vOTU vOTU-067247

vOTU: vOTU-067247

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-067247
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium → Phascolarctobacterium faecium
Taxonomy (UHGV)	vFAM-00154 → vSUBFAM-07086 → vGENUS-19072 → vSUBGEN-36666 → vOTU-067247
Host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium → Phascolarctobacterium faecium
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0195554
Biosample ID	SAMN01779870
Genome length (bp)	35,757 bps
CheckV completeness	99.90% (High-quality)
CDS count	48
CDS density	94.45%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_C → Negativicutes → Acidaminococcales → Acidaminococcaceae → Phascolarctobacterium → Phascolarctobacterium faecium	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0195554_1	phrog_3675	111.8	2.5e-33	N/A	unknown function
UniRef90	UHGV-0195554_1	UniRef90_UPI001C02868E	109.0	4.63e-29	YjcQ family protein	N/A
eggNOG-mapper	UHGV-0195554_1	1122173.AXVL01000018_gene435	97.4	5.2e-25	YjcQ protein	N/A
Pfam	UHGV-0195554_1	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-0195554_1	PF09639,TIGR04176,COG2345	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0195554_2	568816.Acin_1817	67.4	0.00000000000116	N/A	N/A
KOfam	UHGV-0195554_3	K08640	106.8	2.9e-31	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0195554_3	phrog_894	84.0	2e-24	endolysin	lysis
UniRef90	UHGV-0195554_3	UniRef90_R5BE69	101.0	4.03e-25	Peptidase M15A	N/A
eggNOG-mapper	UHGV-0195554_3	350688.Clos_1309	94.0	6.71e-23	Peptidase M15A	N/A
Pfam	UHGV-0195554_3	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0195554_3	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0195554_3	PF08291,NF000086,COG3108	N/A	N/A	N/A	N/A
Pfam	UHGV-0195554_6	PF13385	N/A	N/A	Concanavalin A-like lectin/glucanases superfamily	Laminin_G_3
structural_annotation	UHGV-0195554_7	PF12245,TIGR04183	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0195554_8	PF14301	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_9	phrog_13336	51.7	2.2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0195554_9	568816.Acin_1904	96.7	1.23e-20	N/A	N/A
eggNOG-mapper	UHGV-0195554_10	568816.Acin_1226	440.0	0	N/A	N/A
structural_annotation	UHGV-0195554_10	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-0195554_11	UniRef90_A0A7X7U7G6	320.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-0195554_11	568816.Acin_1906	264.0	0	Phage tail protein	N/A
structural_annotation	UHGV-0195554_11	PF20753,PF19512,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_12	phrog_12798	410.1	0	N/A	unknown function
UniRef90	UHGV-0195554_12	UniRef90_R5ARS7	943.0	0	Putative tail length tape measure protein	N/A
eggNOG-mapper	UHGV-0195554_12	457415.HMPREF1006_00474	301.0	0	tape measure	N/A
Pfam	UHGV-0195554_12	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0195554_12	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0195554_12	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0195554_12	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_14	phrog_2115	59.5	6.7e-17	tail protein	tail
structural_annotation	UHGV-0195554_14	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_15	phrog_1407	115.8	1.7e-34	major tail protein	tail
UniRef90	UHGV-0195554_15	UniRef90_R6I4H1	338.0	0	Phage major tail protein TP901-1 family	N/A
eggNOG-mapper	UHGV-0195554_15	1262914.BN533_00191	338.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0195554_15	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
COG	UHGV-0195554_15	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
PHROG	UHGV-0195554_16	phrog_176	60.2	3.2e-17	tail terminator	connector
structural_annotation	UHGV-0195554_16	PF16807	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_17	phrog_5	68.2	1.6e-19	tail completion or Neck1 protein	connector
UniRef90	UHGV-0195554_17	UniRef90_UPI000F0C5A82	140.0	1.28e-39	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0195554_17	1262914.BN533_00193	119.0	2.9e-32	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0195554_17	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0195554_17	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
COG	UHGV-0195554_17	COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0195554_17	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_18	phrog_25	61.3	1.7e-17	head closure Hc1	connector
