vOTU vOTU-068468

vOTU: vOTU-068468

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-068468
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-02394 → vGENUS-05237 → vSUBGEN-11238 → vOTU-068468
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae
Host range breadth	Family
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0021429
Biosample ID	SAMEA4765653
Genome length (bp)	39,709 bps
CheckV completeness	99.90% (High-quality)
CDS count	42
CDS density	93.57%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae	Total connections	18	Host agreement	88.89
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → V9D3004 → ERR7747255_bin.237	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0021429_1	phrog_22978	71.8	2.8e-21	N/A	unknown function
eggNOG-mapper	UHGV-0021429_1	588581.Cpap_1541	70.5	0.00000000494	N/A	N/A
Pfam	UHGV-0021429_1	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
UniRef90	UHGV-0021429_2	UniRef90_R6HIP3	87.8	0.00000000000000178	PG_binding_1 domain-containing protein	N/A
PHROG	UHGV-0021429_4	phrog_511	208.4	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0021429_4	1226322.HMPREF1545_00785	296.0	0	N/A	N/A
structural_annotation	UHGV-0021429_4	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_5	phrog_12105	99.9	2.1e-29	N/A	unknown function
eggNOG-mapper	UHGV-0021429_5	1519439.JPJG01000060_gene1891	57.8	0.00000000501	N/A	N/A
PHROG	UHGV-0021429_6	phrog_15239	78.3	7.4e-23	N/A	unknown function
PHROG	UHGV-0021429_7	phrog_1357	245.1	0	major head protein	head and packaging
UniRef90	UHGV-0021429_7	UniRef90_A0A329UF15	397.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0021429_7	657322.FPR_02330	387.0	0	N/A	N/A
NCBIFam	UHGV-0021429_7	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0021429_7	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_8	phrog_13908	234.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0021429_8	1410650.JHWL01000003_gene2831	155.0	1.32983e-42	N/A	N/A
KOfam	UHGV-0021429_9	K07584	61.3	2e-17	N/A	N/A
PHROG	UHGV-0021429_9	phrog_4478	54.1	0.0000000000000014	peptidase	other
UniRef90	UHGV-0021429_9	UniRef90_UPI001961A1AB	53.1	0.00000233	ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0021429_9	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0021429_9	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_10	phrog_156	332.9	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0021429_10	748224.HMPREF9436_01396	587.0	0	N/A	N/A
structural_annotation	UHGV-0021429_10	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0021429_11	K06909	100.5	2.1e-29	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0021429_11	phrog_979	211.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0021429_11	UniRef90_A0A844DV87	678.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-0021429_11	411483.FAEPRAA2165_01044	682.0	0	Terminase-like family	N/A
Pfam	UHGV-0021429_11	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0021429_11	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0021429_11	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_12	phrog_309	143.7	6.89439e-43	terminase small subunit	head and packaging
UniRef90	UHGV-0021429_12	UniRef90_UPI000AC737F1	146.0	9.97024e-42	helix-turn-helix domain containing protein	N/A
eggNOG-mapper	UHGV-0021429_12	411470.RUMGNA_02210	139.0	1.45e-39	transposase activity	N/A
COG	UHGV-0021429_12	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0021429_12	PF07141	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021429_14	1235800.C819_02253	62.4	0.00000000199	N/A	N/A
PHROG	UHGV-0021429_15	phrog_3584	164.3	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0021429_15	483218.BACPEC_01173	271.0	0	N/A	N/A
structural_annotation	UHGV-0021429_15	PF21578,NF041486	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021429_16	UniRef90_UPI0018A09237	65.5	0.0000000000209	N/A	N/A
eggNOG-mapper	UHGV-0021429_16	1256908.HMPREF0373_00479	57.4	0.00000000486	N/A	N/A
structural_annotation	UHGV-0021429_16	PF14359,COG3613	N/A	N/A	N/A	N/A
KOfam	UHGV-0021429_17	K03427	107.0	1.9e-31	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0021429_17	phrog_6380	232.0	0	DNA methyltransferase	other
UniRef90	UHGV-0021429_17	UniRef90_UPI00189920FD	512.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0021429_17	1095750.HMPREF9970_0172	256.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
PADLOC	UHGV-0021429_17	MTase_I_00005	82.6	8e-25	Type I methyltransferase	RM
Pfam	UHGV-0021429_17	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0021429_17	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0021429_17	PF02384,TIGR00497,COG0286	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_18	phrog_6380	142.3	3.30006e-42	DNA methyltransferase	other
UniRef90	UHGV-0021429_18	UniRef90_UPI00164BDD89	224.0	0	N-6 DNA methylase	N/A
eggNOG-mapper	UHGV-0021429_18	1095750.HMPREF9970_0171	160.0	0	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
Pfam	UHGV-0021429_18	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0021429_18	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0021429_18	PF02475,MF_02217,NF000058,COG2263	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_20	phrog_5781	72.1	6.4e-21	N/A	unknown function
UniRef90	UHGV-0021429_20	UniRef90_UPI00156DE71E	78.6	0.00000000000000213	N/A	N/A
eggNOG-mapper	UHGV-0021429_20	585502.HMPREF0645_2521	61.2	0.00000000271	N/A	N/A
Pfam	UHGV-0021429_20	PF14359	N/A	N/A	N/A	DUF4406
