vOTU vOTU-069869

vOTU: vOTU-069869

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-069869
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00740 → vGENUS-01036 → vSUBGEN-23382 → vOTU-069869
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → UBA738 → UBA738 sp003522945
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0210625
Biosample ID	SAMN09781784
Genome length (bp)	36,002 bps
CheckV completeness	97.10% (High-quality)
CDS count	64
CDS density	95.48%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → UBA738 → UBA738 sp003522945	Total connections	54	Host agreement	83.33
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.1)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0210625_3	PF20763,MF_00273,NF001981	N/A	N/A	N/A	N/A
KOfam	UHGV-0210625_4	K22300	41.5	0.000000000024	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0210625_4	phrog_2967	40.0	0.000000000047	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210625_4	UniRef90_UPI001EDCF802	115.0	1.15e-30	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0210625_4	411471.SUBVAR_05818	92.0	2.95e-22	sequence-specific DNA binding	N/A
Pfam	UHGV-0210625_4	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0210625_4	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0210625_6	phrog_5610	73.5	1.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0210625_6	655812.HMPREF0061_0218	122.0	6.58e-31	N/A	N/A
Pfam	UHGV-0210625_6	PF16729	N/A	N/A	N/A	DUF5067
COG	UHGV-0210625_6	COG3170	N/A	N/A	Type IV pilus assembly protein FimV	N/A
eggNOG-mapper	UHGV-0210625_7	428127.EUBDOL_00130	54.7	0.000000349	sequence-specific DNA binding	N/A
COG	UHGV-0210625_7	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0210625_7	PF13443,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0210625_8	K06400	297.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0210625_8	phrog_95	310.7	0	integrase	integration and excision
UniRef90	UHGV-0210625_8	UniRef90_A0A3A9I9T1	357.0	0	Recombinase family protein	N/A
eggNOG-mapper	UHGV-0210625_8	1378168.N510_03180	269.0	0	resolvase	N/A
Pfam	UHGV-0210625_8	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0210625_8	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0210625_8	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0210625_8	PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210625_9	1226322.HMPREF1545_00079	95.1	7.53e-24	N/A	N/A
eggNOG-mapper	UHGV-0210625_10	476272.RUMHYD_01772	53.1	0.00000099	N/A	N/A
structural_annotation	UHGV-0210625_10	PF12510	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_11	phrog_20016	190.4	0	N/A	unknown function
UniRef90	UHGV-0210625_11	UniRef90_A0A285PT46	196.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-0210625_11	1226322.HMPREF1545_00077	167.0	0	N/A	N/A
structural_annotation	UHGV-0210625_11	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_12	phrog_16490	115.1	1e-35	N/A	unknown function
eggNOG-mapper	UHGV-0210625_12	1408437.JNJN01000043_gene803	157.0	4.2039e-45	N/A	N/A
PHROG	UHGV-0210625_13	phrog_22984	85.4	4.7e-25	N/A	unknown function
PHROG	UHGV-0210625_14	phrog_21718	89.5	3.2e-26	N/A	unknown function
eggNOG-mapper	UHGV-0210625_14	397290.C810_05210	80.9	2.15e-17	N/A	N/A
PHROG	UHGV-0210625_15	phrog_3754	95.1	5.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0210625_15	476272.RUMHYD_01764	150.0	2.8026e-45	N/A	N/A
UniRef90	UHGV-0210625_16	UniRef90_A0A8D9PDT6	69.7	0.0000000000000829	Transcriptional regulatory protein	N/A
PHROG	UHGV-0210625_17	phrog_1129	79.3	3.1e-23	holin	lysis
UniRef90	UHGV-0210625_17	UniRef90_A0A1H3XEH1	108.0	4.65e-29	Phage holin family Hol44, holin superfamily V	N/A
eggNOG-mapper	UHGV-0210625_17	1226322.HMPREF1545_00069	99.0	5.14e-26	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0210625_17	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0210625_17	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0210625_18	33035.JPJF01000090_gene94	48.1	0.00000933	N/A	N/A
KOfam	UHGV-0210625_19	K07273	130.5	1.9e-38	acm; lysozyme	N/A
PHROG	UHGV-0210625_19	phrog_291	119.5	3.8e-35	endolysin	lysis
UniRef90	UHGV-0210625_19	UniRef90_A0A3D2G0D9	434.0	0	Cpl-7 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210625_19	877415.JNJQ01000013_gene314	171.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0210625_19	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0210625_19	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0210625_19	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0210625_19	PF01183,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_21	phrog_9534	127.5	1.2e-37	head protein	head and packaging
UniRef90	UHGV-0210625_21	UniRef90_A7GI58	73.9	0.0000000000945	Putative phage structural protein	N/A
eggNOG-mapper	UHGV-0210625_21	748224.HMPREF9436_00702	97.4	4.79e-20	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-0210625_21	PF20747	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_22	phrog_538	100.9	1.2e-29	minor tail protein	tail
