vOTU vOTU-067903

vOTU: vOTU-067903

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-067903
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00346 → vGENUS-00244 → vSUBGEN-39361 → vOTU-067903
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0006264
Biosample ID	N/A
Genome length (bp)	44,045 bps
CheckV completeness	99.90% (High-quality)
CDS count	56
CDS density	92.85%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella	Total connections	48	Host agreement	89.58
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Angelakisella → Angelakisella sp900547385	Total connections	11	Host agreement	90.91

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0006264_2	767817.Desgi_0243	383.0	0	N/A	N/A
KOfam	UHGV-0006264_3	K03309	410.5	0	TC.DAACS; dicarboxylate/amino acid:cation (Na+ or H+) symporter, DAACS family	N/A
PHROG	UHGV-0006264_3	phrog_16930	236.5	0	N/A	unknown function
UniRef90	UHGV-0006264_3	UniRef90_A0A8J7RPB5	707.0	0	Dicarboxylate/amino acid:cation symporter	N/A
eggNOG-mapper	UHGV-0006264_3	1280692.AUJL01000014_gene3237	469.0	0	Belongs to the dicarboxylate amino acid cation symporter (DAACS) (TC 2.A.23) family	N/A
Pfam	UHGV-0006264_3	PF00375	N/A	N/A	Sodium:dicarboxylate symporter family	SDF
COG	UHGV-0006264_3	COG1301	N/A	N/A	Na+/H+-dicarboxylate symporter	N/A
structural_annotation	UHGV-0006264_3	PF00375,MF_02063,NF008440,COG1301	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_5	phrog_14770	107.0	3.6e-32	N/A	unknown function
UniRef90	UHGV-0006264_5	UniRef90_A0A8D9UHE1	1916.0	0	PolyVal ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0006264_5	445971.ANASTE_00728	279.0	0	Transcription regulator that activates transcription by stimulating RNA polymerase (RNAP) recycling in case of stress conditions such as supercoiled DNA or high salt concentrations. Probably acts by releasing the RNAP, when it is trapped or immobilized on tightly supercoiled DNA. Does not activate transcription on linear DNA. Probably not involved in DNA repair	N/A
Pfam	UHGV-0006264_5	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
Pfam	UHGV-0006264_5	PF18760	N/A	N/A	ADP-Ribosyltransferase in polyvalent proteins	ART-PolyVal
Pfam	UHGV-0006264_5	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
COG	UHGV-0006264_5	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0006264_6	MF_01304	N/A	N/A	N/A	N/A
KOfam	UHGV-0006264_7	K01448	58.9	7.3e-17	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0006264_7	phrog_435	65.3	1.3e-18	endolysin	lysis
UniRef90	UHGV-0006264_7	UniRef90_A0A2V2GRI9	431.0	0	MurNAc-LAA domain-containing protein	N/A
eggNOG-mapper	UHGV-0006264_7	994573.T472_0210960	97.1	8.32e-22	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-0006264_7	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-0006264_7	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0006264_7	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_9	phrog_1863	71.7	6e-21	N/A	unknown function
eggNOG-mapper	UHGV-0006264_9	718252.FP2_04900	87.8	9.27e-22	N/A	N/A
KOfam	UHGV-0006264_10	K06871	205.9	0	N/A	N/A
PHROG	UHGV-0006264_10	phrog_1802	166.9	0	radical SAM domain-containing protein	other
UniRef90	UHGV-0006264_10	UniRef90_A0A174B214	418.0	0	Anaerobic sulfatase-maturase	N/A
eggNOG-mapper	UHGV-0006264_10	457412.RSAG_01114	420.0	0	4Fe-4S single cluster domain	N/A
Pfam	UHGV-0006264_10	PF04055	N/A	N/A	Radical SAM superfamily	Radical_SAM
NCBIFam	UHGV-0006264_10	TIGR04115.1	N/A	N/A	radical SAM peptide maturase, CXXX-repeat target family	N/A
COG	UHGV-0006264_10	COG0641	N/A	N/A	Sulfatase maturation enzyme AslB, radical SAM superfamily	N/A
structural_annotation	UHGV-0006264_10	PF00962,MF_00660,TIGR04115,COG0641	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006264_11	PF13801,TIGR04116,COG5420	N/A	N/A	N/A	N/A
KOfam	UHGV-0006264_14	K19719	244.9	0	COL2A; collagen type II alpha	N/A
PHROG	UHGV-0006264_14	phrog_819	148.7	0	tail protein	tail
UniRef90	UHGV-0006264_14	UniRef90_A0A8D9PE13	654.0	0	Virion structural protein	N/A
