vOTU vOTU-067962

vOTU: vOTU-067962

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-067962
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00781 → vGENUS-00653 → vSUBGEN-00466 → vOTU-067962
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0034512
Biosample ID	SAMEA4969167
Genome length (bp)	44,310 bps
CheckV completeness	99.90% (High-quality)
CDS count	57
CDS density	90.69%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	35	Host agreement	85.71
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	19	Host agreement	94.74

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0034512_3	K06200	589.7	0	cstA; carbon starvation protein	N/A
UniRef90	UHGV-0034512_3	UniRef90_E2NP64	1065.0	0	Carbon starvation protein CstA	N/A
eggNOG-mapper	UHGV-0034512_3	1504823.CCMM01000008_gene982	962.0	0	5TM C-terminal transporter carbon starvation CstA	N/A
Pfam	UHGV-0034512_3	PF02554	N/A	N/A	Carbon starvation protein CstA	CstA
Pfam	UHGV-0034512_3	PF13722	N/A	N/A	5TM C-terminal transporter carbon starvation CstA	CstA_5TM
COG	UHGV-0034512_3	COG1966	N/A	N/A	Carbon starvation protein CstA (peptide/pyruvate transporter)	N/A
KOfam	UHGV-0034512_4	K14059	103.9	2.4e-30	int; integrase	N/A
PHROG	UHGV-0034512_4	phrog_1	132.2	4.5e-39	integrase	integration and excision
UniRef90	UHGV-0034512_4	UniRef90_UPI001EE781EB	530.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0034512_4	1504823.CCMM01000008_gene1083	455.0	0	DNA integration	N/A
Pfam	UHGV-0034512_4	PF14657	N/A	N/A	Arm DNA-binding domain	Arm-DNA-bind_4
Pfam	UHGV-0034512_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0034512_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0034512_4	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-0034512_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
UniRef90	UHGV-0034512_7	UniRef90_A0A417IKZ6	90.9	3.17e-22	DNA-binding protein	N/A
structural_annotation	UHGV-0034512_7	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_8	phrog_69	55.0	0.0000000000000015	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034512_8	UniRef90_A0A645E2H1	177.0	0	PDDEXK_1 domain-containing protein	N/A
Pfam	UHGV-0034512_8	PF12705	N/A	N/A	PD-(D/E)XK nuclease superfamily	PDDEXK_1
COG	UHGV-0034512_8	COG2887	N/A	N/A	RecB family exonuclease	N/A
structural_annotation	UHGV-0034512_8	PF12684,TIGR01896,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_9	phrog_124	136.5	1.90001e-40	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034512_9	UniRef90_A0A7X2IW81	200.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0034512_9	1227360.C176_12573	195.0	0	AAA domain	N/A
Pfam	UHGV-0034512_9	PF13479	N/A	N/A	AAA domain	AAA_24
NCBIFam	UHGV-0034512_9	TIGR01618.1	N/A	N/A	phage nucleotide-binding protein	N/A
structural_annotation	UHGV-0034512_9	PF13479,MF_00350,TIGR01618,COG1066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034512_10	1539298.JO41_12690	57.8	0.0000000474	N/A	N/A
Pfam	UHGV-0034512_10	PF05037	N/A	N/A	N/A	DUF669
structural_annotation	UHGV-0034512_10	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-0034512_11	K19789	255.9	0	radD; DNA repair protein RadD	N/A
PHROG	UHGV-0034512_11	phrog_16	220.9	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034512_11	UniRef90_A0A374HMN2	330.0	0	ATP-dependent helicase	N/A
eggNOG-mapper	UHGV-0034512_11	1410670.JHXF01000015_gene2270	302.0	0	helicase	N/A