UniRef90	UHGV-0210625_22	UniRef90_UPI001C113FEF	346.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0210625_22	931626.Awo_c30930	65.9	0.00000000411	Siphovirus ReqiPepy6 Gp37-like protein	N/A
Pfam	UHGV-0210625_22	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0210625_22	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_23	phrog_36410	67.0	2e-19	N/A	unknown function
UniRef90	UHGV-0210625_23	UniRef90_UPI001C0FCFFA	363.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-0210625_23	1211817.CCAT010000079_gene1379	88.6	1.18e-17	Phage tail protein	N/A
COG	UHGV-0210625_23	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0210625_23	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_24	phrog_23464	261.1	0	N/A	unknown function
eggNOG-mapper	UHGV-0210625_24	665950.HMPREF1025_02660	262.0	0	phage tail tape measure protein	N/A
COG	UHGV-0210625_24	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0210625_24	PF20155,MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_26	phrog_885	72.7	4.2e-21	major tail protein	tail
UniRef90	UHGV-0210625_26	UniRef90_A0A843J9F0	203.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-0210625_26	1504822.CCNO01000012_gene492	230.0	0	N/A	N/A
structural_annotation	UHGV-0210625_26	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210625_27	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_28	phrog_17977	41.7	0.000000000017	N/A	unknown function
Pfam	UHGV-0210625_28	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-0210625_28	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
structural_annotation	UHGV-0210625_28	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_30	phrog_267	187.3	0	major head protein	head and packaging
UniRef90	UHGV-0210625_30	UniRef90_A0A3Q9B9E4	262.0	0	P22 coat protein-protein 5 domain protein	N/A
eggNOG-mapper	UHGV-0210625_30	877414.ATWA01000001_gene909	256.0	0	P22 coat protein-protein 5 domain protein	N/A
structural_annotation	UHGV-0210625_30	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
UniRef90	UHGV-0210625_31	UniRef90_A0A6B9SU02	92.0	1.12e-19	Fibronectin autolysin	N/A
structural_annotation	UHGV-0210625_31	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_32	phrog_5	65.4	1.3e-18	tail completion or Neck1 protein	connector
UniRef90	UHGV-0210625_32	UniRef90_UPI000691EB78	71.2	0.00000000000049	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0210625_32	683837.lse_1605	57.8	0.0000000104	N/A	N/A
Pfam	UHGV-0210625_32	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0210625_32	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_33	phrog_35328	135.0	1.6e-40	N/A	unknown function
PHROG	UHGV-0210625_34	phrog_2468	99.2	5.9e-29	head morphogenesis	head and packaging
UniRef90	UHGV-0210625_34	UniRef90_A0A4D7AUA1	336.0	0	Phage head morphogenesis protein	N/A
eggNOG-mapper	UHGV-0210625_34	1235792.C808_05364	184.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-0210625_34	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
COG	UHGV-0210625_34	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0210625_34	PF04233,PF21814,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_35	phrog_64	161.7	0	portal protein	head and packaging
UniRef90	UHGV-0210625_35	UniRef90_UPI0018A8A301	590.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0210625_35	673376.F2VHW1_9CAUD	208.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0210625_35	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0210625_35	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_36	phrog_38	161.5	0	terminase large subunit	head and packaging
UniRef90	UHGV-0210625_36	UniRef90_UPI00046F67CE	412.0	0	terminase family protein	N/A
eggNOG-mapper	UHGV-0210625_36	1140001.I571_01829	416.0	0	N/A	N/A
structural_annotation	UHGV-0210625_36	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
KOfam	UHGV-0210625_37	K07474	138.7	5.99994e-41	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0210625_37	phrog_51	138.9	2.50006e-41	terminase small subunit	head and packaging
UniRef90	UHGV-0210625_37	UniRef90_A0A1I5G7W6	166.0	0	Phage terminase small subunit	N/A
eggNOG-mapper	UHGV-0210625_37	445971.ANASTE_00710	134.0	2.88e-38	Terminase small subunit	N/A
Pfam	UHGV-0210625_37	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0210625_37	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0210625_37	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_38	phrog_36	54.1	0.0000000000000027	transcriptional regulator	transcription regulation
UniRef90	UHGV-0210625_38	UniRef90_UPI001C10AB33	67.8	0.0000000000133	N/A	N/A
eggNOG-mapper	UHGV-0210625_38	428125.CLOLEP_01806	55.8	0.0000000972	N/A	N/A
structural_annotation	UHGV-0210625_38	PF07374,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_47	phrog_21034	48.5	0.00000000000015	N/A	unknown function
PHROG	UHGV-0210625_48	phrog_924	43.3	0.0000000000069	N/A	unknown function
UniRef90	UHGV-0210625_48	UniRef90_A0A6A8VJ88	52.8	0.000000936	N/A	N/A
Pfam	UHGV-0210625_48	PF04448	N/A	N/A	N/A	DUF551
UniRef90	UHGV-0210625_49	UniRef90_R6QWY1	102.0	1.36e-26	28	N/A
PHROG	UHGV-0210625_50	phrog_10714	46.8	0.00000000000041	N/A	unknown function
