vOTU vOTU-069672

vOTU: vOTU-069672

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-069672
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Lawsonibacter
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-01336 → vGENUS-05047 → vSUBGEN-09523 → vOTU-069672
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae
Host range breadth	Family
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0896350
Biosample ID	SAMN07211096
Genome length (bp)	38,316 bps
CheckV completeness	90.36% (High-quality)
CDS count	64
CDS density	94.46%
tRNA count	1
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae	Total connections	27	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Lawsonibacter	Total connections	7	Host agreement	71.43

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.36)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0896350_2	phrog_32744	662.5	0	N/A	unknown function
eggNOG-mapper	UHGV-0896350_2	1120998.AUFC01000030_gene2247	237.0	0	N/A	N/A
structural_annotation	UHGV-0896350_2	PF14594,PF21722,NF033848,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_3	phrog_1194	70.3	2.3e-20	N/A	unknown function
eggNOG-mapper	UHGV-0896350_3	1226322.HMPREF1545_00060	236.0	0	N/A	N/A
structural_annotation	UHGV-0896350_3	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_4	phrog_1535	110.5	1.3e-35	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0896350_4	693746.OBV_18190	434.0	0	domain protein	N/A
COG	UHGV-0896350_4	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_5	phrog_706	120.4	1.2e-35	N/A	unknown function
UniRef90	UHGV-0896350_5	UniRef90_UPI000682A80B	269.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0896350_5	693746.OBV_18170	256.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0896350_5	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0896350_5	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_6	phrog_11299	87.7	1.2e-25	N/A	unknown function
eggNOG-mapper	UHGV-0896350_6	693746.OBV_18160	196.0	0	N/A	N/A
structural_annotation	UHGV-0896350_6	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_7	phrog_3099	91.2	1.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0896350_7	1232443.BAIA02000078_gene23	273.0	0	N/A	N/A
structural_annotation	UHGV-0896350_7	PF10772,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_8	phrog_3266	56.2	5.3e-16	tail completion	connector
eggNOG-mapper	UHGV-0896350_8	1226322.HMPREF1545_00055	244.0	0	N/A	N/A
structural_annotation	UHGV-0896350_8	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_9	phrog_556	76.6	2.2e-22	minor head protein	head and packaging
UniRef90	UHGV-0896350_9	UniRef90_A0A2U1BEM0	195.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0896350_9	1226322.HMPREF1545_00054	190.0	0	Minor capsid protein	N/A
Pfam	UHGV-0896350_9	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0896350_9	PF11114,TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_10	phrog_3366	104.3	8.4e-31	N/A	unknown function
eggNOG-mapper	UHGV-0896350_10	1226322.HMPREF1545_00053	235.0	0	N/A	N/A
structural_annotation	UHGV-0896350_10	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_11	phrog_541	88.7	4.6e-26	head-tail adaptor	connector
eggNOG-mapper	UHGV-0896350_11	1120998.AUFC01000030_gene2237	57.0	0.0000000181	N/A	N/A
PHROG	UHGV-0896350_12	phrog_10	183.9	0	major head protein	head and packaging
UniRef90	UHGV-0896350_12	UniRef90_U2SBS0	544.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0896350_12	1226322.HMPREF1545_00050	544.0	0	Phage capsid family	N/A
Pfam	UHGV-0896350_12	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0896350_12	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0896350_12	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0896350_12	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0896350_13	1226322.HMPREF1545_00049	134.0	5.21e-38	N/A	N/A
PHROG	UHGV-0896350_14	phrog_581	290.6	0	minor head protein	head and packaging
UniRef90	UHGV-0896350_14	UniRef90_UPI001D080D49	601.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-0896350_14	1226322.HMPREF1545_00046	359.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0896350_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0896350_14	PF18451	N/A	N/A	Contact-dependent growth inhibition CdiA C-terminal domain	CdiA_C
COG	UHGV-0896350_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0896350_14	PF06152,PF15542	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_15	phrog_533	403.1	0	portal protein	head and packaging
UniRef90	UHGV-0896350_15	UniRef90_A0A2U1BEK0	777.0	0	A118 family predicted phage portal protein	N/A
eggNOG-mapper	UHGV-0896350_15	1226322.HMPREF1545_00044	763.0	0	N/A	N/A
Pfam	UHGV-0896350_15	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0896350_15	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0896350_16	K06909	124.5	1.1e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0896350_16	phrog_10250	170.1	0	N/A	unknown function
UniRef90	UHGV-0896350_16	UniRef90_A0A1C6J947	703.0	0	Bacteriophage terminase large (ATPase) subunit and inactivated derivatives	N/A