PADLOC	UHGV-0034512_11	mREase_IV_00005	101.6	7.3e-30	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0034512_11	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0034512_11	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0034512_11	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0034512_11	PF04851,PF00271,MF_01489,TIGR04095,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_12	phrog_93	44.7	0.0000000000015	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034512_12	UniRef90_A0A3E3AEG4	94.7	5.58e-23	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0034512_12	90410.Q9XJD1_9CAUD	53.9	0.0000000876	hydrolase activity, acting on ester bonds	N/A
Pfam	UHGV-0034512_12	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
PHROG	UHGV-0034512_13	phrog_236	101.2	1.9e-29	nucleotide kinase	other
UniRef90	UHGV-0034512_13	UniRef90_A0A8D9PGN7	134.0	8.49e-39	Nucelotide kinase	N/A
eggNOG-mapper	UHGV-0034512_13	1123263.AUKY01000015_gene1590	89.7	1.2e-22	N/A	N/A
Pfam	UHGV-0034512_13	PF11753	N/A	N/A	N/A	DUF3310
structural_annotation	UHGV-0034512_13	PF11753	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_15	phrog_6721	272.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0034512_15	428125.CLOLEP_01387	246.0	0	N/A	N/A
structural_annotation	UHGV-0034512_15	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_16	phrog_4856	70.0	3.6e-20	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-0034512_16	UniRef90_E2NR83	164.0	0	MazG domain-containing protein	N/A
Pfam	UHGV-0034512_16	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-0034512_16	MF_01019,NF002747,COG0140	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_17	phrog_4019	114.5	4.2e-34	N/A	unknown function
UniRef90	UHGV-0034512_17	UniRef90_F9PY75	92.0	7.93e-22	Conserved domain protein	N/A
PHROG	UHGV-0034512_18	phrog_3878	46.6	0.00000000000058	N/A	unknown function
structural_annotation	UHGV-0034512_19	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034512_20	1336234.JAGN01000004_gene538	49.7	0.00000614	N/A	N/A
PHROG	UHGV-0034512_21	phrog_22292	79.8	2.7e-23	N/A	unknown function
eggNOG-mapper	UHGV-0034512_21	1232446.BAIE02000002_gene811	62.4	0.000000000462	N/A	N/A
KOfam	UHGV-0034512_25	K07171	83.2	4.7e-24	mazF, ndoA, chpA; mRNA interferase MazF [EC:3.1.-.-]	N/A
PHROG	UHGV-0034512_25	phrog_1936	124.3	7.9e-37	MazF-like growth inhibitor	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0034512_25	UniRef90_A0A1C5MWG4	142.0	2.61999e-40	mRNA interferase MazF4	N/A
eggNOG-mapper	UHGV-0034512_25	411461.DORFOR_01157	113.0	7.12e-29	N/A	N/A
Pfam	UHGV-0034512_25	PF02452	N/A	N/A	PemK-like, MazF-like toxin of type II toxin-antitoxin system	PemK_toxin
COG	UHGV-0034512_25	COG2337	N/A	N/A	mRNA-degrading endonuclease MazF, toxin component of the MazEF toxin-antitoxin module	N/A
structural_annotation	UHGV-0034512_25	PF02452,NF007386,COG2337	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_26	phrog_799	87.0	2.1e-25	DNA methyltransferase	other
UniRef90	UHGV-0034512_26	UniRef90_UPI00164E7D72	261.0	0	sugar-phospahte nucleotidyltransferase	N/A
eggNOG-mapper	UHGV-0034512_26	1235797.C816_04032	182.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
Pfam	UHGV-0034512_26	PF13651	N/A	N/A	Adenine-specific methyltransferase EcoRI	EcoRI_methylase
COG	UHGV-0034512_26	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0034512_26	PF13651,MF_00607,NF000077,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_27	phrog_111	170.1	0	DNA methyltransferase	other
UniRef90	UHGV-0034512_27	UniRef90_UPI000CA13492	218.0	0	phage N-6-adenine-methyltransferase	N/A
eggNOG-mapper	UHGV-0034512_27	1567011.A0A0A7RUD1_9VIRU	208.0	0	DNA N-6-adenine-methyltransferase (Dam)	N/A
