vOTU vOTU-068561

vOTU: vOTU-068561

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-068561
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900551995
Taxonomy (UHGV)	vFAM-00006 → vSUBFAM-00200 → vGENUS-01453 → vSUBGEN-01215 → vOTU-068561
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1396488
Biosample ID	SAMN05414986
Genome length (bp)	32,429 bps
CheckV completeness	95.10% (High-quality)
CDS count	49
CDS density	94.04%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83	Total connections	166	Host agreement	93.37
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900551995	Total connections	4	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 95.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1396488_1	K03497	46.8	0.000000000000042	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1396488_1	phrog_21498	276.5	0	N/A	unknown function
UniRef90	UHGV-1396488_1	UniRef90_A0A7X2P836	271.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_1	469378.Ccur_02830	261.0	0	DNA binding	N/A
PADLOC	UHGV-1396488_1	MTase_II_00015	90.7	2.3e-26	Type II methyltransferase	RM
Pfam	UHGV-1396488_1	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1396488_1	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1396488_1	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_2	phrog_5110	61.5	9.5e-18	terminase small subunit	head and packaging
UniRef90	UHGV-1396488_2	UniRef90_UPI00195E8788	123.0	6.65e-33	P27 family phage terminase small subunit	N/A
Pfam	UHGV-1396488_2	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-1396488_2	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_3	phrog_9	246.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-1396488_3	UniRef90_UPI0018737C02	897.0	0	terminase large subunit	N/A
eggNOG-mapper	UHGV-1396488_3	1235792.C808_00083	595.0	0	Phage terminase-like protein large subunit	N/A
Pfam	UHGV-1396488_3	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1396488_3	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1396488_3	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1396488_3	PF20441,PF03354,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_4	phrog_12	123.5	6.1e-37	portal protein	head and packaging
UniRef90	UHGV-1396488_4	UniRef90_UPI0018755FA4	508.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1396488_4	610130.Closa_0742	290.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-1396488_4	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-1396488_4	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-1396488_4	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1396488_4	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1396488_5	K01358	133.5	2.2e-39	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1396488_5	phrog_94	251.8	0	head maturation protease	head and packaging
UniRef90	UHGV-1396488_5	UniRef90_A0A1Y4BT12	349.0	0	ATP-dependent Clp protease proteolytic subunit	N/A
eggNOG-mapper	UHGV-1396488_5	349161.Dred_2605	300.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1396488_5	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1396488_5	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1396488_5	PF00574,MF_00444,TIGR00493,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_6	phrog_10	137.5	1.50001e-40	major head protein	head and packaging
UniRef90	UHGV-1396488_6	UniRef90_G9YSC0	687.0	0	Cadherin-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_6	1235792.C808_00086	421.0	0	Phage capsid family	N/A
Pfam	UHGV-1396488_6	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
Pfam	UHGV-1396488_6	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
NCBIFam	UHGV-1396488_6	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1396488_6	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1396488_6	PF05065,PF12733,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_7	phrog_749	67.6	1.7e-19	N/A	unknown function
UniRef90	UHGV-1396488_7	UniRef90_UPI001C0FB8A8	52.8	0.000000786	head-tail connector protein	N/A
eggNOG-mapper	UHGV-1396488_7	349161.Dred_2603	79.0	8.96e-18	N/A	N/A
PHROG	UHGV-1396488_8	phrog_19734	113.5	1.4e-33	N/A	unknown function
UniRef90	UHGV-1396488_8	UniRef90_A0A6I7GNS7	119.0	4.45e-32	Phage head closure protein	N/A
eggNOG-mapper	UHGV-1396488_8	349161.Dred_2602	86.7	2.94e-20	N/A	N/A
structural_annotation	UHGV-1396488_8	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396488_9	999413.HMPREF1094_02005	83.6	2.78e-19	N/A	N/A
