vOTU vOTU-069103

vOTU: vOTU-069103

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-069103
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Erysipelatoclostridium → Erysipelatoclostridium ramosum
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01317 → vGENUS-01472 → vSUBGEN-31973 → vOTU-069103
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Erysipelatoclostridium → Erysipelatoclostridium ramosum
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2010330
Biosample ID	SAMEA2579962
Genome length (bp)	36,519 bps
CheckV completeness	99.90% (High-quality)
CDS count	66
CDS density	92.25%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Erysipelatoclostridium → Erysipelatoclostridium ramosum	Total connections	646	Host agreement	93.34
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Erysipelatoclostridium → Erysipelatoclostridium ramosum	Total connections	47	Host agreement	91.49

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2010330_3	phrog_373	130.5	1.4e-38	anti-repressor	transcription regulation
UniRef90	UHGV-2010330_3	UniRef90_UPI001D093EF2	407.0	0	ORF6C domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_3	1232446.BAIE02000011_gene1630	395.0	0	ORF6C domain	N/A
Pfam	UHGV-2010330_3	PF10543	N/A	N/A	ORF6N domain	ORF6N
Pfam	UHGV-2010330_3	PF10552	N/A	N/A	ORF6C domain	ORF6C
COG	UHGV-2010330_3	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-2010330_3	PF10552,PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_5	phrog_585	90.7	1.5e-26	N/A	unknown function
UniRef90	UHGV-2010330_5	UniRef90_UPI000E471944	255.0	0	N/A	N/A
eggNOG-mapper	UHGV-2010330_5	1159488.SEQMU2_04590	66.6	0.00000000000264	N/A	N/A
Pfam	UHGV-2010330_5	PF10711	N/A	N/A	N/A	DUF2513
structural_annotation	UHGV-2010330_5	PF10711,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_9	phrog_7445	43.1	0.0000000000012	N/A	unknown function
UniRef90	UHGV-2010330_9	UniRef90_UPI001C2C3882	283.0	0	Cas9 inhibitor AcrIIA9 family protein	N/A
eggNOG-mapper	UHGV-2010330_9	1122989.KB898582_gene1853	58.9	0.00000000809	PcfK-like protein	N/A
Pfam	UHGV-2010330_9	PF14058	N/A	N/A	PcfK-like protein	PcfK
PHROG	UHGV-2010330_10	phrog_8470	157.0	0	N/A	unknown function
UniRef90	UHGV-2010330_10	UniRef90_UPI000E4E20B7	931.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_10	1232446.BAIE02000011_gene1624	927.0	0	PcfJ-like protein	N/A
Pfam	UHGV-2010330_10	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-2010330_10	PF14284,NF008072	N/A	N/A	N/A	N/A
KOfam	UHGV-2010330_14	K04763	77.1	2.8e-22	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-2010330_14	phrog_216	123.2	1.6e-36	integrase	integration and excision
UniRef90	UHGV-2010330_14	UniRef90_G9R0Z2	458.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_14	1232446.BAIE02000002_gene805	443.0	0	Integrase	N/A
Pfam	UHGV-2010330_14	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2010330_14	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2010330_14	PF00589,MF_02055,NF040815,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_16	phrog_5051	52.1	0.000000000000014	N/A	unknown function
eggNOG-mapper	UHGV-2010330_19	1232446.BAIE02000002_gene811	325.0	0	N/A	N/A
UniRef90	UHGV-2010330_21	UniRef90_A0A7U9CJ41	328.0	0	Phosphagen kinase N-terminal domain-containing protein	N/A
PHROG	UHGV-2010330_23	phrog_2245	92.2	5.5e-27	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-2010330_23	UniRef90_A0A4U9RLZ8	76.6	2.61e-16	N/A	N/A
eggNOG-mapper	UHGV-2010330_23	1232446.BAIE02000002_gene815	172.0	0	N/A	N/A
structural_annotation	UHGV-2010330_23	PF12643,MF_01020,TIGR03188	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_24	phrog_270	115.3	6e-34	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2010330_24	UniRef90_UPI000497F8A6	445.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_24	1232446.BAIE02000002_gene816	445.0	0	N/A	N/A
Pfam	UHGV-2010330_24	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
structural_annotation	UHGV-2010330_24	PF01978,MF_01909,TIGR04176,COG3355	N/A	N/A	N/A	N/A
KOfam	UHGV-2010330_25	K02314	167.3	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-2010330_25	phrog_19	177.2	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2010330_25	UniRef90_G9R103	753.0	0	SF4 helicase domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_25	1232446.BAIE02000002_gene817	771.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-2010330_25	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-2010330_25	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-2010330_25	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2010330_27	PF04545,PF01920,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_28	phrog_119	69.0	6.3e-20	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-2010330_28	UniRef90_A0A3E3ADS4	224.0	0	HNH endonuclease	N/A
