vOTU vOTU-070303

vOTU: vOTU-070303

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-070303
Number of genomes	3
Taxonomy (ICTV)	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00087 → vGENUS-00253 → vSUBGEN-01457 → vOTU-070303
Host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium
Host range breadth	Genus
Lifestyle	lytic (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1535588
Biosample ID	SAMEA4545366
Genome length (bp)	33,358 bps
CheckV completeness	91.15% (High-quality)
CDS count	49
CDS density	93.85%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium	Total connections	210	Host agreement	96.19
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → Erysipelotrichales → Coprobacillaceae → Catenibacterium → Catenibacterium sp000437715	Total connections	123	Host agreement	75.61

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.15)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1535588_1	K07741	90.7	4.2e-26	antB; anti-repressor protein	N/A
PHROG	UHGV-1535588_1	phrog_9438	151.2	1.4013e-45	anti-repressor	transcription regulation
UniRef90	UHGV-1535588_1	UniRef90_E2NR69	270.0	0	Phage antirepressor protein	N/A
eggNOG-mapper	UHGV-1535588_1	203120.LEUM_1680	191.0	0	AntA/AntB antirepressor	N/A
Pfam	UHGV-1535588_1	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-1535588_1	COG3561	N/A	N/A	Phage anti-repressor protein Ant	N/A
structural_annotation	UHGV-1535588_1	PF03374,COG3645	N/A	N/A	N/A	N/A
UniRef90	UHGV-1535588_2	UniRef90_A0A416DT94	94.0	2.13e-23	DNA-binding protein	N/A
structural_annotation	UHGV-1535588_2	PF12728,TIGR01764,COG3311	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_6	phrog_434	156.7	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535588_6	UniRef90_A0A6N9L4Y3	457.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1535588_6	888055.HMPREF9015_01894	132.0	1.11e-35	YqaJ viral recombinase family	N/A
Pfam	UHGV-1535588_6	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1535588_6	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1535588_6	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1535588_6	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_7	phrog_674	84.2	1.4e-24	N/A	unknown function
UniRef90	UHGV-1535588_7	UniRef90_UPI001C383633	598.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535588_7	445335.CBN_1354	61.6	0.0000000834	N/A	N/A
Pfam	UHGV-1535588_7	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-1535588_7	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-1535588_8	K07455	212.0	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1535588_8	phrog_148	226.8	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535588_8	UniRef90_A0A6N9L4X4	572.0	0	Recombinase	N/A
eggNOG-mapper	UHGV-1535588_8	1095750.HMPREF9970_1675	364.0	0	RecT family	N/A
Pfam	UHGV-1535588_8	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1535588_8	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1535588_8	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1535588_8	PF03837,TIGR00616,COG3723	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_9	phrog_2514	63.4	3.9e-18	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535588_9	UniRef90_UPI001C395B09	224.0	0	winged helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-1535588_9	1140002.I570_01458	61.2	0.000000033	DnaD domain protein	N/A
COG	UHGV-1535588_9	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-1535588_9	PF09681,NF033788,COG0640	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_14	phrog_2245	62.4	7.6e-18	nucleoside triphosphate pyrophosphohydrolase	other
Pfam	UHGV-1535588_14	PF03819	N/A	N/A	MazG nucleotide pyrophosphohydrolase domain	MazG
structural_annotation	UHGV-1535588_14	NF001613,COG1694	N/A	N/A	N/A	N/A
KOfam	UHGV-1535588_17	K03111	144.6	9.79508e-43	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1535588_17	phrog_44	150.3	9.80909e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535588_17	UniRef90_A0A6N9L4V1	259.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1535588_17	428126.CLOSPI_02450	160.0	0	COG COG0629 Single-stranded DNA-binding protein	N/A
Pfam	UHGV-1535588_17	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1535588_17	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1535588_17	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1535588_17	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1535588_17	PF00436,MF_00984,NF005579,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_18	phrog_190	126.2	2.2e-37	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535588_18	UniRef90_A0A6N9L4W3	218.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535588_18	445974.CLORAM_02947	108.0	4.97e-29	N/A	N/A
Pfam	UHGV-1535588_18	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1535588_18	PF06356	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1535588_19	1211844.CBLM010000016_gene1520	59.3	0.00000000978	N/A	N/A
Pfam	UHGV-1535588_19	PF13411	N/A	N/A	MerR HTH family regulatory protein	MerR_1