PHROG	UHGV-0210625_51	phrog_374	73.8	1.6e-41	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_51	UniRef90_UPI000BFE1C74	110.0	8.7e-26	AP2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0210625_51	478749.BRYFOR_05054	113.0	3.68e-27	AP2 domain protein	N/A
structural_annotation	UHGV-0210625_51	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_52	phrog_1770	99.5	3.4e-29	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_52	UniRef90_A0A7W1N8Z0	101.0	1.28e-24	Holliday junction endonuclease	N/A
eggNOG-mapper	UHGV-0210625_52	329726.AM1_4255	103.0	5.07e-26	Nuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves the cruciform structure in supercoiled DNA by nicking to strands with the same polarity at sites symmetrically opposed at the junction in the homologous arms and leaves a 5'-terminal phosphate and a 3'-terminal hydroxyl group	N/A
COG	UHGV-0210625_52	COG0817	N/A	N/A	Holliday junction resolvasome RuvABC endonuclease subunit RuvC	N/A
structural_annotation	UHGV-0210625_52	PF16921,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
KOfam	UHGV-0210625_53	K00558	146.5	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0210625_53	phrog_116	186.6	0	DNA methyltransferase	other
UniRef90	UHGV-0210625_53	UniRef90_A0A316NA61	379.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0210625_53	718252.FP2_16350	345.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0210625_53	oMTase_00004	188.1	0	orphan methyltransferase	RM
Pfam	UHGV-0210625_53	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0210625_53	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0210625_53	PF00145,TIGR00675	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_54	phrog_20437	159.8	0	DNA replication initiation	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_54	UniRef90_UPI00137AD09D	181.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210625_54	445971.ANASTE_00700	161.0	1.4013e-45	N/A	N/A
Pfam	UHGV-0210625_54	PF14297	N/A	N/A	Lin1244/Lin1753-like, N-terminal	Lin1244_N
COG	UHGV-0210625_54	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0210625_54	PF14297,PF07261,TIGR01446,COG3935	N/A	N/A	N/A	N/A
KOfam	UHGV-0210625_55	K03111	130.4	2.1e-38	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0210625_55	phrog_44	121.2	9e-36	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_55	UniRef90_A0A3D5TQC4	130.0	2.25e-36	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0210625_55	693746.OBV_19910	129.0	5.81e-37	Single-strand binding protein family	N/A
Pfam	UHGV-0210625_55	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0210625_55	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0210625_55	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0210625_55	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0210625_55	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_56	phrog_7370	66.5	3.4e-19	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_56	UniRef90_UPI000933A555	134.0	1.26e-38	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0210625_56	1232449.BAHV02000016_gene1841	86.3	1.7e-20	HNH nucleases	N/A
Pfam	UHGV-0210625_56	PF01844	N/A	N/A	HNH endonuclease	HNH
PHROG	UHGV-0210625_57	phrog_59	136.2	1.10001e-40	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_57	UniRef90_A0A2T3EXE0	125.0	4.82e-33	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-0210625_57	508419.F8J188_9CAUD	122.0	1.33e-32	HNH endonuclease	N/A
PADLOC	UHGV-0210625_57	HEase_00016	106.1	5.9e-31	homing endonuclease	RM
Pfam	UHGV-0210625_57	PF07463	N/A	N/A	NUMOD4 motif	NUMOD4
Pfam	UHGV-0210625_57	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-0210625_57	PF07463,PF07453,TIGR01453	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_58	phrog_72	49.9	0.000000000000056	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_58	UniRef90_UPI001F3F3E5C	100.0	1.63e-23	recombination protein NinB	N/A
eggNOG-mapper	UHGV-0210625_58	1507.HMPREF0262_00432	102.0	2.71e-25	N/A	N/A
structural_annotation	UHGV-0210625_58	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_59	phrog_659	202.0	0	Sak-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0210625_59	UniRef90_UPI001E5A6693	295.0	0	N/A	N/A
eggNOG-mapper	UHGV-0210625_59	1507.HMPREF0262_00431	229.0	0	N/A	N/A
Pfam	UHGV-0210625_59	PF06378	N/A	N/A	N/A	DUF1071
structural_annotation	UHGV-0210625_59	PF06378,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0210625_63	phrog_5781	76.2	4.4e-22	N/A	unknown function
UniRef90	UHGV-0210625_63	UniRef90_A0A2V2FSM6	94.0	7.89e-23	Nucleoside 2-deoxyribosyltransferase	N/A
eggNOG-mapper	UHGV-0210625_63	573061.Clocel_3558	95.5	3.01e-24	N/A	N/A
Pfam	UHGV-0210625_63	PF14359	N/A	N/A	N/A	DUF4406
COG	UHGV-0210625_63	COG3613	N/A	N/A	Nucleoside 2-deoxyribosyltransferase	N/A
structural_annotation	UHGV-0210625_63	PF14359,MF_03036,COG3613	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0210625	Yes	36,002	55	97	1
UHGV-0186349	No	27,323	56	74	1
UHGV-1757054	No	15,504	58	42	1
UHGV-0172746	No	13,856	54	35	1
UHGV-1715700	No	10,566	59	28	1