structural_annotation	UHGV-1396488_9	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_10	phrog_5	40.6	0.000000000046	tail completion or Neck1 protein	connector
UniRef90	UHGV-1396488_10	UniRef90_R6UNR2	130.0	1.15e-35	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1396488_10	908340.HMPREF9406_2573	130.0	1.92e-36	N/A	N/A
structural_annotation	UHGV-1396488_10	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_11	phrog_88	82.4	5.8e-24	major tail protein	tail
eggNOG-mapper	UHGV-1396488_11	33035.JPJF01000039_gene278	68.6	0.0000000000152	N/A	N/A
structural_annotation	UHGV-1396488_11	PF06488,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_14	phrog_6900	252.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1396488_14	UniRef90_A0A373CK98	300.0	0	PblA (Fragment)	N/A
eggNOG-mapper	UHGV-1396488_14	1216932.CM240_0625	336.0	0	tape measure	N/A
COG	UHGV-1396488_14	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1396488_14	PF05537,MF_04138,COG5281	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_15	phrog_33	81.5	1.7e-23	distal tail protein Dit	tail
UniRef90	UHGV-1396488_15	UniRef90_A0A2X2UUQ3	162.0	1.4013e-45	Phage putative tail component	N/A
eggNOG-mapper	UHGV-1396488_15	994573.T472_0211980	95.9	2.78e-21	tail component	N/A
COG	UHGV-1396488_15	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-1396488_15	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_16	phrog_1067	298.0	0	minor head protein	head and packaging
UniRef90	UHGV-1396488_16	UniRef90_A0A316NPB5	500.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_16	1123263.AUKY01000068_gene489	351.0	0	Phage minor structural protein	N/A
Pfam	UHGV-1396488_16	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-1396488_16	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-1396488_16	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1396488_16	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396488_17	PF17642	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396488_18	1408437.JNJN01000002_gene1389	58.5	0.00000299	N/A	N/A
Pfam	UHGV-1396488_18	PF10651	N/A	N/A	BppU N-terminal domain	BppU_N
structural_annotation	UHGV-1396488_18	PF10651,PF04862,TIGR04362,COG5513	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_19	phrog_24451	49.0	0.00000000000011	N/A	unknown function
eggNOG-mapper	UHGV-1396488_19	1408437.JNJN01000040_gene189	129.0	8.65e-37	N/A	N/A
PHROG	UHGV-1396488_20	phrog_30034	105.4	7.2e-31	N/A	unknown function
UniRef90	UHGV-1396488_20	UniRef90_R6RWR8	143.0	2.06001e-40	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-1396488_20	411460.RUMTOR_02099	126.0	4.04e-34	N/A	N/A
Pfam	UHGV-1396488_20	PF02839	N/A	N/A	Carbohydrate-binding module family 5/12	CBM_5_12
structural_annotation	UHGV-1396488_20	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_21	phrog_1863	64.4	1.1e-18	N/A	unknown function
eggNOG-mapper	UHGV-1396488_21	748224.HMPREF9436_00408	97.4	8.36e-26	N/A	N/A
PHROG	UHGV-1396488_22	phrog_881	87.8	6.1e-26	holin	lysis
UniRef90	UHGV-1396488_22	UniRef90_A0A8D9PDR9	93.6	1.28e-23	Holin	N/A
eggNOG-mapper	UHGV-1396488_22	742740.HMPREF9474_02251	90.1	4.81e-23	Putative phage holin Dp-1	N/A
Pfam	UHGV-1396488_22	PF16938	N/A	N/A	Putative phage holin Dp-1	Phage_holin_Dp1
structural_annotation	UHGV-1396488_22	PF16938	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_23	phrog_435	55.8	9.1e-16	endolysin	lysis
UniRef90	UHGV-1396488_23	UniRef90_A0A8D9PDS4	416.0	0	Cell wall hydrolase/autolysin	N/A
eggNOG-mapper	UHGV-1396488_23	1226322.HMPREF1545_01953	89.7	9.49e-19	N-acetylmuramoyl-L-alanine amidase	N/A
COG	UHGV-1396488_23	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1396488_23	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
KOfam	UHGV-1396488_24	K14059	149.9	2.66247e-44	int; integrase	N/A
PHROG	UHGV-1396488_24	phrog_1	146.4	2.39622e-43	integrase	integration and excision
UniRef90	UHGV-1396488_24	UniRef90_UPI001EDEB0AD	294.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1396488_24	1226322.HMPREF1545_00144	240.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1396488_24	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1396488_24	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1396488_24	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396488_25	1262449.CP6013_2082	169.0	0	N/A	N/A
structural_annotation	UHGV-1396488_25	PF11631,TIGR03066	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396488_27	1226325.HMPREF1548_05412	57.0	0.000000459	Peptidoglycan-binding domain 1 protein	N/A
