vOTU vOTU-067474

vOTU: vOTU-067474

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-067474
Number of genomes	3
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00010 → vSUBFAM-00172 → vGENUS-00833 → vSUBGEN-31312 → vOTU-067474
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0176023
Biosample ID	N/A
Genome length (bp)	39,040 bps
CheckV completeness	90.39% (High-quality)
CDS count	69
CDS density	90.81%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	155	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.39)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0176023_1	phrog_2113	57.8	1.6e-16	N/A	unknown function
eggNOG-mapper	UHGV-0176023_1	1160721.RBI_II00485	53.5	0.000000121	N/A	N/A
structural_annotation	UHGV-0176023_1	PF21715,TIGR04176,COG1654	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_2	phrog_244	69.7	6.3e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0176023_2	742740.HMPREF9474_03491	183.0	0	N/A	N/A
structural_annotation	UHGV-0176023_2	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_3	phrog_15768	91.2	8.4e-34	N/A	unknown function
UniRef90	UHGV-0176023_3	UniRef90_R6RVQ1	195.0	0	Chromosome segregation ATPases	N/A
eggNOG-mapper	UHGV-0176023_3	397291.C804_01603	67.8	0.0000000000788	DnaD domain protein	N/A
AcrCatalog	UHGV-0176023_3	cluster_14472	147.0	1.4013e-45	NA	N/A
Pfam	UHGV-0176023_3	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0176023_3	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0176023_3	PF19808	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176023_4	610130.Closa_1382	47.8	0.00000203	N/A	N/A
structural_annotation	UHGV-0176023_4	PF18350,MF_00754,NF003018	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176023_6	UniRef90_UPI0018C75AF4	103.0	8.03e-28	Lar family restriction alleviation protein	N/A
structural_annotation	UHGV-0176023_6	NF007260	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176023_7	UniRef90_A0A3R6V2Q9	109.0	1.58e-30	CopG family transcriptional regulator	N/A
Pfam	UHGV-0176023_7	PF01402	N/A	N/A	Ribbon-helix-helix protein, copG family	RHH_1
structural_annotation	UHGV-0176023_7	PF01402,NF041793,COG4710	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-0176023_9	cluster_11670	50.4	0.0000000000506	NA	N/A
KOfam	UHGV-0176023_11	K04763	42.1	0.000000000014	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0176023_11	phrog_216	46.0	0.00000000000087	integrase	integration and excision
eggNOG-mapper	UHGV-0176023_11	742733.HMPREF9469_01832	98.2	1.43e-25	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0176023_11	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0176023_11	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
PHROG	UHGV-0176023_12	phrog_23747	82.6	4.8e-24	N/A	unknown function
UniRef90	UHGV-0176023_12	UniRef90_A0A7Y9A9N6	80.9	6.1e-17	Magnesium-transporting ATPase (P-type)	N/A
structural_annotation	UHGV-0176023_12	NF040944	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176023_14	UniRef90_UPI00067F0C72	82.4	5.02e-17	N/A	N/A
AcrCatalog	UHGV-0176023_15	cluster_12174	91.3	1.6e-27	NA	N/A
structural_annotation	UHGV-0176023_15	MF_01194,NF010729	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_17	phrog_33130	97.9	4.7e-29	N/A	unknown function
UniRef90	UHGV-0176023_17	UniRef90_A0A3B9CD52	78.2	3.6e-17	S1-like domain-containing protein	N/A
structural_annotation	UHGV-0176023_17	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-0176023_18	K07474	99.8	5.7e-29	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0176023_18	phrog_51	108.5	6.3e-32	terminase small subunit	head and packaging
UniRef90	UHGV-0176023_18	UniRef90_A0A416ZL36	145.0	2.81941e-42	Terminase small subunit	N/A
eggNOG-mapper	UHGV-0176023_18	476272.RUMHYD_01754	140.0	3.00999e-41	Terminase small subunit	N/A
Pfam	UHGV-0176023_18	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0176023_18	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0176023_18	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-0176023_19	K06909	331.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0176023_19	phrog_3717	159.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-0176023_19	UniRef90_A0A395X9V4	787.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0176023_19	397291.C804_01612	410.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0176023_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-0176023_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0176023_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0176023_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176023_20	PF20384,TIGR02608	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_21	phrog_533	284.6	0	portal protein	head and packaging
UniRef90	UHGV-0176023_21	UniRef90_A0A1C6CDM8	689.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-0176023_21	33035.JPJF01000106_gene3135	506.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-0176023_21	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_22	phrog_14030	167.2	0	N/A	unknown function
