vOTU vOTU-068445

vOTU: vOTU-068445

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-068445
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00163 → vSUBFAM-03081 → vGENUS-15354 → vSUBGEN-26735 → vOTU-068445
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737 → UBA737 sp002431945
Host range breadth	Species
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0000781
Biosample ID	N/A
Genome length (bp)	35,607 bps
CheckV completeness	99.24% (High-quality)
CDS count	49
CDS density	92.70%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737 → UBA737 sp002431945	Total connections	8	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.24)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0000781_1	K22300	56.0	9e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0000781_1	phrog_8	67.7	2.2e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000781_1	UniRef90_A0A316MDQ3	71.2	0.00000000000194	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0000781_1	1462527.CCDM010000002_gene1525	64.7	0.0000000000323	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0000781_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000781_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0000781_4	phrog_585	76.2	4.5e-22	N/A	unknown function
UniRef90	UHGV-0000781_4	UniRef90_UPI001966EB25	80.5	4.32e-17	N/A	N/A
eggNOG-mapper	UHGV-0000781_4	1449050.JNLE01000005_gene3955	97.8	9.55e-25	N/A	N/A
Pfam	UHGV-0000781_4	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-0000781_4	PF10711,TIGR03433,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0000781_5	UniRef90_A0A354M9D8	92.0	4.51e-23	Toxin-antitoxin system, antitoxin component, Xre family protein	N/A
eggNOG-mapper	UHGV-0000781_5	1235796.C815_00951	49.7	0.000000563	N/A	N/A
Pfam	UHGV-0000781_5	PF02954	N/A	N/A	Bacterial regulatory protein, Fis family	HTH_8
structural_annotation	UHGV-0000781_5	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000781_7	PF01376	N/A	N/A	N/A	N/A
KOfam	UHGV-0000781_9	K02338	199.1	0	dnaN; DNA polymerase III subunit beta [EC:2.7.7.7]	N/A
PHROG	UHGV-0000781_9	phrog_947	150.7	9.80909e-45	DNA polymerase processivity factor	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000781_9	UniRef90_A0A354M9D1	691.0	0	DNA polymerase III subunit beta	N/A
eggNOG-mapper	UHGV-0000781_9	1111134.HMPREF1253_0903	107.0	2.09e-23	Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP-independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria	N/A
Pfam	UHGV-0000781_9	PF00712	N/A	N/A	DNA polymerase III beta subunit, N-terminal domain	DNA_pol3_beta
Pfam	UHGV-0000781_9	PF02767	N/A	N/A	DNA polymerase III beta subunit, central domain	DNA_pol3_beta_2
COG	UHGV-0000781_9	COG0592	N/A	N/A	DNA polymerase III sliding clamp (beta) subunit, PCNA homolog	N/A
structural_annotation	UHGV-0000781_9	PF02768,PF00712,PF02767,MF_00317,TIGR00663,COG0592	N/A	N/A	N/A	N/A
KOfam	UHGV-0000781_10	K07319	97.2	1.5e-28	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0000781_10	phrog_16	234.6	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000781_10	UniRef90_R6E553	1306.0	0	DNA methylase family protein	N/A
eggNOG-mapper	UHGV-0000781_10	1123489.AUAN01000010_gene370	1195.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0000781_10	MTase_II_00085	42.1	0.000000000000019	Type II methyltransferase	RM
Pfam	UHGV-0000781_10	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0000781_10	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0000781_10	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0000781_10	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
KOfam	UHGV-0000781_11	K00390	74.9	3.7e-22	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0000781_11	phrog_424	145.9	2.10195e-43	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0000781_11	UniRef90_A0A3D4KZM8	370.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0000781_11	1280696.ATVY01000096_gene1971	332.0	0	N/A	N/A
Pfam	UHGV-0000781_11	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0000781_11	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0000781_11	PF01507,MF_00063,NF006327,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_12	phrog_13321	62.5	7.6e-19	N/A	unknown function
UniRef90	UHGV-0000781_12	UniRef90_UPI00030D2C45	326.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-0000781_12	1007096.BAGW01000031_gene122	326.0	0	PFAM Radical SAM	N/A
Pfam	UHGV-0000781_12	PF04055	N/A	N/A	Radical SAM superfamily	Radical_SAM
COG	UHGV-0000781_12	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0000781_12	PF20903,MF_00917,NF033668,COG4422	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000781_13	318464.IO99_07375	75.9	1.3e-16	N/A	N/A