eggNOG-mapper	UHGV-2010330_28	1232446.BAIE02000002_gene820	224.0	0	HNH nucleases	N/A
COG	UHGV-2010330_28	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-2010330_30	phrog_361	96.7	1.9e-28	terminase small subunit	head and packaging
UniRef90	UHGV-2010330_30	UniRef90_A0A3E3ADK1	255.0	0	Terminase	N/A
eggNOG-mapper	UHGV-2010330_30	1232446.BAIE02000002_gene822	255.0	0	Phage terminase, small subunit	N/A
Pfam	UHGV-2010330_30	PF05119	N/A	N/A	Phage terminase, small subunit	Terminase_4
structural_annotation	UHGV-2010330_30	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_31	phrog_9	307.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-2010330_31	UniRef90_A0A3E3ADF9	1181.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-2010330_31	1232446.BAIE02000002_gene823	1182.0	0	Phage Terminase	N/A
Pfam	UHGV-2010330_31	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-2010330_31	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-2010330_31	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-2010330_31	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_32	phrog_12	165.9	0	portal protein	head and packaging
UniRef90	UHGV-2010330_32	UniRef90_A0A3E3AEZ3	787.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2010330_32	1232446.BAIE02000002_gene824	796.0	0	Phage portal protein, HK97 family	N/A
Pfam	UHGV-2010330_32	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-2010330_32	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-2010330_32	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-2010330_32	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-2010330_33	K06904	147.4	1.30321e-43	N/A	N/A
PHROG	UHGV-2010330_33	phrog_80	177.4	0	head maturation protease	head and packaging
UniRef90	UHGV-2010330_33	UniRef90_A0A3E3AEE5	390.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-2010330_33	1232446.BAIE02000002_gene825	385.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-2010330_33	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-2010330_33	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-2010330_33	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-2010330_33	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_34	phrog_10	203.5	0	major head protein	head and packaging
UniRef90	UHGV-2010330_34	UniRef90_A0A3E3ACQ3	807.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-2010330_34	1232446.BAIE02000002_gene826	808.0	0	phage major capsid protein, HK97 family	N/A
Pfam	UHGV-2010330_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-2010330_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-2010330_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-2010330_34	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_35	phrog_2550	84.7	5.1e-25	N/A	unknown function
UniRef90	UHGV-2010330_35	UniRef90_R5V091	55.8	0.0000000311	Phage related protein	N/A
eggNOG-mapper	UHGV-2010330_35	1232446.BAIE02000002_gene827	172.0	0	N/A	N/A
NCBIFam	UHGV-2010330_35	TIGR01560.2	N/A	N/A	head-tail connector protein	N/A
structural_annotation	UHGV-2010330_35	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_36	phrog_19734	113.3	1.6e-33	N/A	unknown function
UniRef90	UHGV-2010330_36	UniRef90_A0A3E3ACV2	228.0	0	Head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-2010330_36	1232446.BAIE02000002_gene828	228.0	0	N/A	N/A
structural_annotation	UHGV-2010330_36	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_37	phrog_78	48.1	0.00000000000021	tail terminator	connector
eggNOG-mapper	UHGV-2010330_37	1232446.BAIE02000002_gene829	214.0	0	N/A	N/A
structural_annotation	UHGV-2010330_37	PF05657	N/A	N/A	N/A	N/A
UniRef90	UHGV-2010330_38	UniRef90_R6UNR2	127.0	2.72e-34	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-2010330_38	1232446.BAIE02000002_gene830	304.0	0	N/A	N/A
structural_annotation	UHGV-2010330_38	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_39	phrog_88	71.6	1.1e-20	major tail protein	tail
UniRef90	UHGV-2010330_39	UniRef90_A0A3E3ACS6	400.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2010330_39	33035.JPJF01000039_gene278	162.0	0	N/A	N/A
NCBIFam	UHGV-2010330_39	TIGR01603.1	N/A	N/A	major tail protein	N/A
structural_annotation	UHGV-2010330_39	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2010330_40	1235798.C817_04591	55.8	0.0000000689	N/A	N/A
PHROG	UHGV-2010330_42	phrog_23464	215.0	0	N/A	unknown function
eggNOG-mapper	UHGV-2010330_42	1232446.BAIE02000002_gene834	781.0	0	tape measure	N/A
COG	UHGV-2010330_42	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-2010330_42	PF20155	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_43	phrog_33	62.5	1.1e-17	distal tail protein Dit	tail
