vOTU vOTU-070695

vOTU: vOTU-070695

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-070695
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00100 → vSUBFAM-00434 → vGENUS-01202 → vSUBGEN-36003 → vOTU-070695
Host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → UBA932 → Cryptobacteroides → Cryptobacteroides sp000435075
Host range breadth	Species
Lifestyle	temperate (evidence: integrase)

Representative genome
Genome ID	UHGV-0032159
Biosample ID	SAMEA4766378
Genome length (bp)	35,939 bps
CheckV completeness	99.05% (High-quality)
CDS count	51
CDS density	86.81%
tRNA count	0
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Bacteroidota → Bacteroidia → Bacteroidales → UBA932 → Cryptobacteroides → Cryptobacteroides sp000435075	Total connections	86	Host agreement	83.72
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.05)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0032159_4	phrog_28898	53.2	0.0000000000000047	N/A	unknown function
eggNOG-mapper	UHGV-0032159_4	411901.BACCAC_01110	61.2	0.0000000018	N/A	N/A
structural_annotation	UHGV-0032159_4	PF21744	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_5	phrog_16490	89.0	4.6e-26	N/A	unknown function
UniRef90	UHGV-0032159_5	UniRef90_A0A8F1B6S5	296.0	0	Outer capsid protein/viral fiber	N/A
eggNOG-mapper	UHGV-0032159_5	762982.HMPREF9442_01201	114.0	5.69e-27	N/A	N/A
eggNOG-mapper	UHGV-0032159_6	445970.ALIPUT_01633	66.2	0.00000000000124	Bacterial dnaA protein helix-turn-helix	N/A
structural_annotation	UHGV-0032159_6	PF08299,NF004688	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032159_7	UniRef90_R6E8J1	132.0	1.79e-37	Putative lipoprotein	N/A
eggNOG-mapper	UHGV-0032159_7	679190.HMPREF0650_1967	53.9	0.000000245	N/A	N/A
KOfam	UHGV-0032159_8	K08640	96.7	3.3e-28	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-0032159_8	phrog_894	90.2	2.5e-26	endolysin	lysis
UniRef90	UHGV-0032159_8	UniRef90_A0A1Y4CAH0	175.0	0	Peptidase_M15_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-0032159_8	1236514.BAKL01000055_gene3885	110.0	5.21e-29	Peptidase M15	N/A
Pfam	UHGV-0032159_8	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-0032159_8	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032159_8	PF08291,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_9	phrog_20732	51.2	0.000000000000018	N/A	unknown function
UniRef90	UHGV-0032159_9	UniRef90_UPI0009352414	155.0	1.4013e-45	phage holin family protein	N/A
eggNOG-mapper	UHGV-0032159_9	484018.BACPLE_02426	135.0	1.87e-38	Bacteriophage holin family	N/A
Pfam	UHGV-0032159_9	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
structural_annotation	UHGV-0032159_9	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0032159_10	1121100.JCM6294_1083	52.8	0.000000347	N/A	N/A
structural_annotation	UHGV-0032159_10	PF10043,NF008028,COG5544	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032159_14	PF14545,TIGR02268	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032159_15	UniRef90_R6E8J8	500.0	0	Ribosomal_L12 domain-containing protein	N/A
eggNOG-mapper	UHGV-0032159_15	742725.HMPREF9450_02124	115.0	1.65e-23	N/A	N/A
structural_annotation	UHGV-0032159_15	PF14594,PF00542,MF_00368,TIGR03361,TIGR00855,COG4379,COG0222	N/A	N/A	N/A	N/A
COG	UHGV-0032159_16	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
PHROG	UHGV-0032159_19	phrog_1407	41.8	0.000000000013	major tail protein	tail
structural_annotation	UHGV-0032159_19	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032159_20	PF16807,NF040576	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_21	phrog_5	51.7	0.000000000000016	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0032159_21	1150474.JQJI01000006_gene802	51.2	0.00000913	N/A	N/A
Pfam	UHGV-0032159_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
structural_annotation	UHGV-0032159_21	PF04883,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032159_22	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0032159_23	PF17900,TIGR02215	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_24	phrog_10	108.2	8e-32	major head protein	head and packaging
UniRef90	UHGV-0032159_24	UniRef90_A0A1V5ID18	131.0	2.02e-30	Phage capsid family protein	N/A
Pfam	UHGV-0032159_24	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0032159_24	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0032159_24	PF05065,PF15188,MF_04133,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0032159_25	K06904	137.0	1.7e-40	N/A	N/A
PHROG	UHGV-0032159_25	phrog_80	136.3	2.8e-40	head maturation protease	head and packaging
UniRef90	UHGV-0032159_25	UniRef90_R6E6C6	330.0	0	Caudovirus prohead protease	N/A
eggNOG-mapper	UHGV-0032159_25	1226322.HMPREF1545_03547	94.7	1.37e-20	Caudovirus prohead serine protease	N/A
Pfam	UHGV-0032159_25	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0032159_25	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0032159_25	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0032159_25	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_26	phrog_2468	91.4	1e-26	head morphogenesis	head and packaging
UniRef90	UHGV-0032159_26	UniRef90_A0A6J5N4D3	82.8	0.00000000000000324	Phage head morphogenesis domain containing protein	N/A
eggNOG-mapper	UHGV-0032159_26	294631.Q5ZGF9_9CAUD	76.3	0.000000000000138	Phage Mu protein F like protein	N/A
structural_annotation	UHGV-0032159_26	PF06152,TIGR01641	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_27	phrog_12	101.0	7.8e-30	portal protein	head and packaging
UniRef90	UHGV-0032159_27	UniRef90_A0A7J5TYC9	82.0	0.000000000000334	Phage portal protein	N/A
eggNOG-mapper	UHGV-0032159_27	742725.HMPREF9450_02103	220.0	0	Portal protein	N/A