UniRef90	UHGV-0176023_22	UniRef90_UPI001F3A7341	285.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0176023_22	411468.CLOSCI_01513	236.0	0	N/A	N/A
Pfam	UHGV-0176023_22	PF19127	N/A	N/A	Choline-binding repeat	Choline_bind_3
structural_annotation	UHGV-0176023_22	PF19127	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176023_23	476272.RUMHYD_00002	108.0	1.59e-22	N/A	N/A
PHROG	UHGV-0176023_26	phrog_581	260.5	0	minor head protein	head and packaging
UniRef90	UHGV-0176023_26	UniRef90_A0A1C6CDG2	574.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0176023_26	33035.JPJF01000106_gene3134	436.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0176023_26	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0176023_26	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176023_26	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_27	phrog_3754	109.0	3.8e-32	N/A	unknown function
eggNOG-mapper	UHGV-0176023_27	476272.RUMHYD_01764	184.0	0	N/A	N/A
UniRef90	UHGV-0176023_29	UniRef90_A0A417UWY7	126.0	1.82e-35	CTP synthase	N/A
eggNOG-mapper	UHGV-0176023_29	476272.RUMHYD_01766	59.3	0.000000000533	N/A	N/A
UniRef90	UHGV-0176023_30	UniRef90_A0A843HPX3	66.2	0.000000000000601	Sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0176023_30	1235790.C805_00057	50.4	0.000000178	N/A	N/A
structural_annotation	UHGV-0176023_30	PF13404,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_31	phrog_13890	45.9	0.00000000000077	N/A	unknown function
UniRef90	UHGV-0176023_31	UniRef90_A0A6L6LMN7	49.7	0.00000128	Antitoxin	N/A
structural_annotation	UHGV-0176023_31	PF01402,NF010256	N/A	N/A	N/A	N/A
UniRef90	UHGV-0176023_33	UniRef90_R6RYB6	59.7	0.00000000544	Thermophilus bacteriophage protein	N/A
eggNOG-mapper	UHGV-0176023_33	411470.RUMGNA_03785	55.1	0.0000000623	N/A	N/A
PHROG	UHGV-0176023_34	phrog_21718	131.9	3.5e-39	N/A	unknown function
eggNOG-mapper	UHGV-0176023_34	397290.C810_05210	131.0	1.16e-36	N/A	N/A
PHROG	UHGV-0176023_35	phrog_22984	83.3	7.7e-25	N/A	unknown function
PHROG	UHGV-0176023_36	phrog_16490	181.3	0	N/A	unknown function
eggNOG-mapper	UHGV-0176023_36	397290.C810_01328	179.0	0	N/A	N/A
PHROG	UHGV-0176023_37	phrog_20016	190.0	0	N/A	unknown function
UniRef90	UHGV-0176023_37	UniRef90_A0A285PT46	150.0	2.66247e-44	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0176023_37	397290.C810_05214	166.0	0	N/A	N/A
structural_annotation	UHGV-0176023_37	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_38	phrog_28802	229.6	0	N/A	unknown function
eggNOG-mapper	UHGV-0176023_38	476272.RUMHYD_01772	202.0	0	N/A	N/A
PHROG	UHGV-0176023_39	phrog_194	71.0	2.3e-20	head scaffolding protein	head and packaging
UniRef90	UHGV-0176023_39	UniRef90_UPI001D14C9C8	178.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0176023_39	476272.RUMHYD_01775	180.0	0	COG NOG36366 non supervised orthologous group	N/A
Pfam	UHGV-0176023_39	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0176023_39	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_40	phrog_544	149.9	1.96182e-44	major head protein	head and packaging
UniRef90	UHGV-0176023_40	UniRef90_A0A395X7A1	582.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0176023_40	1232453.BAIF02000011_gene3359	377.0	0	N/A	N/A
Pfam	UHGV-0176023_40	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-0176023_40	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_41	phrog_541	95.5	4e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0176023_41	476272.RUMHYD_01778	118.0	1.37e-31	N/A	N/A
PHROG	UHGV-0176023_42	phrog_419	103.3	2.8e-30	N/A	unknown function
UniRef90	UHGV-0176023_42	UniRef90_A0A4U9RIR3	121.0	4.7e-34	N/A	N/A
eggNOG-mapper	UHGV-0176023_42	476272.RUMHYD_03324	124.0	8.3e-36	N/A	N/A
structural_annotation	UHGV-0176023_42	PF14083	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_43	phrog_18218	140.0	6.39973e-42	N/A	unknown function
UniRef90	UHGV-0176023_43	UniRef90_A0A8D9PGR5	158.0	0	Holin	N/A
eggNOG-mapper	UHGV-0176023_43	411902.CLOBOL_03424	81.3	1.67e-18	N/A	N/A
structural_annotation	UHGV-0176023_43	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_44	phrog_3366	91.2	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0176023_44	476272.RUMHYD_01779	155.0	0	N/A	N/A
structural_annotation	UHGV-0176023_44	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_45	phrog_556	71.4	9.6e-21	minor head protein	head and packaging
UniRef90	UHGV-0176023_45	UniRef90_UPI0008B4CFF0	196.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-0176023_45	476272.RUMHYD_01780	166.0	0	N/A	N/A
Pfam	UHGV-0176023_45	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0176023_45	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_46	phrog_3266	92.8	2.7e-27	tail completion	connector
eggNOG-mapper	UHGV-0176023_46	476272.RUMHYD_01781	140.0	2.69999e-40	N/A	N/A
structural_annotation	UHGV-0176023_46	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_47	phrog_3099	117.6	9.2e-35	N/A	unknown function
eggNOG-mapper	UHGV-0176023_47	33035.JPJF01000106_gene3126	191.0	0	N/A	N/A
structural_annotation	UHGV-0176023_47	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_48	phrog_11299	68.8	9e-20	N/A	unknown function