PHROG	UHGV-1535588_20	phrog_36	47.0	0.00000000000048	transcriptional regulator	transcription regulation
COG	UHGV-1535588_20	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
KOfam	UHGV-1535588_21	K03497	58.5	1.4e-16	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-1535588_21	phrog_940	394.7	0	nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1535588_21	UniRef90_R6DKE7	444.0	0	ParB domain-containing protein	N/A
eggNOG-mapper	UHGV-1535588_21	1232449.BAHV02000018_gene1534	419.0	0	N/A	N/A
PADLOC	UHGV-1535588_21	MTase_II_00015	91.6	1.2e-26	Type II methyltransferase	RM
Pfam	UHGV-1535588_21	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
Pfam	UHGV-1535588_21	PF14386	N/A	N/A	N/A	DUF4417
COG	UHGV-1535588_21	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1535588_21	PF14386,PF02195,TIGR00180	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_24	phrog_9479	137.2	7.39998e-41	N/A	unknown function
structural_annotation	UHGV-1535588_24	PF15529	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_25	phrog_2412	85.0	7.7e-25	N/A	unknown function
UniRef90	UHGV-1535588_25	UniRef90_UPI001C38E948	225.0	0	KGG domain-containing protein	N/A
eggNOG-mapper	UHGV-1535588_25	1125712.HMPREF1316_1524	64.3	0.0000000000178	N/A	N/A
Pfam	UHGV-1535588_25	PF10685	N/A	N/A	Stress-induced bacterial acidophilic repeat motif	KGG
structural_annotation	UHGV-1535588_25	PF18932	N/A	N/A	N/A	N/A
KOfam	UHGV-1535588_26	K06909	366.8	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1535588_26	phrog_3717	166.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1535588_26	UniRef90_A0A6N9L4W9	796.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1535588_26	445974.CLORAM_02936	736.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1535588_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1535588_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1535588_26	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1535588_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1535588_26	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_27	phrog_64	393.4	0	portal protein	head and packaging
UniRef90	UHGV-1535588_27	UniRef90_A0A6N9L3D6	897.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1535588_27	445974.CLORAM_02935	481.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1535588_27	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-1535588_27	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-1535588_27	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_28	phrog_115	319.6	0	minor head protein	head and packaging
UniRef90	UHGV-1535588_28	UniRef90_UPI001C387790	719.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1535588_28	742733.HMPREF9469_01825	275.0	0	Phage head morphogenesis protein, SPP1 gp7 family	N/A
Pfam	UHGV-1535588_28	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1535588_28	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1535588_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1535588_28	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_29	phrog_3675	114.6	3.5e-34	N/A	unknown function
UniRef90	UHGV-1535588_29	UniRef90_A0A0E4H649	119.0	8.87e-33	YjcQ protein	N/A
eggNOG-mapper	UHGV-1535588_29	1120978.KB894082_gene1061	142.0	2.1594e-42	YjcQ protein	N/A
Pfam	UHGV-1535588_29	PF09639	N/A	N/A	YjcQ protein	YjcQ
structural_annotation	UHGV-1535588_29	PF09639,TIGR04176,COG1695	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_30	phrog_30609	66.3	4.9e-19	N/A	unknown function
structural_annotation	UHGV-1535588_30	PF21485	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_31	phrog_172	158.1	0	head scaffolding protein	head and packaging
UniRef90	UHGV-1535588_31	UniRef90_A0A6N9L4V5	290.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535588_31	1211844.CBLM010000016_gene1492	109.0	2.26e-27	N/A	N/A
Pfam	UHGV-1535588_31	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-1535588_31	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_32	phrog_422	298.1	0	major head protein	head and packaging
UniRef90	UHGV-1535588_32	UniRef90_A0A2H4JCM6	301.0	0	Putative capsid protein	N/A
eggNOG-mapper	UHGV-1535588_32	1211844.CBLM010000016_gene1491	308.0	0	N/A	N/A
structural_annotation	UHGV-1535588_32	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_33	phrog_2724	64.6	1.6e-18	N/A	unknown function
UniRef90	UHGV-1535588_33	UniRef90_A0A6N9L4P9	159.0	0	Rho_N domain-containing protein	N/A
Pfam	UHGV-1535588_33	PF07498	N/A	N/A	Rho termination factor, N-terminal domain	Rho_N
COG	UHGV-1535588_33	COG0261	N/A	N/A	Ribosomal protein L21	N/A
structural_annotation	UHGV-1535588_33	PF07498	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_34	phrog_132	40.2	0.00000000005	head-tail adaptor	connector
UniRef90	UHGV-1535588_34	UniRef90_UPI001C101B39	53.9	0.00000037	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-1535588_34	1235800.C819_00483	56.2	0.0000000114	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-1535588_34	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-1535588_34	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_35	phrog_2168	90.9	9.3e-27	N/A	unknown function
