vOTU vOTU-071098

vOTU: vOTU-071098

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071098
Number of genomes	2
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00001 → vSUBFAM-02040 → vGENUS-09279 → vSUBGEN-10606 → vOTU-071098
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Limivicinus → ERR7738584_bin.110
Host range breadth	Species
Lifestyle	temperate (Evidence: integrase)

Representative genome
Genome ID	UHGV-0039510
Biosample ID	N/A
Genome length (bp)	50,344 bps
CheckV completeness	91.69% (High-quality)
CDS count	76
CDS density	93.50%
tRNA count	1
Integrase	Yes
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Limivicinus → ERR7738584_bin.110	Total connections	1	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.69)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0039510_1	1502770.JQMG01000001_gene2057	48.5	0.000000339	N/A	N/A
KOfam	UHGV-0039510_2	K07727	62.0	1.6e-17	K07727; putative transcriptional regulator	N/A
UniRef90	UHGV-0039510_2	UniRef90_A0A1Y4WC73	137.0	8.27999e-41	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0039510_2	1235802.C823_05610	117.0	1.73e-33	helix-turn-helix	N/A
Pfam	UHGV-0039510_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0039510_2	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
structural_annotation	UHGV-0039510_2	PF13443,NF000090,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039510_3	UniRef90_UPI00137AA8A9	62.8	0.0000000000419	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_3	1408437.JNJN01000040_gene204	72.8	8.44e-16	N/A	N/A
Pfam	UHGV-0039510_3	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-0039510_3	PF13443,NF000090,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039510_6	1321782.HMPREF1986_02245	144.0	5.93996e-41	N/A	N/A
PHROG	UHGV-0039510_7	phrog_3939	64.6	1.5e-18	N/A	unknown function
eggNOG-mapper	UHGV-0039510_7	445972.ANACOL_00207	117.0	2e-33	N/A	N/A
PHROG	UHGV-0039510_8	phrog_4068	77.0	2.7e-22	N/A	unknown function
structural_annotation	UHGV-0039510_8	PF06657	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_9	phrog_38679	68.6	7.2e-20	N/A	unknown function
eggNOG-mapper	UHGV-0039510_10	742738.HMPREF9460_01886	64.3	0.000000000725	N/A	N/A
eggNOG-mapper	UHGV-0039510_11	1094508.Tsac_2409	85.1	8.1e-19	N/A	N/A
Pfam	UHGV-0039510_11	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-0039510_11	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039510_12	UniRef90_UPI001F485105	90.5	6.96e-22	branched-chain amino acid ABC transporter permease	N/A
eggNOG-mapper	UHGV-0039510_12	1232453.BAIF02000013_gene3226	89.0	5.15e-22	N/A	N/A
PHROG	UHGV-0039510_13	phrog_20388	90.9	1.3e-26	endolysin	lysis
UniRef90	UHGV-0039510_13	UniRef90_A0A1Y2AG61	112.0	1.57e-26	Phage_lysozyme2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_13	397290.C810_00440	110.0	6.59e-25	Ami_2	N/A
Pfam	UHGV-0039510_13	PF18013	N/A	N/A	Phage tail lysozyme	Phage_lysozyme2
Pfam	UHGV-0039510_13	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0039510_13	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
structural_annotation	UHGV-0039510_13	PF18013,PF01471,COG3409	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_15	K00986	121.2	1.1e-35	ltrA; RNA-directed DNA polymerase [EC:2.7.7.49]	N/A
PHROG	UHGV-0039510_15	phrog_1423	238.1	0	Reverse transcriptase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_15	UniRef90_A0A2P8EI60	515.0	0	Retron-type reverse transcriptase	N/A
eggNOG-mapper	UHGV-0039510_15	857293.CAAU_0822	277.0	0	Reverse transcriptase (RNA-dependent DNA polymerase)	N/A
PADLOC	UHGV-0039510_15	icity0040	93.2	5.2e-27	RT (reverse transcriptase)	CRISPR-CAS
Pfam	UHGV-0039510_15	PF00078	N/A	N/A	Reverse transcriptase (RNA-dependent DNA polymerase)	RVT_1
COG	UHGV-0039510_15	COG3344	N/A	N/A	Retron-type reverse transcriptase	N/A
PHROG	UHGV-0039510_16	phrog_3206	114.5	4.7e-34	Avd protein of DGR	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_16	UniRef90_A0A3A6EDX2	168.0	0	Diversity-generating retroelement protein Avd	N/A
