vOTU vOTU-068139

vOTU: vOTU-068139

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-068139
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00176 → vSUBGEN-40798 → vOTU-068139
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1473483
Biosample ID	SAMEA2737741
Genome length (bp)	40,913 bps
CheckV completeness	99.47% (High-quality)
CDS count	79
CDS density	93.69%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	155	Host agreement	95.48
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	2	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.47)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1473483_1	1095769.CAHF01000005_gene1446	62.0	0.00000000516	Flagellar Assembly Protein A	N/A
COG	UHGV-1473483_1	COG1315	N/A	N/A	Flagellar assembly protein FapA, interacts with EIIAGlc	N/A
structural_annotation	UHGV-1473483_1	PF03961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1473483_2	596152.DesU5LDRAFT_1910	95.1	1.41e-21	N/A	N/A
structural_annotation	UHGV-1473483_2	PF03787,TIGR02581,COG1604	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_3	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_4	UniRef90_UPI0018995761	88.6	7.92e-22	helix-turn-helix transcriptional regulator	N/A
Pfam	UHGV-1473483_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1473483_4	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_5	UniRef90_UPI001CBE4822	92.4	5.96e-22	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_5	1226322.HMPREF1545_00148	81.6	2.06e-18	Transcriptional	N/A
Pfam	UHGV-1473483_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1473483_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1473483_5	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_6	PF13601,TIGR04176,COG1846	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_9	TIGR04165,COG3478	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_11	UniRef90_A0A3D3Y4M8	77.0	0.0000000000000527	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1473483_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1473483_11	PF12844,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1473483_12	K14059	162.1	0	int; integrase	N/A
PHROG	UHGV-1473483_12	phrog_1	164.7	0	integrase	integration and excision
UniRef90	UHGV-1473483_12	UniRef90_A0A2Z4QB94	244.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_12	1226322.HMPREF1545_00144	130.0	1.34e-32	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1473483_12	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1473483_12	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1473483_12	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1473483_13	1226322.HMPREF1545_00079	105.0	4.42e-28	N/A	N/A
structural_annotation	UHGV-1473483_14	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_15	phrog_20016	194.1	0	N/A	unknown function
UniRef90	UHGV-1473483_15	UniRef90_A0A285PT46	188.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1473483_15	1226322.HMPREF1545_00077	172.0	0	N/A	N/A
structural_annotation	UHGV-1473483_15	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_16	phrog_16490	133.4	3.8e-40	N/A	unknown function
eggNOG-mapper	UHGV-1473483_16	1408437.JNJN01000043_gene803	140.0	3.95e-38	N/A	N/A
PHROG	UHGV-1473483_17	phrog_22984	72.2	3.3e-23	N/A	unknown function
PHROG	UHGV-1473483_18	phrog_21718	103.9	1.3e-30	N/A	unknown function
eggNOG-mapper	UHGV-1473483_18	476272.RUMHYD_01768	59.3	0.00000000492	N/A	N/A
PHROG	UHGV-1473483_19	phrog_3754	102.8	2.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-1473483_19	476272.RUMHYD_01764	166.0	0	N/A	N/A
eggNOG-mapper	UHGV-1473483_20	1384065.JAGS01000001_gene2489	49.7	0.00000402	N/A	N/A
eggNOG-mapper	UHGV-1473483_21	1235798.C817_04601	76.3	0.0000000000000158	N/A	N/A
Pfam	UHGV-1473483_21	PF18912	N/A	N/A	Double zinc ribbon domain	DZR_2
structural_annotation	UHGV-1473483_21	TIGR03826	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_24	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_25	UniRef90_UPI00164EA432	220.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_25	525254.HMPREF0072_1273	208.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1473483_25	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1473483_25	NF033743	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_26	phrog_13256	62.9	2.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1473483_26	1519439.JPJG01000023_gene535	73.6	1.72e-16	N/A	N/A
PHROG	UHGV-1473483_28	phrog_937	48.5	0.00000000000018	hemolysin	other
eggNOG-mapper	UHGV-1473483_28	1519439.JPJG01000023_gene533	66.6	0.000000000000485	N/A	N/A
eggNOG-mapper	UHGV-1473483_29	411471.SUBVAR_06976	54.3	0.000000229	N/A	N/A
structural_annotation	UHGV-1473483_29	PF14600	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_31	UniRef90_A0A411ZUM8	199.0	0	Leucine-rich repeat domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_31	471875.RUMLAC_02240	129.0	3.27e-30	dockerin type I repeat-containing domain protein	N/A