KOfam	UHGV-0021429_21	K03497	136.9	2.4e-40	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0021429_21	phrog_6218	207.0	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021429_21	UniRef90_R7CB61	343.0	0	Chromosome partitioning protein ParB family	N/A
eggNOG-mapper	UHGV-0021429_21	626523.GCWU000342_01034	271.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0021429_21	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0021429_21	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0021429_21	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0021429_21	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021429_23	UniRef90_A0A3A8WMX4	120.0	6.18e-33	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0021429_23	545243.BAEV01000100_gene2460	93.6	9.14e-23	HNH nucleases	N/A
COG	UHGV-0021429_23	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0021429_23	COG5126	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_25	phrog_2889	329.5	0	N/A	unknown function
UniRef90	UHGV-0021429_25	UniRef90_UPI000E4F60BD	611.0	0	SUMF1/EgtB/PvdO family nonheme iron enzyme	N/A
eggNOG-mapper	UHGV-0021429_25	411463.EUBVEN_00485	583.0	0	PFAM Formylglycine-generating sulfatase enzyme	N/A
Pfam	UHGV-0021429_25	PF03781	N/A	N/A	Sulfatase-modifying factor enzyme 1	FGE-sulfatase
COG	UHGV-0021429_25	COG1262	N/A	N/A	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	N/A
structural_annotation	UHGV-0021429_25	PF03781,TIGR03529,COG1262	N/A	N/A	N/A	N/A
KOfam	UHGV-0021429_29	K18830	85.3	7.6e-25	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0021429_29	phrog_8	57.6	9.2e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021429_29	UniRef90_UPI0006BF92BD	158.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0021429_29	445972.ANACOL_03315	134.0	5.95e-39	N/A	N/A
Pfam	UHGV-0021429_29	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0021429_29	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0021429_29	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021429_31	1410626.JHXB01000001_gene2054	59.3	0.000000206	rare lipoprotein A	N/A
COG	UHGV-0021429_31	COG4305	N/A	N/A	Peptidoglycan-binding domain, expansin YoaJ	N/A
PHROG	UHGV-0021429_33	phrog_11747	209.3	0	N/A	unknown function
UniRef90	UHGV-0021429_33	UniRef90_A0A373CZC1	446.0	0	Serine dehydrogenasease	N/A
eggNOG-mapper	UHGV-0021429_33	1127692.HMPREF9075_01248	306.0	0	Serine dehydrogenase proteinase	N/A
Pfam	UHGV-0021429_33	PF01972	N/A	N/A	Serine dehydrogenase proteinase	SDH_sah
COG	UHGV-0021429_33	COG1030	N/A	N/A	Membrane-bound serine protease NfeD, ClpP class	N/A
structural_annotation	UHGV-0021429_33	PF01972,MF_00444,TIGR00706,COG0740	N/A	N/A	N/A	N/A
KOfam	UHGV-0021429_34	K06400	309.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0021429_34	phrog_95	352.6	0	integrase	integration and excision
UniRef90	UHGV-0021429_34	UniRef90_R6YY58	629.0	0	Resolvase N-terminal domain	N/A
eggNOG-mapper	UHGV-0021429_34	1235800.C819_00524	352.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0021429_34	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0021429_34	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0021429_34	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0021429_34	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0021429_34	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021429_35	UniRef90_UPI001570CAF6	207.0	0	ImmA/IrrE family metallo-endopeptidase	N/A
eggNOG-mapper	UHGV-0021429_35	592031.GCWU000322_00057	80.9	0.00000000000000381	N/A	N/A
eggNOG-mapper	UHGV-0021429_36	1403948.Q618_VCMC00003G0140	101.0	9.17e-25	N/A	N/A
PHROG	UHGV-0021429_37	phrog_13890	67.7	1.1e-19	N/A	unknown function
UniRef90	UHGV-0021429_37	UniRef90_A0A3A9BRD5	108.0	2.66e-29	ABC transporter ATP-binding protein	N/A
eggNOG-mapper	UHGV-0021429_37	1501230.ET33_16755	52.4	0.0000000503	N/A	N/A
structural_annotation	UHGV-0021429_37	PF10723,NF010256,COG4710	N/A	N/A	N/A	N/A
KOfam	UHGV-0021429_38	K17733	147.0	1.09301e-43	cwlK; peptidoglycan LD-endopeptidase CwlK [EC:3.4.-.-]	N/A
PHROG	UHGV-0021429_38	phrog_2649	140.5	1.40004e-41	endolysin	lysis
UniRef90	UHGV-0021429_38	UniRef90_R6DUN0	237.0	0	Peptidase_M15_4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0021429_38	1235802.C823_01946	164.0	0	D-alanyl-D-alanine carboxypeptidase	N/A
Pfam	UHGV-0021429_38	PF13539	N/A	N/A	D-alanyl-D-alanine carboxypeptidase	Peptidase_M15_4
COG	UHGV-0021429_38	COG1876	N/A	N/A	LD-carboxypeptidase LdcB, LAS superfamily	N/A
structural_annotation	UHGV-0021429_38	PF02557,MF_01924,NF000472,COG1876	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_39	phrog_199	85.3	7e-25	holin	lysis
UniRef90	UHGV-0021429_39	UniRef90_A0A3R6TFD1	167.0	0	Holin	N/A
eggNOG-mapper	UHGV-0021429_39	742740.HMPREF9474_02333	171.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-0021429_39	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-0021429_39	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-0021429_39	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-0021429_39	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_41	phrog_25468	84.4	7e-40	N/A	unknown function
eggNOG-mapper	UHGV-0021429_41	657322.FPR_21920	87.4	0.0000000000000151	N/A	N/A
Pfam	UHGV-0021429_41	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
COG	UHGV-0021429_41	COG5563	N/A	N/A	N/A	N/A
PHROG	UHGV-0021429_42	phrog_22978	546.6	0	N/A	unknown function
UniRef90	UHGV-0021429_42	UniRef90_A0A396QCY9	444.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0021429_42	1410650.JHWL01000003_gene2814	481.0	0	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0021429	Yes	39,709	44	100	1