vOTU vOTU-067623

vOTU: vOTU-067623

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-067623
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00013 → vGENUS-00034 → vSUBGEN-06153 → vOTU-067623
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0189167
Biosample ID	SAMN09781772
Genome length (bp)	39,436 bps
CheckV completeness	93.28% (High-quality)
CDS count	68
CDS density	91.55%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium	Total connections	785	Host agreement	98.85
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.28)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0189167_1	K02086	65.8	7.2e-19	dnaD; DNA replication protein	N/A
PHROG	UHGV-0189167_1	phrog_186	69.9	5.5e-20	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0189167_1	563038.HMPREF0851_01045	52.0	0.00000762	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0189167_1	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0189167_1	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0189167_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0189167_2	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_5	phrog_757	47.9	0.0000000000002	DNA methyltransferase	other
UniRef90	UHGV-0189167_5	UniRef90_A0A7J2R6L5	70.5	0.00000000000000529	DNA cytosine methyltransferase (Fragment)	N/A
eggNOG-mapper	UHGV-0189167_5	748224.HMPREF9436_03069	100.0	7.74e-26	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0189167_5	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
PHROG	UHGV-0189167_6	phrog_757	116.6	1.7e-34	DNA methyltransferase	other
UniRef90	UHGV-0189167_6	UniRef90_UPI001C00B13F	322.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-0189167_6	748224.HMPREF9436_03069	223.0	0	DNA (cytosine-5-)-methyltransferase activity	N/A
COG	UHGV-0189167_6	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
KOfam	UHGV-0189167_9	K01160	59.3	1.1e-16	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0189167_9	phrog_34	59.9	5.2e-17	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0189167_9	UniRef90_A0A6N7TND6	214.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0189167_9	875454.BAEW01000002_gene491	135.0	1.18e-39	Endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0189167_9	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0189167_9	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0189167_9	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_10	phrog_2715	148.1	2.24208e-44	N/A	unknown function
eggNOG-mapper	UHGV-0189167_10	718252.FP2_16370	149.0	1.03696e-43	N/A	N/A
structural_annotation	UHGV-0189167_10	PF18406	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189167_11	UniRef90_A0A6N7TNN9	68.9	0.00000000000897	N/A	N/A
structural_annotation	UHGV-0189167_11	PF07374	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189167_12	UniRef90_UPI0018CC2891	111.0	1.9e-28	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0189167_12	1235790.C805_00037	107.0	1.67e-27	N/A	N/A
structural_annotation	UHGV-0189167_12	PF04218	N/A	N/A	N/A	N/A
KOfam	UHGV-0189167_13	K06909	142.0	5.5001e-42	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0189167_13	phrog_10250	173.7	0	N/A	unknown function
UniRef90	UHGV-0189167_13	UniRef90_A0A844D8I4	847.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0189167_13	411490.ANACAC_00783	489.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0189167_13	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-0189167_13	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-0189167_13	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0189167_13	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0189167_13	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_14	phrog_64	120.2	7.5e-36	portal protein	head and packaging
UniRef90	UHGV-0189167_14	UniRef90_A0A6N7TNT3	888.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0189167_14	1042156.CXIVA_01850	78.6	0.00000000000103	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0189167_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0189167_14	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
Pfam	UHGV-0189167_15	PF04448	N/A	N/A	N/A	DUF551
PHROG	UHGV-0189167_16	phrog_2468	80.2	3.5e-23	head morphogenesis	head and packaging
UniRef90	UHGV-0189167_16	UniRef90_A0A6N7TLR7	616.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0189167_16	1504822.CCNO01000013_gene286	115.0	3.08e-25	cell adhesion	N/A
Pfam	UHGV-0189167_16	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0189167_16	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189167_16	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_19	phrog_5	41.2	0.000000000036	tail completion or Neck1 protein	connector
UniRef90	UHGV-0189167_19	UniRef90_A0A6N7TNP6	266.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0189167_19	268407.PWYN_03010	70.9	0.000000000000159	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0189167_19	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0189167_19	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189167_21	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_22	phrog_544	118.1	7.8e-35	major head protein	head and packaging
UniRef90	UHGV-0189167_22	UniRef90_A0A1C6B5R0	328.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0189167_22	476272.RUMHYD_01776	291.0	0	N/A	N/A
structural_annotation	UHGV-0189167_22	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_24	phrog_17977	42.2	0.000000000012	N/A	unknown function
UniRef90	UHGV-0189167_24	UniRef90_A0A844DHJ8	121.0	2.83e-33	Phage head closure protein	N/A
structural_annotation	UHGV-0189167_24	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189167_25	PF13554	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_26	phrog_885	70.4	2.1e-20	major tail protein	tail
eggNOG-mapper	UHGV-0189167_26	1111121.HMPREF1247_0789	172.0	0	N/A	N/A
structural_annotation	UHGV-0189167_26	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_29	phrog_28775	106.6	1.9e-31	tail length tape measure protein	tail
UniRef90	UHGV-0189167_29	UniRef90_A0A6N7TLD3	1111.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0189167_29	1492737.FEM08_12070	145.0	1.05e-33	tape measure	N/A