Pfam	UHGV-0006264_14	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-0006264_14	COG4675	N/A	N/A	Phage tail collar domain	N/A
PHROG	UHGV-0006264_15	phrog_3287	128.1	5.7e-38	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0006264_15	665956.HMPREF1032_03917	478.0	0	N/A	N/A
structural_annotation	UHGV-0006264_15	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_18	phrog_1357	246.5	0	major head protein	head and packaging
UniRef90	UHGV-0006264_18	UniRef90_A0A8D9UHB3	573.0	0	Major capsid protein	N/A
eggNOG-mapper	UHGV-0006264_18	696281.Desru_1092	290.0	0	N/A	N/A
Pfam	UHGV-0006264_18	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-0006264_18	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0006264_18	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0006264_19	UniRef90_A0A8D9UHB9	317.0	0	Non-structural protein 5	N/A
UniRef90	UHGV-0006264_20	UniRef90_A0A8D9UHD6	125.0	9.92e-37	Ogr/Delta-like zinc finger	N/A
structural_annotation	UHGV-0006264_20	PF20020	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_21	phrog_156	182.9	0	portal protein	head and packaging
UniRef90	UHGV-0006264_21	UniRef90_A0A8D9UHD1	967.0	0	Portal protein	N/A
eggNOG-mapper	UHGV-0006264_21	1121091.AUMP01000003_gene2583	372.0	0	N/A	N/A
structural_annotation	UHGV-0006264_21	PF16510,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0006264_23	K06909	153.5	1.4013e-45	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0006264_23	phrog_979	159.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-0006264_23	UniRef90_A0A8D9UH35	783.0	0	Large subunit terminase	N/A
eggNOG-mapper	UHGV-0006264_23	1232449.BAHV02000016_gene1824	468.0	0	N/A	N/A
Pfam	UHGV-0006264_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0006264_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0006264_23	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0006264_24	UniRef90_A0A8D9UHF6	157.0	0	N/A	N/A
eggNOG-mapper	UHGV-0006264_24	1054213.HMPREF9946_03131	59.7	0.000000000338	N/A	N/A
Pfam	UHGV-0006264_24	PF18932	N/A	N/A	N/A	DUF5681
PHROG	UHGV-0006264_25	phrog_7339	83.2	2.9e-24	DNA repair exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006264_25	UniRef90_A0A2V2GLL9	471.0	0	Metallophos_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0006264_25	1150474.JQJI01000006_gene784	90.9	4.32e-19	metallophosphoesterase	N/A
Pfam	UHGV-0006264_25	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0006264_25	COG1408	N/A	N/A	Predicted phosphohydrolase, MPP superfamily	N/A
structural_annotation	UHGV-0006264_25	PF12850,MF_00325,NF003118,COG1311	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_27	phrog_36	43.1	0.0000000000082	transcriptional regulator	transcription regulation
UniRef90	UHGV-0006264_27	UniRef90_UPI001D0837DD	117.0	6.21e-31	N/A	N/A
eggNOG-mapper	UHGV-0006264_27	428125.CLOLEP_01806	89.7	9.58e-21	N/A	N/A
structural_annotation	UHGV-0006264_27	PF07374,TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0006264_28	657322.FPR_23450	151.0	0	N/A	N/A
PHROG	UHGV-0006264_33	phrog_3878	41.1	0.000000000032	N/A	unknown function
structural_annotation	UHGV-0006264_33	PF18895	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006264_35	TIGR04381	N/A	N/A	N/A	N/A
KOfam	UHGV-0006264_37	K01160	64.8	2.4e-18	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0006264_37	phrog_34	71.0	2e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006264_37	UniRef90_A0A498CNH4	147.0	9.94922e-44	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0006264_37	477974.Daud_0813	51.6	0.00000262	N/A	N/A
Pfam	UHGV-0006264_37	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
structural_annotation	UHGV-0006264_37	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0006264_38	K00390	94.8	9.9e-28	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0006264_38	phrog_424	129.3	2.5e-38	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0006264_38	UniRef90_UPI001D087498	373.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-0006264_38	1408437.JNJN01000032_gene2312	345.0	0	Phosphoadenosine phosphosulfate reductase	N/A