UniRef90	UHGV-2010330_43	UniRef90_A0A3E3AF06	479.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-2010330_43	1232446.BAIE02000002_gene835	478.0	0	phage tail	N/A
COG	UHGV-2010330_43	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-2010330_43	PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_44	phrog_13289	359.7	0	tail protein	tail
UniRef90	UHGV-2010330_44	UniRef90_A0A3E3AEF9	1309.0	0	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_44	1232446.BAIE02000002_gene836	1309.0	0	Phage minor structural protein	N/A
Pfam	UHGV-2010330_44	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
Pfam	UHGV-2010330_44	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
NCBIFam	UHGV-2010330_44	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-2010330_44	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2010330_44	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2010330_45	999413.HMPREF1094_01998	83.6	1.69e-16	N/A	N/A
KOfam	UHGV-2010330_46	K01361	61.7	2.1e-27	E3.4.21.96; lactocepin [EC:3.4.21.96]	N/A
PHROG	UHGV-2010330_46	phrog_11157	243.2	0	N/A	unknown function
UniRef90	UHGV-2010330_46	UniRef90_G9R125	546.0	0	Big_13 domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_46	1232446.BAIE02000011_gene1582	550.0	0	N/A	N/A
Pfam	UHGV-2010330_46	PF09136	N/A	N/A	Glucodextranase, domain B	Glucodextran_B
COG	UHGV-2010330_46	COG3292	N/A	N/A	Periplasmic ligand-binding sensor domain	N/A
structural_annotation	UHGV-2010330_46	PF09136,PF13205,PF13754,MF_04116,NF032891,COG2372,COG5456	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_47	phrog_32322	70.9	1.4e-20	N/A	unknown function
UniRef90	UHGV-2010330_47	UniRef90_G9R126	192.0	0	Ig-like_bact domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_47	1232446.BAIE02000011_gene1581	197.0	0	N/A	N/A
Pfam	UHGV-2010330_47	PF13754	N/A	N/A	N/A	Big_3_4
structural_annotation	UHGV-2010330_47	PF13754	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2010330_48	411461.DORFOR_01184	55.8	0.00000000464	N/A	N/A
structural_annotation	UHGV-2010330_48	PF07703,TIGR02657,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_51	phrog_24267	76.2	4.1e-22	N/A	unknown function
UniRef90	UHGV-2010330_51	UniRef90_A0A173T301	92.8	3.7e-20	Phage-related holin (Lysis protein)	N/A
eggNOG-mapper	UHGV-2010330_51	658655.HMPREF0988_00525	109.0	7.53e-26	the current gene model (or a revised gene model) may contain a frame shift	N/A
COG	UHGV-2010330_51	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-2010330_51	COG4675	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2010330_56	1230342.CTM_17037	88.6	8.98e-19	Siphovirus ReqiPepy6 Gp37-like protein	N/A
PHROG	UHGV-2010330_57	phrog_1129	74.2	1.2e-21	holin	lysis
UniRef90	UHGV-2010330_57	UniRef90_A0A0J8Z1S7	150.0	1.4013e-45	Holin protein	N/A
eggNOG-mapper	UHGV-2010330_57	1123075.AUDP01000020_gene1532	104.0	3.61e-28	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-2010330_57	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-2010330_57	PF06946	N/A	N/A	N/A	N/A
PHROG	UHGV-2010330_58	phrog_4105	89.3	2e-27	N/A	unknown function
eggNOG-mapper	UHGV-2010330_58	1121105.ATXL01000027_gene760	75.1	0.00000000000000149	N/A	N/A
KOfam	UHGV-2010330_59	K01447	95.8	5.7e-28	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-2010330_59	phrog_1794	183.0	0	amidase	lysis
UniRef90	UHGV-2010330_59	UniRef90_A0A3E3E9Q5	717.0	0	N-acetylmuramoyl-L-alanine amidase domain-containing protein	N/A
eggNOG-mapper	UHGV-2010330_59	1286171.EAL2_c06030	185.0	0	n-acetylmuramoyl-l-alanine amidase	N/A
Pfam	UHGV-2010330_59	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
Pfam	UHGV-2010330_59	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-2010330_59	COG5632	N/A	N/A	N-acetylmuramoyl-L-alanine amidase CwlA	N/A
structural_annotation	UHGV-2010330_59	PF01510,PF18342,MF_04111,NF008758,NF040670,COG5632	N/A	N/A	N/A	N/A
KOfam	UHGV-2010330_61	K14059	128.0	1.3e-37	int; integrase	N/A
PHROG	UHGV-2010330_61	phrog_1	138.4	6.89999e-41	integrase	integration and excision
UniRef90	UHGV-2010330_61	UniRef90_UPI000E4D01BB	607.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-2010330_61	1232446.BAIE02000002_gene793	116.0	3.64e-27	Phage integrase family	N/A
Pfam	UHGV-2010330_61	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2010330_61	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-2010330_61	PF00589,PF02899,MF_01807,TIGR02224,COG4974	N/A	N/A	N/A	N/A
UniRef90	UHGV-2010330_64	UniRef90_UPI00067F15F5	66.2	0.00000000000111	helix-turn-helix domain-containing protein	N/A
structural_annotation	UHGV-2010330_64	PF13560,TIGR02612,COG1396	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2010330	Yes	36,519	34	100	1
UHGV-0072405	No	37,102	34	100	1
UHGV-0039158	No	27,629	34	77	1
UHGV-2092497	No	15,901	37	45	1