vOTU vOTU-069586

vOTU: vOTU-069586

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-069586
Number of genomes	7
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00033 → vGENUS-02650 → vSUBGEN-05868 → vOTU-069586
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_D
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0187427
Biosample ID	SAMEA1906553
Genome length (bp)	34,446 bps
CheckV completeness	99.90% (High-quality)
CDS count	46
CDS density	92.89%
tRNA count	2
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium prausnitzii_D	Total connections	153	Host agreement	77.12
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium sp900539945	Total connections	52	Host agreement	86.54

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0187427_2	phrog_263	81.4	7e-24	holin	lysis
UniRef90	UHGV-0187427_2	UniRef90_A0A3E2UFE4	135.0	4.85001e-40	Phage holin	N/A
eggNOG-mapper	UHGV-0187427_2	748224.HMPREF9436_01413	131.0	6.38e-39	SPP1 phage holin	N/A
Pfam	UHGV-0187427_2	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-0187427_2	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-0187427_2	PF04688	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_3	phrog_4105	87.2	1.3e-25	N/A	unknown function
eggNOG-mapper	UHGV-0187427_3	657322.FPR_27220	112.0	4.37e-31	N/A	N/A
KOfam	UHGV-0187427_4	K07273	170.4	0	acm; lysozyme	N/A
PHROG	UHGV-0187427_4	phrog_291	142.1	4.69996e-42	endolysin	lysis
UniRef90	UHGV-0187427_4	UniRef90_E2ZES5	338.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0187427_4	748224.HMPREF9436_00154	338.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0187427_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0187427_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0187427_4	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_5	phrog_1382	48.0	0.000000000000085	N/A	unknown function
eggNOG-mapper	UHGV-0187427_5	457412.RSAG_01110	45.8	0.00000515	N/A	N/A
PHROG	UHGV-0187427_7	phrog_10993	281.9	0	Hoc-like head decoration	head and packaging
UniRef90	UHGV-0187427_7	UniRef90_UPI00082CBED4	252.0	0	N/A	N/A
eggNOG-mapper	UHGV-0187427_7	1121334.KB911071_gene1970	225.0	0	N/A	N/A
Pfam	UHGV-0187427_7	PF19789	N/A	N/A	N/A	DUF6273
structural_annotation	UHGV-0187427_7	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_9	phrog_18110	74.7	8.7e-22	N/A	unknown function
UniRef90	UHGV-0187427_9	UniRef90_A0A1Y3TWK1	206.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0187427_9	1280689.AUJC01000007_gene3306	89.0	2.62e-16	Phage minor structural protein	N/A
Pfam	UHGV-0187427_9	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0187427_9	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0187427_9	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-0187427_9	PF06605,PF18994,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_10	phrog_33	43.0	0.00000000001	distal tail protein Dit	tail
UniRef90	UHGV-0187427_10	UniRef90_R6N293	115.0	3.79e-28	Putative phage tail component domain protein	N/A
structural_annotation	UHGV-0187427_10	PF20753,PF20195,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_11	phrog_28775	128.2	6.1e-38	tail length tape measure protein	tail
UniRef90	UHGV-0187427_11	UniRef90_A0A844DDD5	369.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-0187427_11	1492737.FEM08_12070	138.0	3.38e-31	tape measure	N/A
Pfam	UHGV-0187427_11	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0187427_11	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0187427_11	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0187427_11	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_12	phrog_706	102.4	4.1e-30	N/A	unknown function
UniRef90	UHGV-0187427_12	UniRef90_A0A1C6B556	115.0	1.24e-28	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0187427_12	663278.Ethha_0101	94.4	2.31e-21	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0187427_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0187427_12	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187427_13	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_14	phrog_820	65.5	7.9e-19	major tail protein	tail
UniRef90	UHGV-0187427_14	UniRef90_A0A174M1L1	138.0	1.3e-37	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0187427_14	748224.HMPREF9436_03330	166.0	0	N/A	N/A
structural_annotation	UHGV-0187427_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_15	phrog_3266	100.8	8.8e-30	tail completion	connector
UniRef90	UHGV-0187427_15	UniRef90_A0A6B4JS53	58.2	0.0000000639	Chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0187427_15	718252.FP2_06620	123.0	6.8e-34	N/A	N/A
structural_annotation	UHGV-0187427_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_16	phrog_556	86.4	2.4e-25	minor head protein	head and packaging
UniRef90	UHGV-0187427_16	UniRef90_D4K441	106.0	1.25e-26	Minor capsid	N/A
eggNOG-mapper	UHGV-0187427_16	718252.FP2_06630	106.0	2.1e-27	Minor capsid protein	N/A
Pfam	UHGV-0187427_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0187427_16	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_17	phrog_3366	116.4	1.9e-34	N/A	unknown function
Pfam	UHGV-0187427_17	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0187427_17	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_18	phrog_541	70.7	2e-20	head-tail adaptor	connector
PHROG	UHGV-0187427_19	phrog_267	114.2	1.2e-33	major head protein	head and packaging
UniRef90	UHGV-0187427_19	UniRef90_A0A4P8IA69	366.0	0	Phage capsid and scaffold	N/A
eggNOG-mapper	UHGV-0187427_19	748224.HMPREF9436_03335	528.0	0	N/A	N/A
structural_annotation	UHGV-0187427_19	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_20	phrog_194	76.2	5.7e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0187427_20	UniRef90_D4K444	250.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0187427_20	748224.HMPREF9436_03336	286.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-0187427_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0187427_20	PF06810	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187427_21	PF10827	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_22	phrog_581	348.8	0	minor head protein	head and packaging
UniRef90	UHGV-0187427_22	UniRef90_A0A1C5NZK4	662.0	0	Phage minor capsid protein 2	N/A
eggNOG-mapper	UHGV-0187427_22	748224.HMPREF9436_03339	655.0	0	N/A	N/A
Pfam	UHGV-0187427_22	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0187427_22	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187427_22	PF06152,PF12106	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_23	phrog_533	269.2	0	portal protein	head and packaging