Pfam	UHGV-0032159_27	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-0032159_27	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0032159_27	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032159_28	UniRef90_A0A845KIF3	121.0	5.13e-33	N/A	N/A
eggNOG-mapper	UHGV-0032159_28	883096.HMPREF9699_01325	104.0	3.93e-27	N/A	N/A
Pfam	UHGV-0032159_28	PF16476	N/A	N/A	N/A	DUF5053
structural_annotation	UHGV-0032159_28	PF16476	N/A	N/A	N/A	N/A
KOfam	UHGV-0032159_29	K06909	227.1	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0032159_29	phrog_3717	111.9	4.2e-33	terminase large subunit	head and packaging
UniRef90	UHGV-0032159_29	UniRef90_R6F235	624.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0032159_29	742725.HMPREF9450_02102	236.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0032159_29	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0032159_29	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0032159_29	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0032159_29	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0032159_29	PF04466,PF17289,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_30	phrog_15125	67.1	1.8e-19	N/A	unknown function
eggNOG-mapper	UHGV-0032159_30	1347393.HG726020_gene1343	59.7	0.00000000248	N/A	N/A
AcrCatalog	UHGV-0032159_32	cluster_138986	116.0	2.35e-34	NA	N/A
structural_annotation	UHGV-0032159_32	PF17941,MF_01918,NF010490,COG3886	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_33	phrog_21498	260.6	0	N/A	unknown function
UniRef90	UHGV-0032159_33	UniRef90_R6E8L3	702.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0032159_33	469378.Ccur_02830	224.0	0	DNA binding	N/A
Pfam	UHGV-0032159_33	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0032159_33	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0032159_33	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_34	phrog_824	135.5	1.4e-40	N/A	unknown function
UniRef90	UHGV-0032159_34	UniRef90_R6EHM3	266.0	0	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0032159_34	1122985.HMPREF1991_01533	135.0	5.91e-39	VRR-NUC domain	N/A
Pfam	UHGV-0032159_34	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0032159_34	PF08774	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_36	phrog_8470	56.4	1.8e-19	N/A	unknown function
UniRef90	UHGV-0032159_36	UniRef90_UPI00195E2360	240.0	0	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0032159_36	484018.BACPLE_00684	200.0	0	N/A	N/A
Pfam	UHGV-0032159_36	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0032159_36	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_37	phrog_7445	54.4	0.0000000000000021	N/A	unknown function
UniRef90	UHGV-0032159_37	UniRef90_UPI00164C8BA9	82.8	1.2e-18	PcfK-like family protein	N/A
eggNOG-mapper	UHGV-0032159_37	357276.EL88_08470	88.2	1.74e-21	PcfK-like protein	N/A
Pfam	UHGV-0032159_37	PF14058	N/A	N/A	PcfK-like protein	PcfK
PHROG	UHGV-0032159_39	phrog_20542	55.6	0.0000000000000011	N/A	unknown function
eggNOG-mapper	UHGV-0032159_39	216591.BCAM1034	56.2	0.00000000591	N/A	N/A
KOfam	UHGV-0032159_41	K03111	164.9	0	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0032159_41	phrog_44	134.6	6e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032159_41	UniRef90_R6EFS7	194.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0032159_41	1232410.KI421428_gene1074	150.0	9.80909e-45	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0032159_41	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0032159_41	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0032159_41	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0032159_41	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0032159_41	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_42	phrog_16304	83.9	1.9e-24	N/A	unknown function
UniRef90	UHGV-0032159_42	UniRef90_R6E8M4	375.0	0	N/A	N/A
eggNOG-mapper	UHGV-0032159_42	742726.HMPREF9448_02012	89.4	5.14e-18	HNH endonuclease	N/A
Pfam	UHGV-0032159_42	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0032159_42	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0032159_42	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_43	phrog_253	58.7	1.2e-16	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
Pfam	UHGV-0032159_43	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0032159_43	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0032159_44	phrog_155	72.6	5.3e-21	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0032159_44	UniRef90_UPI00167A33BF	183.0	0	ERF family protein	N/A
eggNOG-mapper	UHGV-0032159_44	1327970.R9ZVT8_9CAUD	162.0	0	ERF superfamily	N/A
Pfam	UHGV-0032159_44	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0032159_44	PF04404,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0032159_48	UniRef90_R6EHP5	137.0	1.89e-39	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0032159_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0032159_48	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0032159_51	K04763	59.7	4.4e-17	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0032159_51	phrog_1	69.4	4.6e-20	integrase	integration and excision
UniRef90	UHGV-0032159_51	UniRef90_A0A4Y1WR36	258.0	0	Transposase	N/A
eggNOG-mapper	UHGV-0032159_51	997884.HMPREF1068_03093	256.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0032159_51	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0032159_51	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0032159_51	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0032159_51	PF13102,PF17293,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0032159	Yes	35,939	51	99	1