Pfam	UHGV-1473483_31	PF13306	N/A	N/A	BspA type Leucine rich repeat region (6 copies)	LRR_5
COG	UHGV-1473483_31	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_31	PF13306,NF041351	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_32	phrog_13589	155.4	0	N/A	unknown function
eggNOG-mapper	UHGV-1473483_32	428125.CLOLEP_01434	206.0	0	N/A	N/A
PHROG	UHGV-1473483_33	phrog_31538	50.2	0.000000000000058	N/A	unknown function
eggNOG-mapper	UHGV-1473483_33	428125.CLOLEP_01433	65.1	0.000000000000968	N/A	N/A
structural_annotation	UHGV-1473483_34	PF08481,NF033814,COG5456	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_35	PF18614,MF_00085,NF003082,COG0361	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_36	phrog_26795	118.7	4e-35	N/A	unknown function
eggNOG-mapper	UHGV-1473483_36	742740.HMPREF9474_04294	126.0	2.15e-30	N/A	N/A
structural_annotation	UHGV-1473483_36	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_37	phrog_37549	49.7	9.4e-17	virion structural protein	head and packaging
UniRef90	UHGV-1473483_37	UniRef90_A0A3D0W045	228.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_37	1195236.CTER_5103	110.0	2.04e-22	N/A	N/A
structural_annotation	UHGV-1473483_37	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_39	phrog_6900	236.5	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1473483_39	1123312.KB904569_gene357	253.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1473483_39	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1473483_39	MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_41	phrog_18646	57.5	2.7e-16	N/A	unknown function
PHROG	UHGV-1473483_42	phrog_885	73.7	2.2e-21	major tail protein	tail
UniRef90	UHGV-1473483_42	UniRef90_A0A843J9F0	202.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_42	1504822.CCNO01000012_gene492	244.0	0	N/A	N/A
structural_annotation	UHGV-1473483_42	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_43	UniRef90_A0A415JI88	122.0	1.41e-33	N/A	N/A
structural_annotation	UHGV-1473483_43	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_44	phrog_17977	72.0	6.4e-21	N/A	unknown function
UniRef90	UHGV-1473483_44	UniRef90_UPI00141211AB	112.0	1.15e-29	head-tail adaptor protein	N/A
structural_annotation	UHGV-1473483_44	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_46	phrog_544	131.9	5.5e-39	major head protein	head and packaging
UniRef90	UHGV-1473483_46	UniRef90_A0A1C6B5R0	596.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_46	1232453.BAIF02000011_gene3359	364.0	0	N/A	N/A
Pfam	UHGV-1473483_46	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1473483_46	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_47	phrog_194	44.9	0.0000000000021	head scaffolding protein	head and packaging
UniRef90	UHGV-1473483_47	UniRef90_A0A6B9SU02	150.0	1.3999e-42	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-1473483_47	476272.RUMHYD_01775	60.5	0.0000000132	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1473483_47	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_48	phrog_5	79.6	5.6e-23	tail completion or Neck1 protein	connector
UniRef90	UHGV-1473483_48	UniRef90_UPI0018AA0B5A	191.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1473483_48	1123309.AQYB01000018_gene814	96.7	6.75e-24	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-1473483_48	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1473483_48	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1473483_48	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_49	phrog_595	128.2	9.1e-38	head maturation protease	head and packaging
UniRef90	UHGV-1473483_49	UniRef90_A0A3D3Y165	449.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_49	1504822.CCNO01000013_gene286	220.0	0	cell adhesion	N/A
Pfam	UHGV-1473483_49	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1473483_49	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1473483_49	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_49	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_50	phrog_64	149.8	7.00649e-45	portal protein	head and packaging
UniRef90	UHGV-1473483_50	UniRef90_UPI001AA0B7FF	495.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1473483_50	673376.F2VHW1_9CAUD	219.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1473483_50	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1473483_50	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
KOfam	UHGV-1473483_51	K06909	117.4	1.4e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1473483_51	phrog_10250	144.6	5.60519e-43	N/A	unknown function
UniRef90	UHGV-1473483_51	UniRef90_UPI0018A99FCF	607.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1473483_51	476272.RUMHYD_01756	440.0	0	N/A	N/A