UniRef90	UHGV-0187427_23	UniRef90_A0A7G9WF85	358.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0187427_23	718252.FP2_06700	666.0	0	N/A	N/A
Pfam	UHGV-0187427_23	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0187427_23	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0187427_24	K06909	91.5	1.2e-26	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0187427_24	phrog_2	121.0	1.8e-35	terminase large subunit	head and packaging
UniRef90	UHGV-0187427_24	UniRef90_A0A844EGH8	827.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0187427_24	1449050.JNLE01000003_gene3895	409.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0187427_24	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0187427_24	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0187427_24	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_25	phrog_2412	82.5	5.3e-24	N/A	unknown function
UniRef90	UHGV-0187427_25	UniRef90_UPI000DE85101	67.0	0.0000000000166	stress-induced protein	N/A
eggNOG-mapper	UHGV-0187427_25	742738.HMPREF9460_02504	124.0	9.26e-35	N/A	N/A
PHROG	UHGV-0187427_26	phrog_36	57.0	4.2e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0187427_26	UniRef90_A0A3E2U224	117.0	3.58e-31	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0187427_26	748224.HMPREF9436_01463	220.0	0	N/A	N/A
structural_annotation	UHGV-0187427_26	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
KOfam	UHGV-0187427_27	K01160	48.0	0.00000000000035	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0187427_27	phrog_140	95.8	5e-28	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187427_27	UniRef90_UPI00122CFAB3	242.0	0	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0187427_27	394503.Ccel_3302	145.0	6.96445e-43	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0187427_27	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0187427_27	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0187427_27	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0187427_28	K07505	368.5	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0187427_28	phrog_2597	1090.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187427_28	UniRef90_A0A2A6Z731	1334.0	0	DNA primase	N/A
eggNOG-mapper	UHGV-0187427_28	742738.HMPREF9460_01357	872.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0187427_28	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0187427_28	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0187427_28	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0187427_28	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0187427_29	K17677	351.9	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0187427_29	phrog_16	275.2	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187427_29	UniRef90_A0A3A6K1C0	991.0	0	DEAD/DEAH box helicase	N/A
eggNOG-mapper	UHGV-0187427_29	610130.Closa_1369	768.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0187427_29	mREase_IV_00005	138.7	4.90006e-41	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0187427_29	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0187427_29	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0187427_29	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0187427_29	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_30	phrog_2698	193.0	0	N/A	unknown function
UniRef90	UHGV-0187427_30	UniRef90_A0A291T9B6	305.0	0	N/A	N/A
eggNOG-mapper	UHGV-0187427_30	394503.Ccel_3308	129.0	3.99e-36	N/A	N/A
structural_annotation	UHGV-0187427_30	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0187427_31	phrog_124	231.3	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0187427_31	UniRef90_UPI00122C2B12	544.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0187427_31	645991.Sgly_0321	361.0	0	AAA domain	N/A
Pfam	UHGV-0187427_31	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0187427_31	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0187427_32	K03546	59.2	5.6e-17	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0187427_32	phrog_1499	466.5	0	N/A	unknown function
UniRef90	UHGV-0187427_32	UniRef90_A0A3A6KBP8	751.0	0	Chromosome segregation protein SMC	N/A
eggNOG-mapper	UHGV-0187427_32	1235798.C817_04766	485.0	0	AAA ATPase domain	N/A
Pfam	UHGV-0187427_32	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0187427_32	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0187427_32	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0187427_33	665956.HMPREF1032_03597	197.0	0	DNA binding	N/A
COG	UHGV-0187427_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
UniRef90	UHGV-0187427_34	UniRef90_UPI001D0E65C2	162.0	0	N/A	N/A
structural_annotation	UHGV-0187427_34	PF12957	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0187427_37	PF07875,TIGR02501	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187427_40	UniRef90_A0A2A7BGV7	75.9	1.92e-16	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0187427_40	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0187427_40	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0187427_43	UniRef90_UPI001D0EF465	56.2	0.00000000458	BC1881 family protein	N/A
KOfam	UHGV-0187427_44	K18830	64.0	2.5e-18	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-0187427_44	phrog_8	54.5	6.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0187427_44	UniRef90_A0A564SVW9	200.0	0	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0187427_44	748224.HMPREF9436_01444	155.0	0	N/A	N/A
Pfam	UHGV-0187427_44	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0187427_44	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0187427_44	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0187427_46	K14059	155.9	0	int; integrase	N/A
PHROG	UHGV-0187427_46	phrog_1	138.7	5.19994e-41	integrase	integration and excision
UniRef90	UHGV-0187427_46	UniRef90_A0A2A7AII9	676.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0187427_46	748224.HMPREF9436_03382	321.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0187427_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0187427_46	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0187427_46	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0187427	Yes	34,446	61	100	1
UHGV-2087059	No	20,584	61	61	1
UHGV-2060033	No	14,793	61	44	1
UHGV-2122645	No	12,337	63	34	1
UHGV-1622234	No	11,338	61	31	1
UHGV-1668431	No	10,044	62	30	1
UHGV-2068560	No	10,279	63	27	1