vOTU vOTU-069910

vOTU: vOTU-069910

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-069910
Number of genomes	4
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000436735
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00060 → vGENUS-15991 → vSUBGEN-28360 → vOTU-069910
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales
Host range breadth	Order
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1493667
Biosample ID	SAMN03283272
Genome length (bp)	43,639 bps
CheckV completeness	99.90% (High-quality)
CDS count	55
CDS density	91.78%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales	Total connections	27	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000436735	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1493667_1	UniRef90_A0A6L8T004	83.6	7.49e-19	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1493667_1	411471.SUBVAR_05818	60.1	0.000000000215	sequence-specific DNA binding	N/A
COG	UHGV-1493667_1	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1493667_3	PF01381,MF_02017,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1493667_4	K14059	131.8	8.4e-39	int; integrase	N/A
PHROG	UHGV-1493667_4	phrog_1	144.9	6.50202e-43	integrase	integration and excision
UniRef90	UHGV-1493667_4	UniRef90_A0A2Z4QB94	319.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1493667_4	641112.ACOK01000111_gene1860	103.0	2.84e-22	Phage integrase family	N/A
Pfam	UHGV-1493667_4	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1493667_4	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1493667_4	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-1493667_7	K19167	119.6	3.5e-35	abiQ; protein AbiQ	N/A
PHROG	UHGV-1493667_7	phrog_9764	122.8	2.3e-36	N/A	unknown function
UniRef90	UHGV-1493667_7	UniRef90_A0A845R8D8	213.0	0	Type III toxin-antitoxin system ToxN/AbiQ family toxin	N/A
eggNOG-mapper	UHGV-1493667_7	1519439.JPJG01000060_gene1906	181.0	0	Toxin ToxN, type III toxin-antitoxin system	N/A
PADLOC	UHGV-1493667_7	AbiQ	149.6	2.66247e-44	AbiQ	Abi
Pfam	UHGV-1493667_7	PF13958	N/A	N/A	Toxin ToxN, type III toxin-antitoxin system	ToxN_toxin
structural_annotation	UHGV-1493667_7	PF13958	N/A	N/A	N/A	N/A
UniRef90	UHGV-1493667_8	UniRef90_A0A1C6JAI6	67.0	0.000000000000718	RNA polymerase sigma factor, sigma-70 family	N/A
structural_annotation	UHGV-1493667_8	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
KOfam	UHGV-1493667_9	K01447	108.7	6.9e-32	xlyAB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1493667_9	phrog_1794	110.6	1.7e-32	amidase	lysis
UniRef90	UHGV-1493667_9	UniRef90_A0A3D4VSU2	164.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1493667_9	411470.RUMGNA_02087	149.0	1.72e-39	N-Acetylmuramoyl-L-alanine amidase	N/A
Pfam	UHGV-1493667_9	PF01510	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_2
COG	UHGV-1493667_9	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1493667_9	PF01510,MF_04111,NF008758,COG5632	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_10	phrog_13256	60.0	2.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-1493667_10	428125.CLOLEP_01907	72.8	3.27e-16	N/A	N/A
PHROG	UHGV-1493667_11	phrog_355	58.8	8.8e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493667_11	UniRef90_UPI00156F0E9C	162.0	0	N/A	N/A
eggNOG-mapper	UHGV-1493667_11	397290.C810_05229	153.0	0	N/A	N/A
Pfam	UHGV-1493667_11	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1493667_11	PF14359,MF_03036,TIGR03646,COG3613	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_13	phrog_937	51.1	0.000000000000024	hemolysin	other
eggNOG-mapper	UHGV-1493667_13	1519439.JPJG01000023_gene533	73.9	0.0000000000000018	N/A	N/A
KOfam	UHGV-1493667_14	K01126	74.4	1.2e-21	E3.1.4.46, glpQ, ugpQ; glycerophosphoryl diester phosphodiesterase [EC:3.1.4.46]	N/A
PHROG	UHGV-1493667_14	phrog_11541	49.3	0.000000000000032	N/A	unknown function
Pfam	UHGV-1493667_14	PF03009	N/A	N/A	Glycerophosphoryl diester phosphodiesterase family	GDPD
COG	UHGV-1493667_14	COG2755	N/A	N/A	Lysophospholipase L1 or related esterase. Includes spore coat protein LipC/YcsK	N/A
PHROG	UHGV-1493667_15	phrog_5240	63.1	3.3e-18	tail fiber protein	tail
Pfam	UHGV-1493667_15	PF13472	N/A	N/A	GDSL-like Lipase/Acylhydrolase family	Lipase_GDSL_2
COG	UHGV-1493667_15	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
eggNOG-mapper	UHGV-1493667_16	1232443.BAIA02000078_gene14	56.6	0.00000276	nuclear chromosome segregation	N/A
COG	UHGV-1493667_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
KOfam	UHGV-1493667_17	K19721	42.9	0.0000000000014	COL5AS; collagen type V/XI/XXIV/XXVII, alpha	N/A
Pfam	UHGV-1493667_17	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-1493667_17	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-1493667_18	PF18962,NF011773	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_19	phrog_22978	79.8	6.9e-26	N/A	unknown function
eggNOG-mapper	UHGV-1493667_19	1519439.JPJG01000060_gene1905	695.0	0	N/A	N/A
Pfam	UHGV-1493667_19	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
UniRef90	UHGV-1493667_20	UniRef90_R5DCX9	190.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1493667_20	1410650.JHWL01000003_gene2815	131.0	1.65e-31	N/A	N/A
eggNOG-mapper	UHGV-1493667_22	537007.BLAHAN_05255	61.6	0.000000271	N/A	N/A