eggNOG-mapper	UHGV-0896350_16	1226322.HMPREF1545_00043	674.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-0896350_16	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0896350_16	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0896350_16	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0896350_16	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
UniRef90	UHGV-0896350_17	UniRef90_U2R3C0	211.0	0	Nascent polypeptide-associated complex domain protein	N/A
eggNOG-mapper	UHGV-0896350_17	1226322.HMPREF1545_00042	211.0	0	N/A	N/A
structural_annotation	UHGV-0896350_17	PF13542	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_19	phrog_8680	216.9	0	N/A	unknown function
UniRef90	UHGV-0896350_19	UniRef90_UPI00189ACAD3	384.0	0	N/A	N/A
eggNOG-mapper	UHGV-0896350_19	411470.RUMGNA_02208	207.0	0	N/A	N/A
Pfam	UHGV-0896350_19	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-0896350_19	PF14386	N/A	N/A	N/A	N/A
KOfam	UHGV-0896350_21	K22300	51.0	0.000000000000023	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-0896350_21	UniRef90_A0A096DGF2	251.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0896350_21	742738.HMPREF9460_00887	251.0	0	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0896350_21	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0896350_21	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0896350_23	216594.MMAR_1994	52.4	0.000000293	Negatively regulates transcription of bacterial ribonucleotide reductase nrd genes and operons by binding to NrdR- boxes	N/A
COG	UHGV-0896350_23	COG1327	N/A	N/A	Transcriptional regulator NrdR, contains Zn-ribbon and ATP-cone domains	N/A
PHROG	UHGV-0896350_24	phrog_2245	47.9	0.00000000000023	nucleoside triphosphate pyrophosphohydrolase	other
structural_annotation	UHGV-0896350_24	NF001611,COG1694	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0896350_25	318464.IO99_07375	79.7	4.45e-18	N/A	N/A
PHROG	UHGV-0896350_27	phrog_31029	137.9	1.6e-41	N/A	unknown function
PHROG	UHGV-0896350_28	phrog_7704	43.3	0.0000000000056	N/A	unknown function
UniRef90	UHGV-0896350_28	UniRef90_UPI001958DC75	98.6	1.11e-24	N/A	N/A
eggNOG-mapper	UHGV-0896350_28	665950.HMPREF1025_02540	70.1	0.000000000000488	N/A	N/A
Pfam	UHGV-0896350_28	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-0896350_28	PF04448	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_29	phrog_874	155.6	0	N/A	unknown function
UniRef90	UHGV-0896350_29	UniRef90_A0A6N7W7Q7	160.0	0	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0896350_29	632245.CLP_1629	148.0	2.40042e-42	N/A	N/A
structural_annotation	UHGV-0896350_29	PF04266,MF_00684,NF003443,COG4405	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0896350_33	552398.HMPREF0866_03131	58.5	0.0000000000868	N/A	N/A
PHROG	UHGV-0896350_34	phrog_4433	148.5	0	N/A	unknown function
UniRef90	UHGV-0896350_34	UniRef90_A0A6M5C839	105.0	1.05e-24	Putative ADP-ribosyltransferase	N/A
eggNOG-mapper	UHGV-0896350_34	645991.Sgly_0315	177.0	0	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-0896350_34	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-0896350_34	PF12120,NF000318	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0896350_36	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_37	phrog_2562	100.4	2.2e-29	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0896350_37	UniRef90_A0A1C6D5S6	268.0	0	N/A	N/A
eggNOG-mapper	UHGV-0896350_37	1235790.C805_00030	174.0	0	N/A	N/A
Pfam	UHGV-0896350_37	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0896350_37	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0896350_38	phrog_1029	248.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0896350_38	552398.HMPREF0866_01625	261.0	0	N/A	N/A
structural_annotation	UHGV-0896350_38	PF10065,COG5532	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_39	phrog_997	114.6	5.6e-34	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0896350_39	UniRef90_R6MCS9	105.0	6.47e-27	N/A	N/A
eggNOG-mapper	UHGV-0896350_39	1203606.HMPREF1526_01889	138.0	1.03e-40	replication terminator protein, phage associated	N/A
KOfam	UHGV-0896350_40	K06167	69.6	3.8e-20	phnP; phosphoribosyl 1,2-cyclic phosphate phosphodiesterase [EC:3.1.4.55]	N/A
PHROG	UHGV-0896350_40	phrog_392	186.2	0	metal-dependent hydrolase	other
UniRef90	UHGV-0896350_40	UniRef90_UPI00195A5026	303.0	0	MBL fold metallo-hydrolase	N/A
eggNOG-mapper	UHGV-0896350_40	1203606.HMPREF1526_00311	192.0	0	Metallo-beta-lactamase superfamily	N/A
Pfam	UHGV-0896350_40	PF12706	N/A	N/A	Beta-lactamase superfamily domain	Lactamase_B_2
dbAPIS	UHGV-0896350_40	APIS058	N/A	N/A	N/A	N/A
COG	UHGV-0896350_40	COG1235	N/A	N/A	Phosphoribosyl 1,2-cyclic phosphate phosphodiesterase	N/A
structural_annotation	UHGV-0896350_40	PF02112,MF_01818,NF041851,COG1234	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_41	phrog_862	56.9	3.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0896350_41	1203606.HMPREF1526_00310	192.0	0	N/A	N/A
structural_annotation	UHGV-0896350_41	PF05037,COG2965	N/A	N/A	N/A	N/A
