vOTU vOTU-068077

vOTU: vOTU-068077

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-068077
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01060 → vGENUS-02306 → vSUBGEN-27743 → vOTU-068077
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0018300
Biosample ID	N/A
Genome length (bp)	44,193 bps
CheckV completeness	99.90% (High-quality)
CDS count	60
CDS density	93.44%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	9	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0018300_1	1226322.HMPREF1545_00632	54.7	0.0000000529	N/A	N/A
PHROG	UHGV-0018300_3	phrog_1891	78.3	1.3e-27	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_3	UniRef90_UPI001D013072	123.0	9.69e-32	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0018300_3	1278971.AOGF01000059_gene160	57.8	0.000000135	HNH endonuclease	N/A
Pfam	UHGV-0018300_3	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0018300_3	PF13392	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0018300_4	1304866.K413DRAFT_4695	72.8	3.73e-16	N/A	N/A
structural_annotation	UHGV-0018300_4	NF010673	N/A	N/A	N/A	N/A
KOfam	UHGV-0018300_5	K00558	157.7	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0018300_5	phrog_363	241.8	0	DNA methyltransferase	other
UniRef90	UHGV-0018300_5	UniRef90_G4KRB8	339.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-0018300_5	693746.OBV_01900	339.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0018300_5	MTase_II_00058	121.2	7.9e-36	Type II methyltransferase	RM
Pfam	UHGV-0018300_5	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-0018300_5	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-0018300_5	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0018300_5	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_6	phrog_801	77.4	2.2e-22	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-0018300_6	UniRef90_A0A7G6E7Z0	152.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0018300_6	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-0018300_6	PF18909	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_8	phrog_244	73.0	5e-21	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_8	UniRef90_A0A841R0Q1	125.0	3.23e-35	Holliday junction resolvase	N/A
eggNOG-mapper	UHGV-0018300_8	1200557.JHWV01000001_gene280	106.0	3.92e-28	N/A	N/A
structural_annotation	UHGV-0018300_8	PF01870,MF_01490,NF040854,COG1591	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_10	phrog_5810	68.6	1e-19	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_10	UniRef90_UPI00164BB1D1	163.0	1.4013e-45	transcriptional regulator	N/A
eggNOG-mapper	UHGV-0018300_10	411490.ANACAC_00800	145.0	1.42e-39	N/A	N/A
structural_annotation	UHGV-0018300_10	PF10771,NF041413,COG0735	N/A	N/A	N/A	N/A
KOfam	UHGV-0018300_12	K03111	120.9	1.6e-35	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0018300_12	phrog_44	127.2	1.2e-37	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_12	UniRef90_A0A1Y3SFQ6	163.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0018300_12	1007096.BAGW01000007_gene1922	162.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0018300_12	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0018300_12	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0018300_12	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0018300_12	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0018300_12	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_13	phrog_7370	57.4	2.1e-16	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_13	UniRef90_A0A3D3Y4P7	115.0	2.86e-31	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-0018300_13	445972.ANACOL_01826	104.0	6.53e-28	HNH nucleases	N/A
PHROG	UHGV-0018300_14	phrog_59	125.1	2.8e-37	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_14	UniRef90_UPI001F2E8D32	122.0	5.84e-32	NUMOD4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0018300_14	357276.EL88_11520	110.0	5.68e-28	HNH endonuclease domain protein	N/A
PADLOC	UHGV-0018300_14	HEase_00016	80.5	4.7e-24	homing endonuclease	RM
Pfam	UHGV-0018300_14	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
