vOTU vOTU-068793

vOTU: vOTU-068793

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-068793
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00074 → vSUBFAM-01638 → vGENUS-09241 → vSUBGEN-10531 → vOTU-068793
Host lineage	Bacteria → Firmicutes_A
Host range breadth	Phylum
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1334159
Biosample ID	N/A
Genome length (bp)	36,263 bps
CheckV completeness	97.79% (High-quality)
CDS count	59
CDS density	91.95%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A	Total connections	3	Host agreement	66.67

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.79)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1334159_1	UniRef90_UPI0016510896	103.0	6.5e-26	N/A	N/A
PHROG	UHGV-1334159_2	phrog_3136	76.4	3.5e-22	N/A	unknown function
structural_annotation	UHGV-1334159_2	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_3	phrog_23392	47.4	0.00000000000034	N/A	unknown function
eggNOG-mapper	UHGV-1334159_5	397291.C804_00971	58.2	0.0000000131	N/A	N/A
Pfam	UHGV-1334159_8	PF13240	N/A	N/A	zinc-ribbon domain	zinc_ribbon_2
KOfam	UHGV-1334159_10	K03111	142.6	4.49957e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1334159_10	phrog_44	142.7	2.29953e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334159_10	UniRef90_A0A2V2ET76	148.0	1.68156e-43	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1334159_10	768710.DesyoDRAFT_5235	112.0	2.4e-30	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-1334159_10	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1334159_10	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1334159_10	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1334159_10	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1334159_10	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_11	phrog_9298	320.6	0	radical SAM domain protein	other
UniRef90	UHGV-1334159_11	UniRef90_UPI0019113502	536.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-1334159_11	97138.C820_02863	343.0	0	N/A	N/A
COG	UHGV-1334159_11	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1334159_11	MF_01864,NF010916,COG2516	N/A	N/A	N/A	N/A
KOfam	UHGV-1334159_12	K00558	215.0	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1334159_12	phrog_116	259.3	0	DNA methyltransferase	other
UniRef90	UHGV-1334159_12	UniRef90_UPI00164A64BC	363.0	0	DNA cytosine methyltransferase	N/A
eggNOG-mapper	UHGV-1334159_12	445972.ANACOL_03332	338.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-1334159_12	oMTase_00004	296.2	0	orphan methyltransferase	RM
Pfam	UHGV-1334159_12	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1334159_12	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1334159_12	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1334159_12	PF00145,MF_00786,TIGR00675,COG0270	N/A	N/A	N/A	N/A
KOfam	UHGV-1334159_13	K02315	125.7	4.4e-37	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-1334159_13	phrog_50	115.8	4.5e-34	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334159_13	UniRef90_F7V9D6	135.0	1.26e-34	Putative DnaC	N/A
eggNOG-mapper	UHGV-1334159_13	508419.F8J195_9CAUD	134.0	5.86e-35	IstB-like ATP binding protein	N/A
Pfam	UHGV-1334159_13	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
structural_annotation	UHGV-1334159_13	PF01695,MF_01919,NF005992,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_14	phrog_16304	94.9	1e-27	N/A	unknown function
eggNOG-mapper	UHGV-1334159_14	1227266.HMPREF1551_00549	93.6	5.99e-20	N/A	N/A
Pfam	UHGV-1334159_14	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1334159_14	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-1334159_15	K01160	42.8	0.000000000014	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-1334159_15	phrog_1682	69.3	7e-20	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334159_15	UniRef90_R7FGZ0	111.0	3.02e-29	Gp63	N/A
eggNOG-mapper	UHGV-1334159_15	997350.HMPREF9129_1668	89.0	4.53e-21	Endonuclease that resolves Holliday junction intermediates made during homologous genetic recombination and DNA repair. Exhibits sequence and structure-selective cleavage of four-way DNA junctions, where it introduces symmetrical nicks in two strands of the same polarity at the 5' side of dinucleotides. Corrects the defects in genetic recombination and DNA repair associated with inactivation of ruvAB or ruvC	N/A
COG	UHGV-1334159_15	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-1334159_15	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_16	phrog_155	145.2	3.89561e-43	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1334159_16	UniRef90_UPI001CF7F8A4	181.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-1334159_16	386415.NT01CX_2192	169.0	0	ERF superfamily	N/A
Pfam	UHGV-1334159_16	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-1334159_16	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
UniRef90	UHGV-1334159_18	UniRef90_A0A2Z4GUH8	85.5	1.45e-17	Histone H2A type 1-B/E-like protein	N/A
KOfam	UHGV-1334159_25	K22300	48.3	0.00000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1334159_25	phrog_8	58.1	2.5e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-1334159_25	UniRef90_UPI001F356AD3	63.9	0.00000000000293	helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1334159_25	755731.Clo1100_0530	57.4	0.000000000622	transcriptional regulator	N/A
Pfam	UHGV-1334159_25	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1334159_25	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-1334159_26	K01356	158.5	0	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-1334159_26	phrog_4	127.6	1.3e-37	transcriptional repressor	transcription regulation
UniRef90	UHGV-1334159_26	UniRef90_UPI0013015C96	150.0	3.29025e-42	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1334159_26	879308.HMPREF9130_0437	132.0	7.63e-36	Represses a number of genes involved in the response to DNA damage (SOS response)	N/A