Pfam	UHGV-0189167_29	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0189167_29	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0189167_29	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0189167_29	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189167_30	UniRef90_A0A417QGC1	114.0	2.42e-27	MtfA protein	N/A
eggNOG-mapper	UHGV-0189167_30	411490.ANACAC_00709	102.0	2.09e-23	phage tail	N/A
COG	UHGV-0189167_30	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0189167_30	PF05709,PF02408,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_31	phrog_3558	205.3	0	tail protein	tail
UniRef90	UHGV-0189167_31	UniRef90_R9C6X0	63.2	0.000000775	Phage minor structural protein	N/A
eggNOG-mapper	UHGV-0189167_31	610130.Closa_0754	67.8	0.00000000519	N/A	N/A
Pfam	UHGV-0189167_31	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
COG	UHGV-0189167_31	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0189167_31	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0189167_32	748224.HMPREF9436_01407	252.0	0	COG NOG18825 non supervised orthologous group	N/A
PHROG	UHGV-0189167_34	phrog_1382	50.4	0.000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-0189167_34	33035.JPJF01000043_gene998	46.6	0.00000201	N/A	N/A
KOfam	UHGV-0189167_35	K07273	163.2	0	acm; lysozyme	N/A
PHROG	UHGV-0189167_35	phrog_291	116.8	2.1e-34	endolysin	lysis
UniRef90	UHGV-0189167_35	UniRef90_A0A564U0D3	412.0	0	Autolytic lysozyme	N/A
eggNOG-mapper	UHGV-0189167_35	718252.FP2_04890	256.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0189167_35	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0189167_35	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0189167_35	PF01183,NF007404,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_37	phrog_15303	114.2	5.9e-34	N/A	unknown function
Pfam	UHGV-0189167_37	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
eggNOG-mapper	UHGV-0189167_38	411483.FAEPRAA2165_00757	173.0	0	N/A	N/A
structural_annotation	UHGV-0189167_38	PF10651	N/A	N/A	N/A	N/A
COG	UHGV-0189167_43	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0189167_43	PF13560,NF040522	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_45	phrog_3754	98.4	6.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-0189167_45	1235790.C805_00054	110.0	1.1e-29	N/A	N/A
PHROG	UHGV-0189167_46	phrog_21718	89.1	5.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0189167_46	397290.C810_05210	77.8	6.29e-16	N/A	N/A
PHROG	UHGV-0189167_47	phrog_22984	70.3	2.5e-20	N/A	unknown function
PHROG	UHGV-0189167_48	phrog_16490	197.8	0	N/A	unknown function
eggNOG-mapper	UHGV-0189167_48	397290.C810_01328	126.0	1.48e-31	N/A	N/A
PHROG	UHGV-0189167_50	phrog_20016	204.8	0	N/A	unknown function
UniRef90	UHGV-0189167_50	UniRef90_A0A285PT46	214.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0189167_50	1226322.HMPREF1545_00077	184.0	0	N/A	N/A
structural_annotation	UHGV-0189167_50	PF18573,NF033147	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0189167_51	PF12510	N/A	N/A	N/A	N/A
KOfam	UHGV-0189167_53	K14059	141.9	7.10038e-42	int; integrase	N/A
PHROG	UHGV-0189167_53	phrog_1	165.9	0	integrase	integration and excision
UniRef90	UHGV-0189167_53	UniRef90_A0A6N7TNQ4	743.0	0	Tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0189167_53	411471.SUBVAR_05137	262.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0189167_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0189167_53	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0189167_53	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0189167_54	K15773	41.1	0.000000000034	hipB; HTH-type transcriptional regulator / antitoxin HipB	N/A
UniRef90	UHGV-0189167_54	UniRef90_A0A6N7TLT0	370.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0189167_54	266265.Bxe_A3948	50.4	0.00000493	Helix-turn-helix domain	N/A
Pfam	UHGV-0189167_54	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0189167_54	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0189167_54	PF13560,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-0189167_57	UniRef90_A0A1W2B3I7	95.1	2.86e-20	Ig-like domain (Group 2)	N/A
eggNOG-mapper	UHGV-0189167_57	321955.AAGP01000017_gene2211	55.1	0.000000586	N/A	N/A
structural_annotation	UHGV-0189167_57	PF16900,NF040991	N/A	N/A	N/A	N/A
KOfam	UHGV-0189167_60	K22300	49.2	0.00000000000011	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0189167_60	phrog_2967	48.9	0.000000000000096	transcriptional regulator	transcription regulation
UniRef90	UHGV-0189167_60	UniRef90_A0A844DFR0	170.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0189167_60	748224.HMPREF9436_01444	139.0	1.54e-40	N/A	N/A
Pfam	UHGV-0189167_60	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0189167_60	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0189167_60	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0189167_63	K07741	141.2	1.49995e-41	antB; anti-repressor protein	N/A
PHROG	UHGV-0189167_63	phrog_63	122.8	3.1e-36	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0189167_63	UniRef90_A0A6N7TLD1	325.0	0	Phage antirepressor Ant	N/A
eggNOG-mapper	UHGV-0189167_63	1051631.F8HGQ0_9CAUD	205.0	0	DNA binding	N/A
Pfam	UHGV-0189167_63	PF08346	N/A	N/A	AntA/AntB antirepressor	AntA
Pfam	UHGV-0189167_63	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
structural_annotation	UHGV-0189167_63	PF03374,PF08346,TIGR02681,COG3561,COG3645	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0189167_64	760568.Desku_0919	95.9	1.02e-21	N/A	N/A
structural_annotation	UHGV-0189167_64	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0189167_65	1121865.OMW_01950	69.7	0.0000000000000107	N/A	N/A
structural_annotation	UHGV-0189167_65	PF17516,NF007197	N/A	N/A	N/A	N/A
PHROG	UHGV-0189167_68	phrog_4433	149.3	2.66247e-44	N/A	unknown function
UniRef90	UHGV-0189167_68	UniRef90_A0A6M5C839	99.8	3.94e-23	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0189167_68	33035.JPJF01000122_gene2458	104.0	1.38e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0189167_68	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0189167_68	NF000318	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0189167	Yes	39,436	54	93	1
UHGV-0202030	No	32,751	55	78	1