KOfam	UHGV-0896350_42	K19171	73.2	7e-22	dndD; DNA sulfur modification protein DndD	N/A
PHROG	UHGV-0896350_42	phrog_77	216.6	0	SbcC-like subunit of palindrome specific endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0896350_42	UniRef90_UPI001959E3D8	644.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0896350_42	1203606.HMPREF1526_00309	403.0	0	nuclear chromosome segregation	N/A
Pfam	UHGV-0896350_42	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0896350_42	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0896350_42	PF02463,MF_00449,NF041034,COG0419	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0896350_45	PF13560	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0896350_47	PF12728,NF040990,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0896350_48	UniRef90_A0A845R4W0	112.0	5.84e-31	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0896350_48	742738.HMPREF9460_02486	73.2	3.59e-16	N/A	N/A
structural_annotation	UHGV-0896350_48	PF13443,NF000090,COG1813	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_49	phrog_8	62.9	6.7e-18	transcriptional regulator	transcription regulation
UniRef90	UHGV-0896350_49	UniRef90_A0A1Y3RHT3	155.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0896350_49	742738.HMPREF9460_02485	96.7	3.25e-24	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0896350_49	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-0896350_49	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0896350_49	PF12844,NF041951,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_50	phrog_87	83.0	2.6e-24	metallo-protease	other
UniRef90	UHGV-0896350_50	UniRef90_A0A1Y3RG05	211.0	0	Peptidase_M78 domain-containing protein	N/A
eggNOG-mapper	UHGV-0896350_50	1007096.BAGW01000011_gene2354	140.0	6.87001e-41	IrrE N-terminal-like domain	N/A
Pfam	UHGV-0896350_50	PF06114	N/A	N/A	IrrE N-terminal-like domain	Peptidase_M78
COG	UHGV-0896350_50	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0896350_50	PF06114,COG2856	N/A	N/A	N/A	N/A
Pfam	UHGV-0896350_51	PF12869	N/A	N/A	tRNA_anti-like	tRNA_anti-like
KOfam	UHGV-0896350_52	K14059	219.7	0	int; integrase	N/A
PHROG	UHGV-0896350_52	phrog_1	214.0	0	integrase	integration and excision
UniRef90	UHGV-0896350_52	UniRef90_A0A1C5N3H1	564.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0896350_52	1321814.HMPREF9089_00905	204.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0896350_52	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0896350_52	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0896350_52	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0896350_52	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0896350_53	1226322.HMPREF1545_00079	132.0	2.03e-38	N/A	N/A
eggNOG-mapper	UHGV-0896350_54	476272.RUMHYD_01772	51.6	0.0000042	N/A	N/A
PHROG	UHGV-0896350_55	phrog_20016	176.7	0	N/A	unknown function
UniRef90	UHGV-0896350_55	UniRef90_A0A285PT46	156.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0896350_55	1226322.HMPREF1545_00077	147.0	1.55544e-43	N/A	N/A
structural_annotation	UHGV-0896350_55	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_56	phrog_16490	209.2	0	N/A	unknown function
eggNOG-mapper	UHGV-0896350_56	658655.HMPREF0988_00917	216.0	0	N/A	N/A
PHROG	UHGV-0896350_57	phrog_22984	107.8	4.8e-32	N/A	unknown function
PHROG	UHGV-0896350_58	phrog_21718	116.9	1.3e-34	N/A	unknown function
eggNOG-mapper	UHGV-0896350_58	397290.C810_05210	74.3	0.0000000000000143	N/A	N/A
PHROG	UHGV-0896350_59	phrog_3754	103.2	2e-30	N/A	unknown function
eggNOG-mapper	UHGV-0896350_59	476272.RUMHYD_01764	181.0	0	N/A	N/A
UniRef90	UHGV-0896350_61	UniRef90_A0A1C6JAI6	75.1	4.99e-16	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-0896350_61	PF16509,MF_00674,NF008895,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-0896350_62	K01448	115.0	8.5e-34	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0896350_62	phrog_435	123.5	1.8e-36	endolysin	lysis
UniRef90	UHGV-0896350_62	UniRef90_A0A1G8HCT6	161.0	1.25977e-42	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-0896350_62	1410668.JNKC01000001_gene1675	161.0	2.11596e-43	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-0896350_62	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
Pfam	UHGV-0896350_62	PF09992	N/A	N/A	Phosphodiester glycosidase	NAGPA
COG	UHGV-0896350_62	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0896350_62	PF01520,PF09992,PF01471,MF_00562,TIGR02883,COG0860,COG4632,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0896350_64	phrog_1129	62.5	4.7e-18	holin	lysis
UniRef90	UHGV-0896350_64	UniRef90_UPI001D084907	122.0	1.95e-34	phage holin family protein	N/A
eggNOG-mapper	UHGV-0896350_64	1007096.BAGW01000036_gene2663	108.0	5.25e-30	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0896350_64	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0896350_64	PF06946	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0896350	Yes	38,316	55	90	1
UHGV-2194196	No	22,082	57	52	1
UHGV-2203442	No	15,936	52	37	1