Pfam	UHGV-0195554_18	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
COG	UHGV-0195554_18	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0195554_18	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_19	phrog_40	83.2	1.7e-24	head-tail adaptor Ad1	connector
UniRef90	UHGV-0195554_19	UniRef90_UPI0019823240	97.4	3.57e-22	head-tail connector protein	N/A
eggNOG-mapper	UHGV-0195554_19	1262914.BN533_00195	160.0	0	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0195554_19	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
NCBIFam	UHGV-0195554_19	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-0195554_19	PF05135,TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_20	phrog_10	213.1	0	major head protein	head and packaging
UniRef90	UHGV-0195554_20	UniRef90_UPI000F0C831E	506.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-0195554_20	1121271.AUCM01000008_gene3245	198.0	0	phage major capsid protein, HK97	N/A
Pfam	UHGV-0195554_20	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0195554_20	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0195554_20	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0195554_20	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0195554_21	K06904	42.2	0.000000000011	N/A	N/A
PHROG	UHGV-0195554_21	phrog_4523	142.9	2.49992e-42	major head and protease protein	head and packaging
UniRef90	UHGV-0195554_21	UniRef90_UPI000F0CB78B	256.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0195554_21	457415.HMPREF1006_02476	180.0	0	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0195554_21	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
COG	UHGV-0195554_21	COG3087	N/A	N/A	Cell division protein FtsN	N/A
PHROG	UHGV-0195554_22	phrog_12	351.9	0	portal protein	head and packaging
UniRef90	UHGV-0195554_22	UniRef90_A0A7X6ZHF9	377.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0195554_22	1286171.EAL2_c19660	362.0	0	Phage portal protein	N/A
Pfam	UHGV-0195554_22	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0195554_22	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0195554_22	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0195554_22	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_23	phrog_9	368.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0195554_23	UniRef90_R6J449	729.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0195554_23	1262914.BN533_00200	729.0	0	terminase, large subunit	N/A
Pfam	UHGV-0195554_23	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0195554_23	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0195554_23	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0195554_23	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_24	phrog_83	55.6	3.4e-17	terminase small subunit	head and packaging
UniRef90	UHGV-0195554_24	UniRef90_A0A7X9I6W6	89.7	5.2e-20	Phage terminase small subunit P27 family	N/A
eggNOG-mapper	UHGV-0195554_24	1124578.H0USW2_9CAUD	59.3	0.00000000676	Phage terminase, small subunit	N/A
Pfam	UHGV-0195554_24	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-0195554_24	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
KOfam	UHGV-0195554_25	K07451	42.0	0.000000000017	mcrA; 5-methylcytosine-specific restriction enzyme A [EC:3.1.21.-]	N/A
PHROG	UHGV-0195554_25	phrog_144	102.8	2.6e-30	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195554_25	UniRef90_R6IEU0	177.0	0	Holin protein	N/A
eggNOG-mapper	UHGV-0195554_25	1262914.BN533_00202	177.0	0	HNH nucleases	N/A
Pfam	UHGV-0195554_25	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-0195554_25	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0195554_25	PF01844,COG1403	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_26	phrog_248	45.1	0.0000000000014	transcriptional activator	transcription regulation
UniRef90	UHGV-0195554_26	UniRef90_UPI001C060AA3	99.0	2.48e-23	N/A	N/A
eggNOG-mapper	UHGV-0195554_26	484770.UFO1_1680	105.0	8.23e-27	N/A	N/A
structural_annotation	UHGV-0195554_26	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_27	phrog_38815	62.7	5.9e-18	N/A	unknown function
PHROG	UHGV-0195554_28	phrog_35896	91.9	8.6e-27	N/A	unknown function
PHROG	UHGV-0195554_29	phrog_36825	124.4	1.7e-37	N/A	unknown function
UniRef90	UHGV-0195554_29	UniRef90_A0A2A9CJA6	76.3	0.00000000000235	DnaD/phage-associated family protein	N/A