Pfam	UHGV-1473483_51	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1473483_51	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1473483_51	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1473483_51	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1473483_51	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_52	UniRef90_UPI0018A8F249	189.0	0	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-1473483_52	1235790.C805_00037	120.0	5.14e-33	N/A	N/A
Pfam	UHGV-1473483_52	PF04218	N/A	N/A	CENP-B N-terminal DNA-binding domain	CENP-B_N
structural_annotation	UHGV-1473483_52	PF13542	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1473483_53	742738.HMPREF9460_02503	95.5	2.8e-24	N/A	N/A
structural_annotation	UHGV-1473483_53	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_54	phrog_801	65.3	1.3e-18	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1473483_54	UniRef90_UPI000B35015B	99.8	5.34e-25	N/A	N/A
eggNOG-mapper	UHGV-1473483_54	1366055.S5MLS6_9CAUD	63.5	0.0000000000802	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1473483_54	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
structural_annotation	UHGV-1473483_54	PF18909	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1473483_55	PF04606,NF007241	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_56	UniRef90_A9U7U9	108.0	4.59e-24	Predicted protein (Fragment)	N/A
eggNOG-mapper	UHGV-1473483_56	1444310.JANV01000162_gene1216	114.0	3.04e-27	N/A	N/A
PHROG	UHGV-1473483_57	phrog_1770	54.6	0.0000000000000022	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1473483_57	536233.CLO_1822	147.0	7.6651e-43	N/A	N/A
structural_annotation	UHGV-1473483_57	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-1473483_58	UniRef90_UPI0019D1E2CF	256.0	0	FAD-dependent thymidylate synthase	N/A
eggNOG-mapper	UHGV-1473483_58	742735.HMPREF9467_00909	203.0	0	N/A	N/A
structural_annotation	UHGV-1473483_58	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_63	phrog_38832	58.6	6.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1473483_63	665956.HMPREF1032_03087	62.8	0.000000000274	N/A	N/A
structural_annotation	UHGV-1473483_63	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_65	phrog_7704	40.6	0.000000000025	N/A	unknown function
Pfam	UHGV-1473483_65	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1473483_65	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_69	phrog_15768	48.7	0.00000000000014	N/A	unknown function
UniRef90	UHGV-1473483_69	UniRef90_A0A7C1PUJ6	100.0	2.87e-22	N/A	N/A
COG	UHGV-1473483_69	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1473483_69	PF07120,COG3756	N/A	N/A	N/A	N/A
KOfam	UHGV-1473483_70	K03111	130.4	2.2e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1473483_70	phrog_44	134.9	5.70001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1473483_70	UniRef90_UPI001C02B0E9	181.0	0	single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1473483_70	693746.OBV_12860	174.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1473483_70	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1473483_70	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1473483_70	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1473483_70	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1473483_70	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_72	phrog_7370	60.8	2e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1473483_72	UniRef90_A0A3D1LDS4	151.0	1.4013e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_72	1232449.BAHV02000016_gene1841	84.7	4.6e-20	HNH nucleases	N/A
Pfam	UHGV-1473483_72	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-1473483_73	phrog_72	59.4	4e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1473483_73	UniRef90_A0A8D9PDS2	168.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-1473483_73	445972.ANACOL_01825	130.0	5.52e-36	N/A	N/A
structural_annotation	UHGV-1473483_73	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_74	phrog_155	157.4	0	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1473483_74	UniRef90_UPI00130EB09C	192.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1473483_74	748224.HMPREF9436_03360	175.0	0	ERF superfamily	N/A
Pfam	UHGV-1473483_74	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1473483_74	PF04404,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-1473483_77	phrog_4973	71.9	7.6e-21	N/A	unknown function
UniRef90	UHGV-1473483_77	UniRef90_UPI001D0904CC	81.6	6.62e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1473483_77	1072685.IX83_07155	59.7	0.0000000000381	Helix-turn-helix domain	N/A
Pfam	UHGV-1473483_77	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-1473483_77	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1473483	Yes	40,913	53	99	1
UHGV-0074247	No	40,913	53	99	1
UHGV-1444642	No	24,615	52	60	1
UHGV-0182034	No	23,604	52	57	1
UHGV-0181875	No	17,035	55	42	1