PADLOC	UHGV-0034512_27	oMTase_00015	224.3	0	orphan methyltransferase	RM
Pfam	UHGV-0034512_27	PF05869	N/A	N/A	DNA N-6-adenine-methyltransferase (Dam)	Dam
NCBIFam	UHGV-0034512_27	TIGR01712.1	N/A	N/A	phage N-6-adenine-methyltransferase	N/A
structural_annotation	UHGV-0034512_27	PF05869,MF_03187,TIGR01712,COG2263	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034512_31	PF15959	N/A	N/A	N/A	N/A
KOfam	UHGV-0034512_33	K02316	87.6	1.5e-25	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0034512_33	phrog_864	210.7	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034512_33	UniRef90_UPI001C2539AF	520.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034512_33	1219626.HMPREF1639_07360	112.0	7.31e-23	D5 N terminal like	N/A
Pfam	UHGV-0034512_33	PF13155	N/A	N/A	Toprim-like	Toprim_2
Pfam	UHGV-0034512_33	PF19263	N/A	N/A	N/A	DUF5906
NCBIFam	UHGV-0034512_33	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-0034512_33	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-0034512_33	PF04735,MF_00974,MF_04000,NF005477,COG3378,COG0358	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_34	phrog_606	43.3	0.0000000000049	terminase small subunit	head and packaging
eggNOG-mapper	UHGV-0034512_34	931276.Cspa_c57180	51.6	0.00000411	DNA-packaging protein gp3	N/A
Pfam	UHGV-0034512_34	PF16677	N/A	N/A	DNA-packaging protein gp3	GP3_package
UniRef90	UHGV-0034512_35	UniRef90_A0A1C6GC44	157.0	1.60028e-42	Glutamine amidotransferases class-II	N/A
eggNOG-mapper	UHGV-0034512_35	1401067.HMPREF0872_03875	109.0	2.4e-25	N/A	N/A
structural_annotation	UHGV-0034512_35	PF13230,MF_01931,TIGR01134,COG0121	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_36	phrog_16683	110.6	1.1e-32	N/A	unknown function
UniRef90	UHGV-0034512_36	UniRef90_UPI001C125BE3	124.0	7.36e-28	amidoligase family protein	N/A
eggNOG-mapper	UHGV-0034512_36	1203606.HMPREF1526_01758	122.0	6.25e-28	Putative amidoligase enzyme	N/A
structural_annotation	UHGV-0034512_36	PF12224,MF_02111,NF010044,COG2170	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034512_37	UniRef90_UPI0018AB0909	50.1	0.00000411	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-0034512_37	PF12844,TIGR02612,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0034512_38	K14060	119.7	3.1e-35	pinR; putative DNA-invertase from lambdoid prophage Rac	N/A
PHROG	UHGV-0034512_38	phrog_125	149.6	1.82169e-44	DNA invertase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0034512_38	UniRef90_A0A3E3AEZ4	206.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0034512_38	641107.CDLVIII_2031	160.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0034512_38	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
COG	UHGV-0034512_38	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0034512_38	PF00239,PF02796,NF009949,COG1961	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_39	phrog_38	210.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0034512_39	UniRef90_A0A318EQM2	461.0	0	Putative phage terminase large subunit-like protein	N/A
eggNOG-mapper	UHGV-0034512_39	1123263.AUKY01000015_gene1608	503.0	0	chromosome segregation	N/A
COG	UHGV-0034512_39	COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034512_39	PF17289,PF02562,MF_04147,NF033889,COG5362,COG5410	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0034512_40	COG4416	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_41	phrog_64	195.0	0	portal protein	head and packaging