PADLOC	UHGV-0006264_38	BrxP_00001	68.8	7e-20	BrxP	BREX
Pfam	UHGV-0006264_38	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0006264_38	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0006264_38	PF01507,MF_00063,NF010369,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_39	phrog_9804	168.5	0	N/A	unknown function
UniRef90	UHGV-0006264_39	UniRef90_UPI001E312ACC	355.0	0	replicative helicase loader/inhibitor	N/A
eggNOG-mapper	UHGV-0006264_39	1121344.JHZO01000003_gene981	182.0	0	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0006264_39	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0006264_39	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_40	phrog_9474	93.5	2.8e-27	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006264_40	UniRef90_A0A8B3R1H0	106.0	6.29e-24	Phage replication protein	N/A
eggNOG-mapper	UHGV-0006264_40	411490.ANACAC_00800	109.0	5.15e-26	N/A	N/A
structural_annotation	UHGV-0006264_40	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0006264_41	K03111	128.5	8.1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0006264_41	phrog_44	132.5	3.1e-39	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006264_41	UniRef90_UPI001E2A5A6F	231.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0006264_41	1235835.C814_01372	125.0	3.26e-35	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0006264_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0006264_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0006264_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0006264_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0006264_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_42	phrog_7566	52.0	0.000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0006264_42	693746.OBV_24070	70.1	0.0000000000000483	N/A	N/A
PHROG	UHGV-0006264_43	phrog_72	64.9	1.2e-18	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0006264_43	UniRef90_UPI001F3F3E5C	145.0	3.41006e-41	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0006264_43	445972.ANACOL_01825	129.0	1.98e-35	N/A	N/A
structural_annotation	UHGV-0006264_43	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_44	phrog_14970	192.1	0	N/A	unknown function
UniRef90	UHGV-0006264_44	UniRef90_UPI00123F00F5	175.0	0	Rad52/Rad22 family DNA repair protein	N/A
eggNOG-mapper	UHGV-0006264_44	428127.EUBDOL_01248	153.0	7.70714e-44	double-strand break repair protein	N/A
Pfam	UHGV-0006264_44	PF04098	N/A	N/A	Rad52/22 family double-strand break repair protein	Rad52_Rad22
COG	UHGV-0006264_44	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0006264_44	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0006264_46	phrog_4433	275.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0006264_46	767434.Fraau_1460	112.0	9.13e-26	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0006264_46	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0006264_46	NF007410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006264_49	NF041588	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0006264_50	PF12728,NF040990	N/A	N/A	N/A	N/A
UniRef90	UHGV-0006264_52	UniRef90_UPI0018995761	93.6	7.28e-24	helix-turn-helix transcriptional regulator	N/A
structural_annotation	UHGV-0006264_52	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
COG	UHGV-0006264_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0006264_56	K14059	211.5	0	int; integrase	N/A
PHROG	UHGV-0006264_56	phrog_1	185.7	0	integrase	integration and excision
UniRef90	UHGV-0006264_56	UniRef90_A0A8D9PE11	362.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0006264_56	693746.OBV_01970	161.0	1.69557e-43	Phage integrase family	N/A
Pfam	UHGV-0006264_56	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0006264_56	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0006264_56	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0006264	Yes	44,045	53	100	1
UHGV-0020201	No	24,893	54	64	1
UHGV-0016656	No	24,581	54	63	1