eggNOG-mapper	UHGV-1535588_35	1280689.AUJC01000003_gene969	78.6	1.78e-17	N/A	N/A
structural_annotation	UHGV-1535588_35	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_36	phrog_5	58.8	1.2e-16	tail completion or Neck1 protein	connector
UniRef90	UHGV-1535588_36	UniRef90_A0A6N9L3B6	311.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1535588_36	562981.HMPREF0428_01816	108.0	1.33e-27	N/A	N/A
structural_annotation	UHGV-1535588_36	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_37	phrog_78	55.5	0.000000000000001	tail terminator	connector
eggNOG-mapper	UHGV-1535588_37	1235800.C819_00480	141.0	4.31039e-42	N/A	N/A
structural_annotation	UHGV-1535588_37	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_38	phrog_158	71.5	1.5e-20	major tail protein	tail
UniRef90	UHGV-1535588_38	UniRef90_A0A6N9L2K6	259.0	0	Phage tail protein	N/A
eggNOG-mapper	UHGV-1535588_38	445974.CLORAM_02924	172.0	0	Phage tail tube protein, TTP	N/A
Pfam	UHGV-1535588_38	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-1535588_38	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_39	phrog_183	58.2	1.5e-16	tail chaperone protein	tail
UniRef90	UHGV-1535588_39	UniRef90_UPI0011C9B36A	219.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535588_39	445974.CLORAM_02923	116.0	9.38e-32	N/A	N/A
Pfam	UHGV-1535588_39	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-1535588_39	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_40	phrog_1535	317.1	0	tail length tape measure protein	tail
UniRef90	UHGV-1535588_40	UniRef90_A0A6N9L4U2	1466.0	0	Tape measure protein	N/A
eggNOG-mapper	UHGV-1535588_40	650150.ERH_0621	344.0	0	tape measure	N/A
Pfam	UHGV-1535588_40	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-1535588_40	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-1535588_40	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-1535588_41	phrog_1194	84.7	8.5e-25	N/A	unknown function
eggNOG-mapper	UHGV-1535588_41	1504823.CCMM01000008_gene1031	187.0	0	N/A	N/A
Pfam	UHGV-1535588_41	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-1535588_41	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_42	phrog_15074	58.1	3.6e-17	N/A	unknown function
eggNOG-mapper	UHGV-1535588_42	445974.CLORAM_02919	491.0	0	cellulase activity	N/A
COG	UHGV-1535588_42	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
structural_annotation	UHGV-1535588_42	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_43	phrog_30133	115.1	5.7e-34	virion structural protein	head and packaging
UniRef90	UHGV-1535588_43	UniRef90_I7ARM6	298.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535588_43	1504823.CCMM01000008_gene1029	312.0	0	N/A	N/A
structural_annotation	UHGV-1535588_43	PF14874,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_44	phrog_18110	43.3	0.0000000000035	N/A	unknown function
eggNOG-mapper	UHGV-1535588_44	411465.PEPMIC_00746	76.6	0.000000000000423	Prophage endopeptidase tail	N/A
COG	UHGV-1535588_44	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-1535588_45	phrog_372	223.5	0	tail protein	tail
UniRef90	UHGV-1535588_45	UniRef90_UPI0006C32325	1085.0	0	N/A	N/A
eggNOG-mapper	UHGV-1535588_45	1211844.CBLM010000016_gene1479	202.0	0	N/A	N/A
Pfam	UHGV-1535588_45	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-1535588_45	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_46	phrog_199	62.4	5e-18	holin	lysis
UniRef90	UHGV-1535588_46	UniRef90_E2NU60	284.0	0	Toxin secretion/phage lysis holin	N/A
eggNOG-mapper	UHGV-1535588_46	742723.HMPREF9477_00889	195.0	0	Bacteriophage holin family	N/A
Pfam	UHGV-1535588_46	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1535588_46	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1535588_46	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1535588_46	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_47	phrog_918	118.6	1.8e-35	N/A	unknown function
UniRef90	UHGV-1535588_47	UniRef90_UPI00164AB9AF	123.0	5.11e-35	N/A	N/A
eggNOG-mapper	UHGV-1535588_47	1504823.CCMM01000008_gene1021	119.0	2.2e-34	N/A	N/A
Pfam	UHGV-1535588_47	PF19791	N/A	N/A	N/A	DUF6275
structural_annotation	UHGV-1535588_47	PF19791	N/A	N/A	N/A	N/A
PHROG	UHGV-1535588_48	phrog_774	59.2	9.3e-17	N/A	unknown function
eggNOG-mapper	UHGV-1535588_48	397290.C810_05225	79.0	4.04e-18	N/A	N/A
KOfam	UHGV-1535588_49	K01448	129.8	2.7e-38	amiABC; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-1535588_49	phrog_435	197.5	0	endolysin	lysis
UniRef90	UHGV-1535588_49	UniRef90_UPI001EE924D3	429.0	0	N-acetylmuramoyl-L-alanine amidase	N/A
eggNOG-mapper	UHGV-1535588_49	552396.HMPREF0863_00263	195.0	0	hmm pf01520	N/A
Pfam	UHGV-1535588_49	PF01520	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	Amidase_3
COG	UHGV-1535588_49	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-1535588_49	PF01520,PF18342,MF_00417,TIGR02883,COG0860,COG4991	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1535588	Yes	33,358	38	91	1
UHGV-1760341	No	15,516	40	42	1
UHGV-1876851	No	13,629	40	37	1