vOTU vOTU-069176

vOTU: vOTU-069176

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-069176
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00486 → vGENUS-05687 → vSUBGEN-36160 → vOTU-069176
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900555735
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0020841
Biosample ID	N/A
Genome length (bp)	39,379 bps
CheckV completeness	99.90% (High-quality)
CDS count	44
CDS density	94.16%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	2	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900555735	Total connections	9	Host agreement	77.78

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0020841_4	PF15591,MF_01549,NF007981	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020841_5	693746.OBV_21850	51.6	0.0000000556	N/A	N/A
eggNOG-mapper	UHGV-0020841_7	1163671.JAGI01000002_gene3923	50.1	0.000000258	N/A	N/A
Pfam	UHGV-0020841_7	PF05043	N/A	N/A	Mga helix-turn-helix domain	Mga
structural_annotation	UHGV-0020841_7	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0020841_8	K22300	67.8	2.1e-19	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0020841_8	phrog_8	68.4	1.5e-19	transcriptional regulator	transcription regulation
UniRef90	UHGV-0020841_8	UniRef90_A0A3D4D7M3	155.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020841_8	683837.lse_1630	92.8	7.2e-23	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0020841_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0020841_8	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0020841_8	PF13560,MF_00535,NF007257,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0020841_9	K06400	320.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0020841_9	phrog_95	320.4	0	integrase	integration and excision
UniRef90	UHGV-0020841_9	UniRef90_G4KP73	638.0	0	Putative site-specific recombinase	N/A
eggNOG-mapper	UHGV-0020841_9	693746.OBV_21880	638.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0020841_9	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0020841_9	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0020841_9	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0020841_9	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0020841_9	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
KOfam	UHGV-0020841_10	K07448	50.5	0.000000000000028	mrr; restriction system protein	N/A
UniRef90	UHGV-0020841_10	UniRef90_A0A3D4D7R4	484.0	0	SWIM-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0020841_10	613026.HRAG_00842	58.2	0.000000365	Restriction endonuclease	N/A
Pfam	UHGV-0020841_10	PF04434	N/A	N/A	SWIM zinc finger	SWIM
Pfam	UHGV-0020841_10	PF04471	N/A	N/A	Restriction endonuclease	Mrr_cat
structural_annotation	UHGV-0020841_10	PF04471,MF_00722,NF002876,COG1787	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_11	phrog_13543	95.3	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0020841_11	1226322.HMPREF1545_00787	404.0	0	N/A	N/A
Pfam	UHGV-0020841_11	PF18812	N/A	N/A	phage-Barnase-EndoU-ColicinE5/D-RelE like nuclease3	PBECR3
Pfam	UHGV-0020841_11	PF18838	N/A	N/A	Large polyvalent protein associated domain 23	LPD23
Pfam	UHGV-0020841_11	PF18857	N/A	N/A	Large polyvalent protein associated domain 38	LPD38
Pfam	UHGV-0020841_12	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
PHROG	UHGV-0020841_13	phrog_1129	54.0	0.0000000000000023	holin	lysis
UniRef90	UHGV-0020841_13	UniRef90_A0A8D9PDD4	119.0	1.38e-33	Holin	N/A
eggNOG-mapper	UHGV-0020841_13	1226322.HMPREF1545_00069	87.4	8.89e-22	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0020841_13	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
PHROG	UHGV-0020841_14	phrog_443	53.1	0.0000000000000084	holin	lysis
UniRef90	UHGV-0020841_14	UniRef90_UPI0002E2AC7F	103.0	1.14e-27	holin	N/A
eggNOG-mapper	UHGV-0020841_14	1235800.C819_01425	92.4	6.34e-24	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0020841_14	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0020841_14	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_15	phrog_1863	63.1	2.4e-19	N/A	unknown function
UniRef90	UHGV-0020841_15	UniRef90_A0A8D9UH94	82.4	6.96e-19	Hemolysin	N/A
eggNOG-mapper	UHGV-0020841_15	1226322.HMPREF1545_04027	103.0	4.66e-28	N/A	N/A
KOfam	UHGV-0020841_16	K03651	66.2	5.2e-19	cpdA; 3',5'-cyclic-AMP phosphodiesterase [EC:3.1.4.53]	N/A
PHROG	UHGV-0020841_16	phrog_7158	117.3	1.2e-34	N/A	unknown function
eggNOG-mapper	UHGV-0020841_16	1151292.QEW_0668	64.7	0.0000000432	cellulose 1,4-beta-cellobiosidase activity	N/A
Pfam	UHGV-0020841_16	PF00149	N/A	N/A	Calcineurin-like phosphoesterase	Metallophos
COG	UHGV-0020841_16	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-0020841_19	phrog_17196	47.1	0.00000000000031	kinase	other
eggNOG-mapper	UHGV-0020841_19	483218.BACPEC_01141	85.9	0.0000000000000121	N/A	N/A
PHROG	UHGV-0020841_20	phrog_3287	121.6	5.1e-36	virion structural protein	head and packaging
eggNOG-mapper	UHGV-0020841_20	693746.OBV_23870	783.0	0	N/A	N/A
structural_annotation	UHGV-0020841_20	PF11134,MF_01282,TIGR03300,COG5276	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020841_21	693746.OBV_23880	158.0	1.4013e-45	N/A	N/A