PHROG	UHGV-0000781_15	phrog_3136	123.0	1.2e-36	N/A	unknown function
UniRef90	UHGV-0000781_15	UniRef90_A0A3D0HBD2	125.0	4.93e-33	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0000781_15	1095770.CAHE01000088_gene1838	55.8	0.000000108	ASCH	N/A
COG	UHGV-0000781_15	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0000781_15	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
KOfam	UHGV-0000781_17	K10906	97.9	2.8e-36	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0000781_17	phrog_412	251.7	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000781_17	UniRef90_A0A3D4T735	448.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000781_17	1454004.AW11_02382	167.0	0	N/A	N/A
Pfam	UHGV-0000781_17	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0000781_17	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0000781_17	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_18	phrog_3657	342.7	0	N/A	unknown function
eggNOG-mapper	UHGV-0000781_18	1089546.AQUI01000002_gene127	208.0	0	N/A	N/A
KOfam	UHGV-0000781_19	K03111	135.1	8.1e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0000781_19	phrog_44	139.5	2.20004e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000781_19	UniRef90_A0A3D4T9F8	253.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0000781_19	1507.HMPREF0262_03706	140.0	1.31e-40	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0000781_19	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0000781_19	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0000781_19	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0000781_19	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0000781_19	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_20	phrog_3490	121.2	7.4e-36	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000781_20	UniRef90_A0A3D4T734	299.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000781_20	357809.Cphy_2986	110.0	9.86e-29	N/A	N/A
Pfam	UHGV-0000781_20	PF02732	N/A	N/A	ERCC4 domain	ERCC4
structural_annotation	UHGV-0000781_20	PF03834,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0000781_21	K02316	84.8	1.3e-24	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0000781_21	phrog_11992	102.0	7.5e-30	N/A	unknown function
UniRef90	UHGV-0000781_21	UniRef90_A0A1H9YJB0	88.6	3.54e-19	CHC2 zinc finger	N/A
eggNOG-mapper	UHGV-0000781_21	411460.RUMTOR_02069	87.8	1.24e-19	CHC2 zinc finger	N/A
PADLOC	UHGV-0000781_21	drt-UG29	72.3	5.1e-21	DRT	DRT
Pfam	UHGV-0000781_21	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0000781_21	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0000781_21	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_22	phrog_8841	441.9	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000781_22	UniRef90_UPI001D052EA3	451.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000781_22	658655.HMPREF0988_02581	447.0	0	N/A	N/A
Pfam	UHGV-0000781_22	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0000781_22	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0000781_22	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000781_22	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0000781_25	K06909	217.2	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0000781_25	phrog_3717	105.3	9.2e-32	terminase large subunit	head and packaging
UniRef90	UHGV-0000781_25	UniRef90_A0A2K3J9D8	719.0	0	Terminase_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000781_25	1273103.NM10_06806	264.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0000781_25	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
COG	UHGV-0000781_25	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0000781_25	PF04466,PF17289,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_26	phrog_533	134.8	5.5e-40	portal protein	head and packaging
UniRef90	UHGV-0000781_26	UniRef90_A0A136WBU7	154.0	8.28e-39	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-0000781_26	641112.ACOK01000073_gene2889	118.0	2e-26	N/A	N/A
structural_annotation	UHGV-0000781_26	PF05133,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_27	phrog_581	171.9	0	minor head protein	head and packaging
UniRef90	UHGV-0000781_27	UniRef90_A0A1C6B625	286.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0000781_27	1226322.HMPREF1545_00046	193.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0000781_27	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0000781_27	PF15542	N/A	N/A	Bacterial toxin 50	Ntox50
COG	UHGV-0000781_27	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000781_27	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_28	phrog_1865	49.3	0.000000000000067	N/A	unknown function
