vOTU vOTU-068635

vOTU: vOTU-068635

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-068635
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01464 → vGENUS-01468 → vSUBGEN-26312 → vOTU-068635
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1522121
Biosample ID	SAMN03418260
Genome length (bp)	31,478 bps
CheckV completeness	90.36% (High-quality)
CDS count	42
CDS density	95.40%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	201	Host agreement	94.53
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1522121_1	phrog_199	56.0	4.4e-16	holin	lysis
UniRef90	UHGV-1522121_1	UniRef90_R5AT18	263.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1522121_1	742738.HMPREF9460_01388	148.0	1.54143e-43	Bacteriophage holin family	N/A
Pfam	UHGV-1522121_1	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
COG	UHGV-1522121_1	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
KOfam	UHGV-1522121_2	K01447	88.8	8.3e-26	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1522121_2	phrog_5182	149.8	2.38221e-44	endolysin	lysis
UniRef90	UHGV-1522121_2	UniRef90_R5AZE6	289.0	0	N-acetylmuramoyl-L-alanine amidase family 2	N/A
eggNOG-mapper	UHGV-1522121_2	397288.C806_00777	201.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
Pfam	UHGV-1522121_2	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-1522121_2	PF00395	N/A	N/A	S-layer homology domain	SLH
COG	UHGV-1522121_2	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1522121_2	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-1522121_3	K20846	63.9	1.4e-18	cgkA; kappa-carrageenase [EC:3.2.1.83]	N/A
PHROG	UHGV-1522121_3	phrog_215	86.7	4.7e-25	structural protein with Ig domain	head and packaging
eggNOG-mapper	UHGV-1522121_3	203275.BFO_0575	82.0	0.000000000000209	Bacterial group 2 Ig-like protein	N/A
Pfam	UHGV-1522121_3	PF02368	N/A	N/A	Bacterial Ig-like domain (group 2)	Big_2
COG	UHGV-1522121_3	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1522121_3	PF02368,PF09423,MF_00575,NF003743,NF005261,COG5492	N/A	N/A	N/A	N/A
KOfam	UHGV-1522121_4	K07603	50.7	0.000000000000011	COL17A, BP180; collagen type XVII alpha	N/A
PHROG	UHGV-1522121_4	phrog_6320	61.1	1.2e-17	tail fiber protein	tail
Pfam	UHGV-1522121_4	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
structural_annotation	UHGV-1522121_4	PF20622	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_5	phrog_6616	61.6	2.2e-18	tail protein	tail
structural_annotation	UHGV-1522121_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_7	phrog_1535	115.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1522121_7	UniRef90_A0A810PX76	114.0	1.28e-22	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1522121_7	1449050.JNLE01000003_gene3881	144.0	5.2e-33	domain protein	N/A
COG	UHGV-1522121_7	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1522121_7	PF16789,TIGR02473	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_8	phrog_706	109.6	2.6e-32	N/A	unknown function
UniRef90	UHGV-1522121_8	UniRef90_UPI00164D7633	176.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1522121_8	693746.OBV_18170	169.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1522121_8	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1522121_8	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_9	phrog_11299	98.3	7.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-1522121_9	1449050.JNLE01000003_gene3883	67.4	0.00000000000375	N/A	N/A
structural_annotation	UHGV-1522121_9	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_10	phrog_3099	87.5	1.6e-25	N/A	unknown function
eggNOG-mapper	UHGV-1522121_10	693746.OBV_18150	223.0	0	N/A	N/A
structural_annotation	UHGV-1522121_10	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_11	phrog_3266	66.1	4.6e-19	tail completion	connector
eggNOG-mapper	UHGV-1522121_11	476272.RUMHYD_01781	124.0	8.42e-34	N/A	N/A
structural_annotation	UHGV-1522121_11	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_12	phrog_556	60.3	6.1e-18	minor head protein	head and packaging
UniRef90	UHGV-1522121_12	UniRef90_A0A1H7MNM8	115.0	4.6e-30	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1522121_12	476272.RUMHYD_01780	116.0	2.98e-31	N/A	N/A
Pfam	UHGV-1522121_12	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1522121_12	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_13	phrog_3366	52.9	0.000000000000007	N/A	unknown function
structural_annotation	UHGV-1522121_13	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_14	phrog_541	67.3	2.1e-19	head-tail adaptor	connector
eggNOG-mapper	UHGV-1522121_14	33035.JPJF01000106_gene3131	76.3	0.00000000000000192	N/A	N/A
PHROG	UHGV-1522121_15	phrog_267	54.8	0.0000000000000014	major head protein	head and packaging
eggNOG-mapper	UHGV-1522121_15	1235799.C818_04223	157.0	1.1911e-43	N/A	N/A
structural_annotation	UHGV-1522121_15	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_16	phrog_194	44.8	0.0000000000022	head scaffolding protein	head and packaging
UniRef90	UHGV-1522121_16	UniRef90_UPI001C0EBA51	128.0	1.7e-33	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-1522121_16	1539298.JO41_08210	63.2	0.000000000913	Phage minor structural protein GP20	N/A
Pfam	UHGV-1522121_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1522121_16	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_17	phrog_581	242.7	0	minor head protein	head and packaging
UniRef90	UHGV-1522121_17	UniRef90_A0A355KVT5	338.0	0	Phage capsid protein (Fragment)	N/A
eggNOG-mapper	UHGV-1522121_17	476272.RUMHYD_01761	227.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1522121_17	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1522121_17	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1522121_17	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_18	phrog_533	213.8	0	portal protein	head and packaging
UniRef90	UHGV-1522121_18	UniRef90_A0A173TY48	345.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1522121_18	33035.JPJF01000106_gene3135	327.0	0	phage minor capsid protein	N/A
structural_annotation	UHGV-1522121_18	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_19	phrog_1233	95.2	7.5e-28	N/A	unknown function
eggNOG-mapper	UHGV-1522121_19	1415774.U728_832	92.8	5.28e-23	N/A	N/A