eggNOG-mapper	UHGV-0039510_16	742740.HMPREF9474_03169	159.0	0	23S rRNA-intervening sequence protein	N/A
Pfam	UHGV-0039510_16	PF05635	N/A	N/A	23S rRNA-intervening sequence protein	23S_rRNA_IVP
NCBIFam	UHGV-0039510_16	NF033474.1	N/A	N/A	diversity-generating retroelement protein Avd	N/A
structural_annotation	UHGV-0039510_16	PF05635,NF033474,COG3781	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_17	phrog_2889	397.2	0	N/A	unknown function
UniRef90	UHGV-0039510_17	UniRef90_A0A414A7V2	438.0	0	FGE-sulfatase domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_17	411483.FAEPRAA2165_01922	419.0	0	Sulfatase-modifying factor enzyme 1	N/A
Pfam	UHGV-0039510_17	PF03781	N/A	N/A	Sulfatase-modifying factor enzyme 1	FGE-sulfatase
COG	UHGV-0039510_17	COG1262	N/A	N/A	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	N/A
structural_annotation	UHGV-0039510_17	PF03781,COG1262	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_18	phrog_8734	98.0	5.5e-30	N/A	unknown function
eggNOG-mapper	UHGV-0039510_18	1235835.C814_01201	93.2	6.13e-23	N/A	N/A
PHROG	UHGV-0039510_19	phrog_9010	93.6	6.6e-28	N/A	unknown function
eggNOG-mapper	UHGV-0039510_19	293826.Amet_2556	72.4	0.000000000000212	N/A	N/A
PHROG	UHGV-0039510_20	phrog_4311	666.6	0	minor head protein	head and packaging
UniRef90	UHGV-0039510_20	UniRef90_A0A1D7MMG1	486.0	0	Prophage_tail domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_20	1033744.CAEL01000029_gene1269	462.0	0	N/A	N/A
Pfam	UHGV-0039510_20	PF06605	N/A	N/A	Prophage endopeptidase tail	Prophage_tail
NCBIFam	UHGV-0039510_20	TIGR01665.1	N/A	N/A	phage tail spike protein	N/A
COG	UHGV-0039510_20	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0039510_20	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_22	phrog_240	90.2	2.1e-26	head protein	head and packaging
eggNOG-mapper	UHGV-0039510_22	1111134.HMPREF1253_0372	108.0	1.7e-28	Belongs to the glycosyl hydrolase 8 (cellulase D) family	N/A
COG	UHGV-0039510_22	COG3405	N/A	N/A	Endo-1,4-beta-D-glucanase Y	N/A
PHROG	UHGV-0039510_23	phrog_33	65.8	1.1e-18	distal tail protein Dit	tail
UniRef90	UHGV-0039510_23	UniRef90_A0A1T5AMQ9	96.7	6.16e-22	Putative phage tail component, N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_23	1111134.HMPREF1253_0373	84.0	8.45e-18	tail component	N/A
Pfam	UHGV-0039510_23	PF05709	N/A	N/A	Phage tail protein RIFT-related domain	Sipho_tail
COG	UHGV-0039510_23	COG4722	N/A	N/A	Phage-related protein YomH	N/A
structural_annotation	UHGV-0039510_23	PF05709,TIGR01633,COG4722	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_24	K23792	46.5	0.00000000000025	MPRIP; myosin phosphatase Rho-interacting protein	N/A
PHROG	UHGV-0039510_24	phrog_13339	365.9	0	tail length tape measure protein	tail
UniRef90	UHGV-0039510_24	UniRef90_UPI00189B6D86	505.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0039510_24	1408437.JNJN01000030_gene1055	438.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0039510_24	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
NCBIFam	UHGV-0039510_24	TIGR01760.1	N/A	N/A	phage tail tape measure protein	N/A
COG	UHGV-0039510_24	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-0039510_24	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039510_25	PF10666	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039510_26	PF11836,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_27	phrog_88	66.1	6.1e-19	major tail protein	tail
UniRef90	UHGV-0039510_27	UniRef90_R5IDR6	188.0	0	Phage major tail protein phi13 family	N/A
eggNOG-mapper	UHGV-0039510_27	349161.Dred_2600	85.5	5.92e-17	N/A	N/A
structural_annotation	UHGV-0039510_27	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_28	K07486	217.1	0	K07486; transposase	N/A
PHROG	UHGV-0039510_28	phrog_2199	257.8	0	transposase	integration and excision
UniRef90	UHGV-0039510_28	UniRef90_A0A6I2RKK4	692.0	0	IS110 family transposase	N/A