eggNOG-mapper	UHGV-0195554_29	1151292.QEW_3765	64.3	0.00000000263	DnaD domain protein	N/A
COG	UHGV-0195554_29	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0195554_29	PF19481,PF04492,TIGR01610,COG5529	N/A	N/A	N/A	N/A
KOfam	UHGV-0195554_30	K02338	94.3	1.6e-27	dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]	N/A
PHROG	UHGV-0195554_30	phrog_947	86.8	2e-26	DNA polymerase processivity factor	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195554_30	UniRef90_R6IEU2	199.0	0	DNA polymerase III subunit beta	N/A
COG	UHGV-0195554_30	COG0592	N/A	N/A	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	N/A
structural_annotation	UHGV-0195554_30	PF02768,PF00712,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
KOfam	UHGV-0195554_31	K03111	148.3	7.42688e-44	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0195554_31	phrog_44	140.6	8.89965e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0195554_31	UniRef90_A0A3G9HAR8	197.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0195554_31	1262914.BN533_00181	197.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0195554_31	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0195554_31	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0195554_31	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0195554_31	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0195554_31	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0195554_33	NF007260	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0195554_34	MF_02014,NF010723,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0195554_37	phrog_16447	108.7	1.6e-32	N/A	unknown function
UniRef90	UHGV-0195554_37	UniRef90_A0A357Y3I5	98.2	1.23e-22	N/A	N/A
eggNOG-mapper	UHGV-0195554_37	768486.EHR_00810	87.4	3.68e-19	N/A	N/A
Pfam	UHGV-0195554_37	PF10083	N/A	N/A	N/A	DUF2321
COG	UHGV-0195554_37	COG4306	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0195554_37	PF10083,COG4306	N/A	N/A	N/A	N/A
UniRef90	UHGV-0195554_40	UniRef90_A0A3A9EJD0	80.1	3.42e-18	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0195554_40	411468.CLOSCI_00580	48.9	0.00000121	BetR domain	N/A
KOfam	UHGV-0195554_41	K22300	71.7	1.4e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0195554_41	phrog_8	54.4	0.0000000000000028	transcriptional regulator	transcription regulation
UniRef90	UHGV-0195554_41	UniRef90_A0A642A549	149.0	3.92364e-44	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0195554_41	411468.CLOSCI_00581	75.9	6.51e-16	helix-turn-helix	N/A
Pfam	UHGV-0195554_41	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0195554_41	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0195554_41	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0195554_43	511680.BUTYVIB_00291	110.0	8.63e-24	N/A	N/A
eggNOG-mapper	UHGV-0195554_44	1121342.AUCO01000010_gene2251	214.0	0	N/A	N/A
Pfam	UHGV-0195554_45	PF09509	N/A	N/A	N/A	Hypoth_Ymh
eggNOG-mapper	UHGV-0195554_46	1501230.ET33_22815	218.0	0	N/A	N/A
KOfam	UHGV-0195554_47	K06400	309.8	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0195554_47	phrog_95	297.3	0	integrase	integration and excision
UniRef90	UHGV-0195554_47	UniRef90_A0A1Y4B4X9	358.0	0	DNA integration/recombination protein	N/A
eggNOG-mapper	UHGV-0195554_47	411483.FAEPRAA2165_02542	344.0	0	N/A	N/A
Pfam	UHGV-0195554_47	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0195554_47	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0195554_47	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0195554_47	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0195554_47	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0195554_48	K03327	125.2	5.3e-37	TC.MATE, SLC47A, norM, mdtK, dinF; multidrug resistance protein, MATE family	N/A
PHROG	UHGV-0195554_48	phrog_6241	157.5	0	N/A	unknown function
UniRef90	UHGV-0195554_48	UniRef90_R6HDU9	592.0	0	Mate efflux family protein	N/A
eggNOG-mapper	UHGV-0195554_48	1262915.BN574_00014	592.0	0	Mate efflux family protein	N/A
Pfam	UHGV-0195554_48	PF01554	N/A	N/A	MatE	MatE
NCBIFam	UHGV-0195554_48	TIGR00797.1	N/A	N/A	MATE family efflux transporter	N/A
COG	UHGV-0195554_48	COG0534	N/A	N/A	Na+-driven multidrug efflux pump, DinF/NorM/MATE family	N/A
structural_annotation	UHGV-0195554_48	PF03023,MF_00400,NF041801,COG0534	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0195554	Yes	35,757	38	100	1
UHGV-0144915	No	10,290	41	30	1