structural_annotation	UHGV-1522121_19	PF13058	N/A	N/A	N/A	N/A
KOfam	UHGV-1522121_20	K06909	396.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1522121_20	phrog_5653	148.3	2.38221e-44	terminase large subunit	head and packaging
UniRef90	UHGV-1522121_20	UniRef90_A0A416S378	634.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1522121_20	33035.JPJF01000106_gene3136	596.0	0	Terminase small subunit	N/A
Pfam	UHGV-1522121_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
Pfam	UHGV-1522121_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1522121_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1522121_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1522121_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1522121_20	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1522121_21	PF10922,MF_00839	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_22	phrog_36	54.6	0.0000000000000023	transcriptional regulator	transcription regulation
UniRef90	UHGV-1522121_22	UniRef90_UPI001D0837DD	123.0	2.36e-33	N/A	N/A
eggNOG-mapper	UHGV-1522121_22	411468.CLOSCI_00221	51.2	0.00000512	N/A	N/A
Pfam	UHGV-1522121_22	PF07374	N/A	N/A	N/A	DUF1492
structural_annotation	UHGV-1522121_22	PF07374,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1522121_24	K01160	51.0	0.000000000000041	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1522121_24	phrog_140	86.6	3.3e-25	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1522121_24	UniRef90_R6ING7	157.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-1522121_24	1262914.BN533_01944	157.0	0	crossover junction endodeoxyribonuclease	N/A
Pfam	UHGV-1522121_24	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-1522121_24	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1522121_24	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-1522121_25	K07505	416.2	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-1522121_25	phrog_2597	1168.0	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1522121_25	UniRef90_A0A1E3C4V4	1016.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-1522121_25	1232449.BAHV02000008_gene621	998.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-1522121_25	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-1522121_25	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-1522121_25	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-1522121_25	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-1522121_26	K17677	348.5	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-1522121_26	phrog_16	275.1	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1522121_26	UniRef90_A0A391NZY2	825.0	0	Putative DEAD box family helicase, phage associated	N/A
eggNOG-mapper	UHGV-1522121_26	394503.Ccel_3307	820.0	0	helicase	N/A
PADLOC	UHGV-1522121_26	mREase_IV_00005	132.9	2.8e-39	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1522121_26	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1522121_26	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1522121_26	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1522121_26	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_27	phrog_2698	184.0	0	N/A	unknown function
UniRef90	UHGV-1522121_27	UniRef90_UPI001412B858	161.0	0	N/A	N/A
eggNOG-mapper	UHGV-1522121_27	394503.Ccel_3308	156.0	0	N/A	N/A
structural_annotation	UHGV-1522121_27	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_28	phrog_124	232.0	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1522121_28	UniRef90_A0A7C6K8G1	378.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-1522121_28	999413.HMPREF1094_00235	373.0	0	AAA domain	N/A
Pfam	UHGV-1522121_28	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-1522121_28	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-1522121_29	K03546	72.7	4.4e-21	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-1522121_29	phrog_1499	468.0	0	N/A	unknown function
UniRef90	UHGV-1522121_29	UniRef90_A0A3E0QS83	527.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-1522121_29	645991.Sgly_0320	512.0	0	domain protein	N/A
Pfam	UHGV-1522121_29	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-1522121_29	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1522121_29	TIGR03185,COG5293	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_30	phrog_3777	42.9	0.0000000000054	N/A	unknown function
UniRef90	UHGV-1522121_30	UniRef90_UPI0019572B07	66.2	0.0000000000043	N/A	N/A
Pfam	UHGV-1522121_30	PF12957	N/A	N/A	N/A	DUF3846
COG	UHGV-1522121_30	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
structural_annotation	UHGV-1522121_30	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_31	phrog_474	117.8	1.4e-34	phosphofructokinase	other
UniRef90	UHGV-1522121_31	UniRef90_A0A7V6W4J9	115.0	1.48e-30	N/A	N/A
eggNOG-mapper	UHGV-1522121_31	665956.HMPREF1032_00639	112.0	2.54e-30	N/A	N/A
Pfam	UHGV-1522121_31	PF19905	N/A	N/A	N/A	DUF6378
structural_annotation	UHGV-1522121_31	PF19905	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_34	phrog_424	105.7	4.7e-31	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1522121_34	UniRef90_UPI001EDF1E9D	402.0	0	phosphoadenosine phosphosulfate reductase family protein	N/A
eggNOG-mapper	UHGV-1522121_34	1378168.N510_03014	349.0	0	N/A	N/A
PADLOC	UHGV-1522121_34	SspD_00001	68.1	2.7e-19	SspD	SSP
Pfam	UHGV-1522121_34	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-1522121_34	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1522121_34	PF01507,MF_00063,NF005316,COG0175	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_35	phrog_38832	44.1	2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1522121_35	665956.HMPREF1032_03087	121.0	1.65e-33	N/A	N/A
structural_annotation	UHGV-1522121_35	PF11717,TIGR02450	N/A	N/A	N/A	N/A
PHROG	UHGV-1522121_40	phrog_38679	58.4	1.2e-16	N/A	unknown function
UniRef90	UHGV-1522121_42	UniRef90_A0A2U1BEG8	102.0	7.31e-26	Helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-1522121_42	445972.ANACOL_03315	91.7	1.26e-22	N/A	N/A
COG	UHGV-1522121_42	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1522121	Yes	31,478	57	90	1
UHGV-1535214	No	30,959	57	89	1
UHGV-0138661	No	30,522	57	88	1
UHGV-0075891	No	11,531	56	33	1