structural_annotation	UHGV-0018300_14	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_15	phrog_72	56.9	2.5e-16	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_15	UniRef90_UPI001F3F3E5C	155.0	2.8026e-45	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0018300_15	1399942.U3PCT8_9CAUD	105.0	2.23e-26	N/A	N/A
structural_annotation	UHGV-0018300_15	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_16	phrog_7838	127.6	7.5e-38	exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0018300_16	UniRef90_A0A8D9UGW3	208.0	0	DNA repair protein RAD52-like protein	N/A
eggNOG-mapper	UHGV-0018300_16	742767.HMPREF9456_02052	164.0	0	N/A	N/A
structural_annotation	UHGV-0018300_16	PF04098,TIGR00607,COG4380	N/A	N/A	N/A	N/A
Pfam	UHGV-0018300_19	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0018300_22	PF21291,NF041951,COG1513	N/A	N/A	N/A	N/A
UniRef90	UHGV-0018300_24	UniRef90_A0A5B6P9C0	75.9	1.52e-16	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0018300_24	428125.CLOLEP_02737	70.1	0.00000000000000645	N/A	N/A
PHROG	UHGV-0018300_25	phrog_8	65.6	9.6e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0018300_25	UniRef90_A0A373XY93	97.8	1.25e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0018300_25	665956.HMPREF1032_02614	77.4	1.53e-16	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0018300_25	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0018300_25	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_28	phrog_14556	40.8	0.000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0018300_28	696281.Desru_2490	69.3	0.0000000000168	PFAM nuclease (SNase	N/A
COG	UHGV-0018300_28	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
structural_annotation	UHGV-0018300_29	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0018300_30	K14059	169.7	0	int; integrase	N/A
PHROG	UHGV-0018300_30	phrog_1	165.1	0	integrase	integration and excision
UniRef90	UHGV-0018300_30	UniRef90_A0A2Z4QB94	263.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0018300_30	1226322.HMPREF1545_00144	128.0	6.4e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0018300_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0018300_30	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0018300_30	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0018300_31	445972.ANACOL_01884	94.0	3.44e-23	N/A	N/A
Pfam	UHGV-0018300_34	PF04545	N/A	N/A	Sigma-70, region 4	Sigma70_r4
PHROG	UHGV-0018300_35	phrog_1129	67.9	9.8e-20	holin	lysis
UniRef90	UHGV-0018300_35	UniRef90_A0A316PMB0	116.0	2.61e-32	Enolase	N/A
eggNOG-mapper	UHGV-0018300_35	665956.HMPREF1032_03272	116.0	4.37e-33	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0018300_35	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0018300_35	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_36	phrog_4105	46.3	0.00000000000062	N/A	unknown function
KOfam	UHGV-0018300_37	K01447	93.5	2.9e-27	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0018300_37	phrog_1794	167.2	0	amidase	lysis
UniRef90	UHGV-0018300_37	UniRef90_A0A1Y4NYC1	198.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-0018300_37	658088.HMPREF0987_01102	192.0	0	Ami_2	N/A
Pfam	UHGV-0018300_37	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-0018300_37	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
Pfam	UHGV-0018300_37	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0018300_37	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0018300_37	PF01510,PF18342,MF_04111,NF008758,NF040670,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_40	phrog_22978	682.0	0	N/A	unknown function
eggNOG-mapper	UHGV-0018300_40	693746.OBV_01590	521.0	0	N/A	N/A
Pfam	UHGV-0018300_40	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0018300_40	PF18814	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease5	PBECR5
Pfam	UHGV-0018300_40	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
PHROG	UHGV-0018300_41	phrog_2649	52.6	0.00000000000001	endolysin	lysis
UniRef90	UHGV-0018300_41	UniRef90_A0A1V5RXD7	183.0	0	Putative peptidoglycan binding domain protein	N/A
eggNOG-mapper	UHGV-0018300_41	1410650.JHWL01000003_gene2815	125.0	4.29e-29	N/A	N/A