PHROG	UHGV-0000781_30	phrog_422	243.9	0	major head protein	head and packaging
UniRef90	UHGV-0000781_30	UniRef90_W0U896	392.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0000781_30	1160721.RBI_II00538	392.0	0	N/A	N/A
structural_annotation	UHGV-0000781_30	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_31	phrog_541	79.4	4.1e-23	head-tail adaptor	connector
PHROG	UHGV-0000781_32	phrog_3366	79.9	3.1e-23	N/A	unknown function
Pfam	UHGV-0000781_32	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0000781_32	PF20536	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000781_33	PF12691	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000781_34	411902.CLOBOL_00131	60.1	0.00000000132	Minor capsid protein	N/A
structural_annotation	UHGV-0000781_34	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_35	phrog_3099	45.7	0.0000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0000781_35	665956.HMPREF1032_03060	60.1	0.00000000942	N/A	N/A
structural_annotation	UHGV-0000781_35	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-0000781_37	K07741	100.2	4.8e-29	antB; anti-repressor protein	N/A
PHROG	UHGV-0000781_37	phrog_130	269.8	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0000781_37	UniRef90_A0A0K8JIV6	327.0	0	Bro-N domain-containing protein	N/A
eggNOG-mapper	UHGV-0000781_37	1391647.AVSV01000003_gene1780	317.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0000781_37	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0000781_37	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0000781_37	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0000781_37	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_38	phrog_11299	86.4	3.7e-25	N/A	unknown function
PHROG	UHGV-0000781_39	phrog_706	113.4	1.9e-33	N/A	unknown function
UniRef90	UHGV-0000781_39	UniRef90_UPI0011DC8B0C	162.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0000781_39	411459.RUMOBE_01383	162.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0000781_39	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0000781_39	PF06854	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000781_40	1120746.CCNL01000014_gene2105	74.7	0.0000000000635	tape measure	N/A
COG	UHGV-0000781_40	COG1511	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0000781_41	1232449.BAHV02000010_gene2724	73.2	0.000000000000012	N/A	N/A
structural_annotation	UHGV-0000781_41	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_42	phrog_32744	66.9	1.9e-19	N/A	unknown function
eggNOG-mapper	UHGV-0000781_42	411902.CLOBOL_00124	84.7	0.0000000000000262	N/A	N/A
structural_annotation	UHGV-0000781_42	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_44	phrog_24267	103.8	2e-30	N/A	unknown function
UniRef90	UHGV-0000781_44	UniRef90_R5LPM8	113.0	3.34e-29	Putative truncated prophage LambdaSa1 minor structural protein	N/A
eggNOG-mapper	UHGV-0000781_44	764299.STRIC_1424	102.0	2.71e-24	tail collar domain protein	N/A
COG	UHGV-0000781_44	COG4675	N/A	N/A	Phage tail collar domain	N/A
Pfam	UHGV-0000781_45	PF14207	N/A	N/A	DpnD/PcfM-like protein	DpnD-PcfM
PHROG	UHGV-0000781_46	phrog_19695	44.4	0.0000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0000781_46	476272.RUMHYD_00002	64.7	0.000000029	N/A	N/A
KOfam	UHGV-0000781_47	K03088	47.3	0.00000000000034	rpoE; RNA polymerase sigma-70 factor, ECF subfamily	N/A
UniRef90	UHGV-0000781_47	UniRef90_A0A354MB05	371.0	0	Sigma70_r4 domain-containing protein	N/A
Pfam	UHGV-0000781_47	PF08281	N/A	N/A	Sigma-70, region 4	Sigma70_r4_2
NCBIFam	UHGV-0000781_47	TIGR02937.1	N/A	N/A	sigma-70 family RNA polymerase sigma factor	N/A
COG	UHGV-0000781_47	COG1595	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	N/A
KOfam	UHGV-0000781_48	K07273	172.7	0	acm; lysozyme	N/A
PHROG	UHGV-0000781_48	phrog_291	146.9	1.59748e-43	endolysin	lysis
UniRef90	UHGV-0000781_48	UniRef90_A0A354MB03	619.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0000781_48	1232446.BAIE02000049_gene144	180.0	0	Glycosyl hydrolase, family 25	N/A
Pfam	UHGV-0000781_48	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0000781_48	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0000781_48	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0000781_48	PF01183,PF01476,TIGR02899,NF007360,COG3757,COG1388	N/A	N/A	N/A	N/A
PHROG	UHGV-0000781_49	phrog_443	53.9	0.0000000000000053	holin	lysis
UniRef90	UHGV-0000781_49	UniRef90_R6R2Q3	88.2	1.09e-21	Conserved domain protein	N/A
eggNOG-mapper	UHGV-0000781_49	397287.C807_03698	85.5	2.64e-21	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0000781_49	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0000781_49	PF16945	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0000781	Yes	35,607	42	99	1