eggNOG-mapper	UHGV-0039510_28	1007096.BAGW01000014_gene1108	611.0	0	Transposase	N/A
Pfam	UHGV-0039510_28	PF01548	N/A	N/A	Transposase	DEDD_Tnp_IS110
Pfam	UHGV-0039510_28	PF02371	N/A	N/A	Transposase IS116/IS110/IS902 family	Transposase_20
NCBIFam	UHGV-0039510_28	NF033542.1	N/A	N/A	IS110 family transposase	N/A
COG	UHGV-0039510_28	COG3547	N/A	N/A	Transposase	N/A
structural_annotation	UHGV-0039510_28	PF01548,PF02371,MF_00651,NF033542,COG3547	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039510_29	397290.C810_00425	59.3	0.0000000031	N/A	N/A
structural_annotation	UHGV-0039510_29	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_31	phrog_25	40.3	0.000000000044	head closure Hc1	connector
UniRef90	UHGV-0039510_31	UniRef90_UPI00102FD6ED	102.0	1.66e-25	head-tail adaptor protein	N/A
eggNOG-mapper	UHGV-0039510_31	755731.Clo1100_1167	58.2	0.0000000033	Phage head-tail joining protein	N/A
Pfam	UHGV-0039510_31	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
COG	UHGV-0039510_31	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-0039510_31	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039510_32	TIGR01560	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039510_33	UniRef90_A0A892AQC9	77.0	1.4e-16	Cadherin-like beta sandwich domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_33	689781.AUJX01000031_gene105	68.6	0.00000000000177	phage major tail protein, phi13 family	N/A
Pfam	UHGV-0039510_33	PF12733	N/A	N/A	Cadherin-like beta sandwich domain	Cadherin-like
structural_annotation	UHGV-0039510_33	PF12733	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_34	phrog_10	102.7	4.5e-30	major head protein	head and packaging
UniRef90	UHGV-0039510_34	UniRef90_A0A3D1WLB8	540.0	0	Phage major capsid protein	N/A
eggNOG-mapper	UHGV-0039510_34	235909.GK0531	280.0	0	Phage capsid family	N/A
Pfam	UHGV-0039510_34	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0039510_34	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-0039510_34	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-0039510_34	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_35	phrog_16951	249.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0039510_35	1378168.N510_00640	180.0	0	N/A	N/A
PHROG	UHGV-0039510_36	phrog_12	262.4	0	portal protein	head and packaging
UniRef90	UHGV-0039510_36	UniRef90_A0A3D1WJW7	548.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0039510_36	1403313.AXBR01000002_gene4327	323.0	0	Phage portal protein	N/A
Pfam	UHGV-0039510_36	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0039510_36	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0039510_36	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0039510_36	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_37	phrog_9	369.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0039510_37	UniRef90_A0A2V2G2T2	561.0	0	Terminase large subunit	N/A
eggNOG-mapper	UHGV-0039510_37	1295642.H839_15973	539.0	0	Phage Terminase	N/A
Pfam	UHGV-0039510_37	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-0039510_37	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0039510_37	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0039510_37	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_38	phrog_13845	94.9	4.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-0039510_38	1399942.U3PDR2_9CAUD	93.6	5.43e-23	N/A	N/A
PHROG	UHGV-0039510_39	phrog_144	73.0	4.8e-21	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_39	UniRef90_A0A847K9S2	78.6	4.95e-17	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0039510_39	130478.Q9B0E5_9CAUD	71.2	0.00000000000000751	HNH endonuclease	N/A
Pfam	UHGV-0039510_39	PF01844	N/A	N/A	HNH endonuclease	HNH
KOfam	UHGV-0039510_40	K03497	58.5	1.6e-16	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0039510_40	phrog_2159	195.7	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_40	UniRef90_A0A174TUJ1	276.0	0	Probable chromosome-partitioning protein parB	N/A
eggNOG-mapper	UHGV-0039510_40	1408437.JNJN01000030_gene1069	275.0	0	ParB-like nuclease domain	N/A