Pfam	UHGV-1334159_26	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-1334159_26	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-1334159_26	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1334159_26	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_27	phrog_9605	378.5	0	N/A	unknown function
UniRef90	UHGV-1334159_27	UniRef90_UPI00196A00C3	404.0	0	N/A	N/A
eggNOG-mapper	UHGV-1334159_27	877418.ATWV01000007_gene2291	371.0	0	N/A	N/A
Pfam	UHGV-1334159_27	PF12358	N/A	N/A	N/A	DUF3644
Pfam	UHGV-1334159_27	PF18740	N/A	N/A	EC042_2821-like Restriction Endonuclease-like domain	EC042_2821
structural_annotation	UHGV-1334159_27	PF12358,COG1895	N/A	N/A	N/A	N/A
KOfam	UHGV-1334159_28	K14059	174.5	0	int; integrase	N/A
PHROG	UHGV-1334159_28	phrog_1	169.5	0	integrase	integration and excision
UniRef90	UHGV-1334159_28	UniRef90_A0A353EXX9	481.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1334159_28	1304866.K413DRAFT_0804	142.0	3.36e-36	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1334159_28	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1334159_28	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1334159_28	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-1334159_34	UniRef90_A0A3E2B3T2	78.2	1.94e-16	N/A	N/A
UniRef90	UHGV-1334159_38	UniRef90_A0A4Q2K8X2	93.6	2.12e-23	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1334159_38	679200.HMPREF9333_01455	58.9	0.000000000148	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1334159_38	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1334159_38	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1334159_38	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1334159_40	K18843	52.7	0.000000000000011	hicB; antitoxin HicB	N/A
PHROG	UHGV-1334159_40	phrog_9151	41.8	0.000000000013	HicB-like antitoxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1334159_40	UniRef90_A0A7X3DIU0	105.0	1.6e-25	Type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-1334159_40	658086.HMPREF0994_04478	98.6	3.93e-24	HicB family	N/A
Pfam	UHGV-1334159_40	PF05534	N/A	N/A	HicB family	HicB
COG	UHGV-1334159_40	COG1598	N/A	N/A	Antitoxin component HicB of the HicAB toxin-antitoxin system	N/A
UniRef90	UHGV-1334159_41	UniRef90_A0A4P9UXL9	51.2	0.00000125	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-1334159_41	233412.HD_0911	49.3	0.00000111	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-1334159_41	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
structural_annotation	UHGV-1334159_41	COG1724	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1334159_43	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
UniRef90	UHGV-1334159_44	UniRef90_A0A3G3GV91	53.1	0.000000747	Addiction module killer protein	N/A
COG	UHGV-1334159_44	COG3549	N/A	N/A	Plasmid maintenance system killer protein	N/A
structural_annotation	UHGV-1334159_44	PF05015,TIGR00053,COG4115	N/A	N/A	N/A	N/A
KOfam	UHGV-1334159_45	K21498	89.8	6.2e-26	higA-1; antitoxin HigA-1	N/A
PHROG	UHGV-1334159_45	phrog_1381	58.2	1.5e-16	plasmid antitoxin with HTH domain	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1334159_45	UniRef90_A0A1V6B8I0	95.1	4.64e-23	Putative HTH-type transcriptional regulator YbaQ	N/A
eggNOG-mapper	UHGV-1334159_45	1035193.HMPREF9073_02908	87.8	1.64e-20	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1334159_45	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
NCBIFam	UHGV-1334159_45	TIGR02607.1	N/A	N/A	HigA family addiction module antitoxin	N/A
COG	UHGV-1334159_45	COG3093	N/A	N/A	Plasmid maintenance system antidote protein VapI, contains XRE-type HTH domain	N/A
PHROG	UHGV-1334159_51	phrog_477	47.5	0.00000000000026	head-tail adaptor Ad1	connector
eggNOG-mapper	UHGV-1334159_51	632518.Calow_0834	59.3	0.00000000887	N/A	N/A
Pfam	UHGV-1334159_51	PF20557	N/A	N/A	Putative DnaT-like ssDNA binding protein	DnaT_2
structural_annotation	UHGV-1334159_51	PF20557	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_52	phrog_1378	74.6	1.1e-21	N/A	unknown function
eggNOG-mapper	UHGV-1334159_52	1295642.H839_08314	52.4	0.0000000451	N/A	N/A
PHROG	UHGV-1334159_53	phrog_422	286.0	0	major head protein	head and packaging
UniRef90	UHGV-1334159_53	UniRef90_A0A3C2DU69	353.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1334159_53	545697.HMPREF0216_02849	358.0	0	N/A	N/A
structural_annotation	UHGV-1334159_53	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_54	phrog_194	43.5	0.0000000000064	head scaffolding protein	head and packaging
PHROG	UHGV-1334159_56	phrog_4611	91.8	1.9e-27	minor head protein	head and packaging
UniRef90	UHGV-1334159_56	UniRef90_W0U9J3	122.0	5.13e-26	Phage minor capsid protein (Glycoside Hydrolase Family 25 protein )	N/A
eggNOG-mapper	UHGV-1334159_56	1160721.RBI_II00541	122.0	8.6e-27	N/A	N/A
Pfam	UHGV-1334159_56	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1334159_56	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1334159_56	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-1334159_57	phrog_64	52.6	0.0000000000000029	portal protein	head and packaging
UniRef90	UHGV-1334159_57	UniRef90_A0A1V5S9S5	210.0	0	Phage portal protein, SPP1 Gp6-like	N/A
eggNOG-mapper	UHGV-1334159_57	86416.Clopa_2538	203.0	0	PFAM Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1334159_57	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1334159_57	PF05133,MF_04120,TIGR01542,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1334159_58	K06909	115.9	5.3e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1334159_58	phrog_5653	116.1	2.3e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1334159_58	UniRef90_V6IXM0	387.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1334159_58	1395513.P343_07995	387.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1334159_58	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
NCBIFam	UHGV-1334159_58	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1334159_58	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1334159_58	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1334159	Yes	36,263	42	98	1