PHROG	UHGV-1493667_23	phrog_12105	115.8	2.2e-34	N/A	unknown function
PHROG	UHGV-1493667_24	phrog_15239	44.3	0.0000000000025	N/A	unknown function
PHROG	UHGV-1493667_25	phrog_1357	240.0	0	major head protein	head and packaging
UniRef90	UHGV-1493667_25	UniRef90_A0A2V2CFL5	393.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-1493667_25	1410650.JHWL01000003_gene2830	289.0	0	N/A	N/A
Pfam	UHGV-1493667_25	PF13252	N/A	N/A	N/A	DUF4043
NCBIFam	UHGV-1493667_25	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-1493667_25	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_26	phrog_13908	190.1	0	N/A	unknown function
eggNOG-mapper	UHGV-1493667_26	1410650.JHWL01000003_gene2831	124.0	1.28e-30	N/A	N/A
PHROG	UHGV-1493667_27	phrog_156	305.7	0	portal protein	head and packaging
eggNOG-mapper	UHGV-1493667_27	1410650.JHWL01000003_gene2833	536.0	0	N/A	N/A
structural_annotation	UHGV-1493667_27	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_28	phrog_511	210.5	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-1493667_28	1410650.JHWL01000003_gene2827	320.0	0	N/A	N/A
structural_annotation	UHGV-1493667_28	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
KOfam	UHGV-1493667_29	K06909	133.4	2.2e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1493667_29	phrog_979	122.1	6.5e-38	terminase large subunit	head and packaging
UniRef90	UHGV-1493667_29	UniRef90_A0A810Q5R0	609.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1493667_29	1410650.JHWL01000003_gene2834	573.0	0	N/A	N/A
Pfam	UHGV-1493667_29	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1493667_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1493667_29	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493667_30	PF16677	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_31	phrog_3584	134.4	7.69999e-40	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493667_31	UniRef90_UPI001D0EB55A	56.2	0.00000328	helitron helicase-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1493667_31	1203606.HMPREF1526_01330	122.0	1.34e-31	N/A	N/A
structural_annotation	UHGV-1493667_34	PF20549,MF_00436,NF005100,COG5475	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_40	phrog_2470	58.1	1.3e-16	membrane protein	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-1493667_40	UniRef90_UPI0019236C01	141.0	7.41007e-42	N/A	N/A
eggNOG-mapper	UHGV-1493667_40	649747.HMPREF0083_06229	58.2	0.00000000149	N/A	N/A
Pfam	UHGV-1493667_40	PF11750	N/A	N/A	N/A	DUF3307
UniRef90	UHGV-1493667_42	UniRef90_A0A098GES5	104.0	4e-27	Putative phage associated protein	N/A
structural_annotation	UHGV-1493667_42	PF01423,MF_00257,NF001963,COG1958	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_43	phrog_374	62.3	1e-17	HNH endonuclease	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1493667_43	1235797.C816_00946	57.0	0.0000000444	N/A	N/A
KOfam	UHGV-1493667_44	K03497	73.6	3.7e-22	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1493667_44	phrog_27290	336.7	0	N/A	unknown function
UniRef90	UHGV-1493667_44	UniRef90_UPI00195A3B6D	315.0	0	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-1493667_44	742738.HMPREF9460_00856	246.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-1493667_44	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-1493667_44	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1493667_44	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-1493667_45	K03496	202.6	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-1493667_45	phrog_164	166.1	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493667_45	UniRef90_A0A845R968	254.0	0	ParA family protein	N/A
eggNOG-mapper	UHGV-1493667_45	1226322.HMPREF1545_00097	231.0	0	4Fe-4S iron sulfur cluster binding proteins, NifH/frxC family	N/A
Pfam	UHGV-1493667_45	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-1493667_45	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-1493667_45	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
KOfam	UHGV-1493667_46	K02314	226.7	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-1493667_46	phrog_19	216.4	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493667_46	UniRef90_G4KRS6	329.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-1493667_46	1007096.BAGW01000033_gene1616	335.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-1493667_46	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-1493667_46	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-1493667_46	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-1493667_46	PF03796,PF00772,MF_04155,NF005240,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-1493667_47	phrog_270	97.7	1.5e-28	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1493667_47	UniRef90_UPI001F170B82	157.0	1.23314e-43	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1493667_47	1240350.AMZE01000050_gene909	81.3	0.00000000000000171	N/A	N/A
COG	UHGV-1493667_47	COG3355	N/A	N/A	Predicted transcriptional regulator	N/A
structural_annotation	UHGV-1493667_47	PF04182,NF040939,COG3355	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1493667_49	PF21291,TIGR03070,COG3655	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1493667	Yes	43,639	58	100	1
UHGV-1346103	No	43,935	58	100	1
UHGV-0136769	No	22,553	59	54	1
UHGV-1782364	No	10,004	58	24	1