UniRef90	UHGV-0034512_41	UniRef90_A0A3E3AE79	425.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0034512_41	1232453.BAIF02000058_gene1625	245.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0034512_41	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0034512_41	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_43	phrog_544	42.2	0.0000000000015	major head protein	head and packaging
eggNOG-mapper	UHGV-0034512_43	428127.EUBDOL_01555	283.0	0	N/A	N/A
structural_annotation	UHGV-0034512_43	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0034512_45	UniRef90_A0A7C7ERG0	105.0	3.64e-27	DNA-packaging protein	N/A
eggNOG-mapper	UHGV-0034512_45	1298920.KI911353_gene2658	48.5	0.00000866	N/A	N/A
structural_annotation	UHGV-0034512_45	TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034512_46	1121866.AUGK01000003_gene1432	63.2	0.0000000000418	N/A	N/A
UniRef90	UHGV-0034512_47	UniRef90_UPI001BBD4500	118.0	6.75e-31	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0034512_47	397290.C810_01411	70.1	0.000000000000905	N/A	N/A
structural_annotation	UHGV-0034512_47	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034512_48	1121333.JMLH01000047_gene1014	67.0	0.00000000000282	N/A	N/A
structural_annotation	UHGV-0034512_48	PF06141,TIGR02367,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_49	phrog_158	40.5	0.000000000045	major tail protein	tail
eggNOG-mapper	UHGV-0034512_49	469596.HMPREF9488_01310	225.0	0	N/A	N/A
structural_annotation	UHGV-0034512_49	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
Pfam	UHGV-0034512_50	PF16478	N/A	N/A	N/A	DUF5055
structural_annotation	UHGV-0034512_50	PF16478	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0034512_51	1121333.JMLH01000047_gene1011	101.0	3.24e-26	N/A	N/A
KOfam	UHGV-0034512_52	K06240	40.9	0.000000000000021	LAMA3_5; laminin, alpha 3/5	N/A
PHROG	UHGV-0034512_52	phrog_1535	253.5	0	tail length tape measure protein	tail
UniRef90	UHGV-0034512_52	UniRef90_A8RD17	238.0	0	Cation diffusion facilitator family transporter	N/A
eggNOG-mapper	UHGV-0034512_52	428127.EUBDOL_01563	238.0	0	homoserine transmembrane transporter activity	N/A
COG	UHGV-0034512_52	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
PHROG	UHGV-0034512_53	phrog_1194	93.2	1.9e-27	N/A	unknown function
UniRef90	UHGV-0034512_53	UniRef90_G0IA27	82.4	6.13e-18	N/A	N/A
eggNOG-mapper	UHGV-0034512_53	1294142.CINTURNW_1701	103.0	6.93e-27	N/A	N/A
Pfam	UHGV-0034512_53	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0034512_53	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_54	phrog_6616	127.5	5.5e-38	tail protein	tail
eggNOG-mapper	UHGV-0034512_54	1121333.JMLH01000047_gene1007	382.0	0	N/A	N/A
structural_annotation	UHGV-0034512_54	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_55	phrog_30133	111.1	8.9e-33	virion structural protein	head and packaging
UniRef90	UHGV-0034512_55	UniRef90_A0A087BZT1	285.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034512_55	1504823.CCMM01000008_gene1029	309.0	0	N/A	N/A
structural_annotation	UHGV-0034512_55	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-0034512_56	phrog_18110	43.6	0.0000000000028	N/A	unknown function
eggNOG-mapper	UHGV-0034512_56	411465.PEPMIC_00746	70.1	0.0000000000696	Prophage endopeptidase tail	N/A
COG	UHGV-0034512_56	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0034512_57	phrog_372	226.5	0	tail protein	tail
UniRef90	UHGV-0034512_57	UniRef90_UPI0006C32325	807.0	0	N/A	N/A
eggNOG-mapper	UHGV-0034512_57	1211844.CBLM010000016_gene1479	192.0	0	N/A	N/A
Pfam	UHGV-0034512_57	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-0034512_57	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0034512	Yes	44,310	38	100	1