COG	UHGV-1396488_27	COG2333	N/A	N/A	DNA uptake channel protein ComEC C-terminal domain, metallo-beta-lactamase superfamily	N/A
UniRef90	UHGV-1396488_28	UniRef90_UPI001898A157	99.4	9.13e-25	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_28	1403946.Q615_SPAC00127G0165	51.2	0.00000469	Peptidase S24-like	N/A
Pfam	UHGV-1396488_28	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-1396488_28	COG2932	N/A	N/A	Phage repressor protein C, contains Cro/C1-type HTH and peptisase s24 domains	N/A
structural_annotation	UHGV-1396488_28	PF13443,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-1396488_31	K22300	55.5	0.0000000000000013	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1396488_31	phrog_3	42.7	0.000000000022	transcriptional repressor	transcription regulation
UniRef90	UHGV-1396488_31	UniRef90_UPI000F0D19B9	63.2	0.00000000000979	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_31	1125712.HMPREF1316_2427	53.9	0.000000112	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-1396488_31	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1396488_31	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1396488_31	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_32	phrog_6499	121.6	3.3e-36	transcriptional regulator	transcription regulation
UniRef90	UHGV-1396488_32	UniRef90_G9YL68	141.0	3.59e-40	DNA-binding helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1396488_32	742738.HMPREF9460_00847	141.0	4.19997e-41	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1396488_32	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1396488_32	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-1396488_32	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_34	phrog_270	112.4	5.3e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396488_34	UniRef90_UPI001F170B82	181.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_34	742738.HMPREF9460_00851	176.0	0	Helix-turn-helix domain	N/A
Pfam	UHGV-1396488_34	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-1396488_34	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-1396488_35	K02314	260.9	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1396488_35	phrog_19	216.5	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396488_35	UniRef90_UPI00195856D7	386.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-1396488_35	1226322.HMPREF1545_00095	250.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1396488_35	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1396488_35	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1396488_35	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1396488_35	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
KOfam	UHGV-1396488_36	K03496	172.7	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1396488_36	phrog_164	133.1	2.1e-39	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396488_36	UniRef90_UPI000318E277	263.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-1396488_36	1007096.BAGW01000033_gene1614	253.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-1396488_36	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1396488_36	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1396488_36	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1396488_37	K03497	81.6	1.5e-23	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1396488_37	phrog_27290	360.7	0	N/A	unknown function
UniRef90	UHGV-1396488_37	UniRef90_UPI0003130F10	306.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_37	1007096.BAGW01000033_gene1613	306.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1396488_37	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1396488_37	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1396488_37	PF12961,PF02195,MF_02015,MF_00684,TIGR04285,NF003443,COG1475,COG3097	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_47	phrog_3584	74.9	1e-21	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1396488_47	693746.OBV_19950	246.0	0	N/A	N/A
structural_annotation	UHGV-1396488_47	PF21578	N/A	N/A	N/A	N/A
PHROG	UHGV-1396488_48	phrog_119	70.8	1.8e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396488_48	UniRef90_G9YSB5	150.0	4.2039e-45	HNH domain-containing protein	N/A
eggNOG-mapper	UHGV-1396488_48	1235792.C808_00081	81.6	1.6e-18	HNH nucleases	N/A
Pfam	UHGV-1396488_48	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1396488_48	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1396488	Yes	32,429	60	95	1
UHGV-0142260	No	27,681	61	81	1
UHGV-0146125	No	24,067	60	71	1