Pfam	UHGV-0018300_41	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
structural_annotation	UHGV-0018300_41	PF01471,TIGR02869,COG3409	N/A	N/A	N/A	N/A
KOfam	UHGV-0018300_42	K06909	132.5	3.4e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0018300_42	phrog_979	124.7	8.8e-39	terminase large subunit	head and packaging
UniRef90	UHGV-0018300_42	UniRef90_A0A3C0NMI6	602.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0018300_42	1410650.JHWL01000003_gene2834	556.0	0	N/A	N/A
Pfam	UHGV-0018300_42	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0018300_42	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0018300_42	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0018300_45	K22300	65.5	1e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0018300_45	phrog_7241	59.5	5.1e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0018300_45	UniRef90_A0A2V2FT63	68.9	0.0000000000000659	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0018300_45	1226322.HMPREF1545_02890	53.1	0.0000000792	Helix-turn-helix XRE-family like proteins	N/A
PADLOC	UHGV-0018300_45	retron_type_VI_hth_cluster2_1	40.8	0.000000000058	N/A	Retron
Pfam	UHGV-0018300_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-0018300_47	phrog_372	258.0	0	tail protein	tail
UniRef90	UHGV-0018300_47	UniRef90_A0A351TJT1	154.0	6.55e-36	Pilus assembly protein	N/A
eggNOG-mapper	UHGV-0018300_47	1235802.C823_05263	149.0	5.18e-35	N/A	N/A
Pfam	UHGV-0018300_47	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0018300_47	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0018300_47	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0018300_48	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_49	phrog_511	205.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0018300_49	1226322.HMPREF1545_00785	314.0	0	N/A	N/A
structural_annotation	UHGV-0018300_49	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_50	phrog_12105	118.1	4.3e-35	N/A	unknown function
eggNOG-mapper	UHGV-0018300_50	1226322.HMPREF1545_03850	82.8	1.1e-18	N/A	N/A
PHROG	UHGV-0018300_52	phrog_1357	205.8	0	major head protein	head and packaging
UniRef90	UHGV-0018300_52	UniRef90_A0A2V2CFL5	559.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0018300_52	1410650.JHWL01000003_gene2830	266.0	0	N/A	N/A
NCBIFam	UHGV-0018300_52	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0018300_52	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_53	phrog_13908	167.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0018300_53	1410650.JHWL01000003_gene2831	100.0	1.66e-21	N/A	N/A
KOfam	UHGV-0018300_54	K07584	47.5	0.00000000000034	N/A	N/A
PHROG	UHGV-0018300_54	phrog_4478	49.3	0.00000000000005	peptidase	other
UniRef90	UHGV-0018300_54	UniRef90_A0A357NCE2	60.8	0.000000000895	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0018300_54	706434.HMPREF9429_01254	55.5	0.000000016	Cysteine protease Prp	N/A
Pfam	UHGV-0018300_54	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0018300_54	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0018300_54	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0018300_55	phrog_156	307.2	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0018300_55	1410650.JHWL01000003_gene2833	558.0	0	N/A	N/A
structural_annotation	UHGV-0018300_55	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0018300_60	K05925	94.7	1.1e-27	METTL3; mRNA m6A methyltransferase catalytic subunit [EC:2.1.1.348]	N/A
PHROG	UHGV-0018300_60	phrog_359	257.8	0	DNA methyltransferase	other
UniRef90	UHGV-0018300_60	UniRef90_R6U7D4	344.0	0	Modification methylase MunI (Adenine-specificmethyltransferase MunI) (M.MunI)	N/A
eggNOG-mapper	UHGV-0018300_60	718252.FP2_12820	395.0	0	MT-A70	N/A
PADLOC	UHGV-0018300_60	MTase_II_00048	237.4	0	Type II methyltransferase	RM
Pfam	UHGV-0018300_60	PF05063	N/A	N/A	MT-A70	MT-A70
COG	UHGV-0018300_60	COG4725	N/A	N/A	N6-adenosine-specific RNA methylase IME4	N/A
structural_annotation	UHGV-0018300_60	PF05063,MF_01872,NF010253,COG4725	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0018300	Yes	44,193	59	100	1