	UniRef90_UPI0005906553	89.7	2.32e-20	tail protein	N/A
eggNOG-mapper	UHGV-0087969_24	1499683.CCFF01000017_gene2926	89.7	3.88e-21	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0087969_24	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0087969_25	UniRef90_A0A0P0NA82	70.9	0.00000000000017	N/A	N/A
eggNOG-mapper	UHGV-0087969_25	1123304.AQYA01000037_gene231	87.8	6.97e-21	N/A	N/A
Pfam	UHGV-0087969_25	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0087969_25	PF19591,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_26	phrog_2066	75.8	5.8e-22	N/A	unknown function
eggNOG-mapper	UHGV-0087969_26	1499683.CCFF01000017_gene2924	70.1	0.000000000000061	N/A	N/A
KOfam	UHGV-0087969_27	K08757	49.2	0.0000000000000045	APOA1; apolipoprotein A-I	N/A
PHROG	UHGV-0087969_27	phrog_3981	266.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0087969_27	UniRef90_UPI001F18B975	286.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0087969_27	536233.CLO_1577	286.0	0	tape measure	N/A
COG	UHGV-0087969_27	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0087969_27	MF_04138	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0087969_28	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_29	phrog_15074	119.4	1.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-0087969_29	411901.BACCAC_01130	144.0	1.4e-32	COG3209 Rhs family protein	N/A
COG	UHGV-0087969_29	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0087969_30	phrog_372	249.4	0	tail protein	tail
UniRef90	UHGV-0087969_30	UniRef90_UPI001373A0FD	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-0087969_30	556261.HMPREF0240_01282	160.0	1.68e-39	N/A	N/A
Pfam	UHGV-0087969_30	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0087969_30	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0087969_30	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0087969_32	phrog_13256	82.4	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0087969_32	1160721.RBI_II00522	74.3	7.06e-17	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0087969	Yes	23,529	40	100	1
UHGV-1400312	No	17,914	39	76	1