structural_annotation	UHGV-0020841_21	PF20387	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_22	phrog_371	123.1	2.2e-36	major head protein	head and packaging
UniRef90	UHGV-0020841_22	UniRef90_R6TFU9	465.0	0	Mu-like_gpT domain-containing protein	N/A
eggNOG-mapper	UHGV-0020841_22	693746.OBV_23890	409.0	0	N/A	N/A
Pfam	UHGV-0020841_22	PF10124	N/A	N/A	Mu-like prophage major head subunit gpT	Mu-like_gpT
structural_annotation	UHGV-0020841_22	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_23	phrog_24113	79.4	3.1e-23	N/A	unknown function
eggNOG-mapper	UHGV-0020841_23	1226322.HMPREF1545_03847	76.3	6.97e-16	N/A	N/A
structural_annotation	UHGV-0020841_23	PF11133,COG5471	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_24	phrog_35275	84.0	1.8e-24	N/A	unknown function
eggNOG-mapper	UHGV-0020841_24	693746.OBV_23910	150.0	1.44999e-40	N/A	N/A
structural_annotation	UHGV-0020841_26	NF007241	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_27	phrog_156	237.8	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0020841_27	693746.OBV_23930	597.0	0	N/A	N/A
structural_annotation	UHGV-0020841_27	PF12236,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
KOfam	UHGV-0020841_28	K07474	88.2	1.8e-25	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0020841_28	phrog_51	86.8	2.7e-25	terminase small subunit	head and packaging
UniRef90	UHGV-0020841_28	UniRef90_G4KPV4	117.0	1.89e-30	Terminase small subunit family protein	N/A
eggNOG-mapper	UHGV-0020841_28	693746.OBV_23940	117.0	3.16e-31	DNA packaging	N/A
Pfam	UHGV-0020841_28	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0020841_28	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0020841_28	PF03592,COG3728	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0020841_29	1226322.HMPREF1545_00288	47.8	0.00000969	N/A	N/A
PHROG	UHGV-0020841_30	phrog_3584	118.1	5.5e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020841_30	1226322.HMPREF1545_03841	101.0	1.01e-22	N/A	N/A
structural_annotation	UHGV-0020841_30	PF01446,NF041486	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020841_31	NF040595	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0020841_32	PF09228	N/A	N/A	N/A	N/A
KOfam	UHGV-0020841_33	K01448	65.4	8.6e-19	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0020841_33	phrog_435	85.1	1.1e-24	endolysin	lysis
UniRef90	UHGV-0020841_33	UniRef90_R6GV68	147.0	2.76e-40	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0020841_33	428125.CLOLEP_01588	91.3	2.61e-19	N-acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0020841_33	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0020841_33	PF05036	N/A	N/A	SPOR domain	SPOR
COG	UHGV-0020841_33	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0020841_33	PF01520,MF_00562,TIGR02883,COG0860	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_34	phrog_355	58.1	9e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0020841_34	397290.C810_05229	139.0	7.61999e-40	N/A	N/A
KOfam	UHGV-0020841_35	K21523	49.5	4.3e-18	gp17; terminase, large subunit [EC:3.1.-.-]	N/A
PHROG	UHGV-0020841_35	phrog_2	102.2	7.3e-30	terminase large subunit	head and packaging
UniRef90	UHGV-0020841_35	UniRef90_R6TQ60	637.0	0	Putative terminase large subunit	N/A
eggNOG-mapper	UHGV-0020841_35	693746.OBV_23980	617.0	0	phage Terminase large subunit	N/A
COG	UHGV-0020841_35	COG4373	N/A	N/A	Mu-like prophage FluMu protein gp28	N/A
structural_annotation	UHGV-0020841_35	PF03237,PF17289,MF_04146,TIGR01547,COG4626	N/A	N/A	N/A	N/A
KOfam	UHGV-0020841_37	K07738	49.8	0.000000000000055	nrdR; transcriptional repressor NrdR	N/A
UniRef90	UHGV-0020841_37	UniRef90_A0A022LNF1	51.6	0.00000471	Transcriptional repressor NrdR	N/A
eggNOG-mapper	UHGV-0020841_37	1120956.JHZK01000007_gene2862	52.4	0.000000523	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	N/A
COG	UHGV-0020841_37	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
structural_annotation	UHGV-0020841_37	PF04606,NF007241,COG3478	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_42	phrog_15609	195.4	0	N/A	unknown function
UniRef90	UHGV-0020841_42	UniRef90_UPI001C102D5E	165.0	1.54143e-44	N/A	N/A
eggNOG-mapper	UHGV-0020841_42	693746.OBV_24000	153.0	1.43e-40	N/A	N/A
Pfam	UHGV-0020841_42	PF11300	N/A	N/A	N/A	DUF3102
COG	UHGV-0020841_42	COG2433	N/A	N/A	Possible nuclease of RNase H fold, RuvC/YqgF family	N/A
structural_annotation	UHGV-0020841_42	PF11300,NF038070	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_43	phrog_8470	265.4	0	N/A	unknown function
UniRef90	UHGV-0020841_43	UniRef90_UPI0019580896	416.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0020841_43	1226322.HMPREF1545_00100	393.0	0	PcfJ-like protein	N/A
Pfam	UHGV-0020841_43	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0020841_43	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0020841_44	phrog_36399	79.9	3.4e-23	N/A	unknown function
eggNOG-mapper	UHGV-0020841_44	1007096.BAGW01000031_gene116	84.3	8.65e-20	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0020841	Yes	39,379	60	100	1
UHGV-0007292	No	34,529	61	89	1
UHGV-0030133	No	32,769	60	85	1
UHGV-0031028	No	31,918	61	83	1
UHGV-1825312	No	15,956	61	41	1