eggNOG-mapper	UHGV-0176023_48	476272.RUMHYD_01783	73.2	0.000000000000019	N/A	N/A
structural_annotation	UHGV-0176023_48	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_49	phrog_706	129.8	1.7e-38	N/A	unknown function
UniRef90	UHGV-0176023_49	UniRef90_A0A1C6CG51	234.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0176023_49	411459.RUMOBE_01383	206.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0176023_49	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0176023_49	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_50	phrog_1535	345.7	0	tail length tape measure protein	tail
UniRef90	UHGV-0176023_50	UniRef90_A0A1C6CG40	281.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-0176023_50	1304866.K413DRAFT_3046	277.0	0	N/A	N/A
COG	UHGV-0176023_50	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0176023_50	PF11172	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_51	phrog_1194	57.7	2e-16	N/A	unknown function
eggNOG-mapper	UHGV-0176023_51	1304866.K413DRAFT_3047	106.0	9.5e-28	N/A	N/A
Pfam	UHGV-0176023_51	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0176023_51	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_52	phrog_18190	277.7	0	N/A	unknown function
UniRef90	UHGV-0176023_52	UniRef90_UPI001D15C06A	582.0	0	tail fiber domain-containing protein	N/A
eggNOG-mapper	UHGV-0176023_52	742733.HMPREF9469_01807	399.0	0	N/A	N/A
Pfam	UHGV-0176023_52	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
structural_annotation	UHGV-0176023_52	PF14594,NF033848,COG3501	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_54	phrog_17196	81.7	9e-24	kinase	other
UniRef90	UHGV-0176023_54	UniRef90_A0A2M8Z316	133.0	7.21e-34	Collagen triple helix repeat protein	N/A
eggNOG-mapper	UHGV-0176023_54	1304866.K413DRAFT_3051	132.0	3.34e-34	N/A	N/A
structural_annotation	UHGV-0176023_54	PF13619,COG3536	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176023_55	742733.HMPREF9469_01801	83.2	1.03e-16	N/A	N/A
KOfam	UHGV-0176023_57	K14059	151.6	9.80909e-45	int; integrase	N/A
PHROG	UHGV-0176023_57	phrog_1	149.2	3.64338e-44	integrase	integration and excision
UniRef90	UHGV-0176023_57	UniRef90_A0A396QHT0	427.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0176023_57	1304866.K413DRAFT_1180	385.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0176023_57	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0176023_57	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0176023_57	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0176023_60	K08981	45.0	0.0000000000011	K08981; putative membrane protein	N/A
PHROG	UHGV-0176023_60	phrog_3707	49.4	0.000000000000065	membrane-flanked domain	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0176023_60	UniRef90_A0A1I0J6E3	86.7	1.22e-18	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-0176023_60	1077974.GOEFS_128_00120	70.9	0.000000000000324	Bacterial PH domain	N/A
Pfam	UHGV-0176023_60	PF03703	N/A	N/A	Bacterial PH domain	bPH_2
COG	UHGV-0176023_60	COG3428	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176023_60	PF03703,MF_01071,NF040894,COG3402	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_61	phrog_87	67.9	1.2e-19	metallo-protease	other
UniRef90	UHGV-0176023_61	UniRef90_A0A173TZ87	140.0	5.43e-40	Metallopeptidase immA	N/A
eggNOG-mapper	UHGV-0176023_61	476272.RUMHYD_01733	112.0	7.19e-30	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0176023_61	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0176023_61	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0176023_61	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0176023_62	K22300	49.3	0.00000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0176023_62	phrog_8	63.1	6.4e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0176023_62	UniRef90_A0A6N7WA07	139.0	9.63e-40	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0176023_62	411460.RUMTOR_02056	119.0	7.21e-33	Bacteriophage CI repressor helix-turn-helix domain	N/A
Pfam	UHGV-0176023_62	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0176023_62	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0176023_62	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0176023_63	phrog_8	56.0	0.0000000000000011	transcriptional regulator	transcription regulation
UniRef90	UHGV-0176023_63	UniRef90_A0A5M9HYA8	98.2	1.04e-25	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0176023_63	1304866.K413DRAFT_3003	73.9	4.77e-16	addiction module antidote protein HigA	N/A
Pfam	UHGV-0176023_63	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0176023_63	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
structural_annotation	UHGV-0176023_63	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176023_64	COG1321	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0176023_66	PF13601,TIGR04176	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0176023_69	742735.HMPREF9467_00844	112.0	4.95e-28	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0176023	Yes	39,040	45	90	1
UHGV-0199036	No	29,316	47	67	1
UHGV-0198775	No	19,568	44	45	1