Pfam	UHGV-0039510_40	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0039510_40	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0039510_40	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_41	K00390	56.4	4.4e-17	cysH; phosphoadenosine phosphosulfate reductase [EC:1.8.4.8 1.8.4.10]	N/A
PHROG	UHGV-0039510_41	phrog_2302	277.3	0	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0039510_41	UniRef90_A0A2A7AF71	411.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_41	1408437.JNJN01000030_gene1070	416.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0039510_41	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0039510_41	COG3969	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0039510_41	PF01507,MF_00063,NF006327,COG3969	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_42	phrog_620	145.2	9.94922e-44	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_42	UniRef90_UPI0004E2131F	210.0	0	ParB/Srx family N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_42	445972.ANACOL_00173	198.0	0	DNA binding	N/A
PADLOC	UHGV-0039510_42	MTase_II_00015	49.7	0.000000000000077	Type II methyltransferase	RM
Pfam	UHGV-0039510_42	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0039510_42	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0039510_42	PF02195,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_43	phrog_424	50.9	0.00000000000002	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0039510_43	UniRef90_A0A3A9I8I3	258.0	0	PAPS_reduct domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_43	457412.RSAG_01151	248.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
Pfam	UHGV-0039510_43	PF01507	N/A	N/A	Phosphoadenosine phosphosulfate reductase family	PAPS_reduct
COG	UHGV-0039510_43	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-0039510_43	PF01507,MF_00064,TIGR00434,COG0175	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0039510_44	718252.FP2_00810	313.0	0	N/A	N/A
structural_annotation	UHGV-0039510_44	PF00474,MF_01426,TIGR00912,COG0591	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_45	phrog_36	43.2	0.0000000000076	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0039510_46	445972.ANACOL_00168	47.0	0.00000444	N/A	N/A
eggNOG-mapper	UHGV-0039510_48	1232449.BAHV02000016_gene1829	134.0	1.44e-38	N/A	N/A
PHROG	UHGV-0039510_50	phrog_22543	43.1	0.0000000000081	N/A	unknown function
UniRef90	UHGV-0039510_50	UniRef90_UPI00164C2CD3	57.8	0.00000000546	zinc finger domain-containing protein	N/A
KOfam	UHGV-0039510_53	K03497	150.0	2.24208e-44	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0039510_53	phrog_6218	247.4	0	ParB-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_53	UniRef90_A0A3D4MXA3	644.0	0	Chromosome partitioning protein ParB	N/A
eggNOG-mapper	UHGV-0039510_53	394503.Ccel_3306	375.0	0	Belongs to the ParB family	N/A
Pfam	UHGV-0039510_53	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
NCBIFam	UHGV-0039510_53	TIGR00180.1	N/A	N/A	ParB/RepB/Spo0J family partition protein	N/A
COG	UHGV-0039510_53	COG0710	N/A	N/A	3-dehydroquinate dehydratase	N/A
structural_annotation	UHGV-0039510_53	PF02195,PF18579,MF_02015,TIGR00180,COG1475	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_54	phrog_323	67.3	1e-28	endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_54	UniRef90_UPI001C01CFF8	520.0	0	SANT/Myb domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_54	445972.ANACOL_00160	530.0	0	SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains	N/A
Pfam	UHGV-0039510_54	PF13921	N/A	N/A	Myb-like DNA-binding domain	Myb_DNA-bind_6
dbAPIS	UHGV-0039510_54	APIS006	N/A	N/A	Trigger programmed cell death (PCD) by P4 prophage.	N/A
structural_annotation	UHGV-0039510_54	PF11112,NF040595	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_55	K03427	48.2	0.00000000000013	hsdM; type I restriction enzyme M protein [EC:2.1.1.72]	N/A
PHROG	UHGV-0039510_55	phrog_5696	305.7	0	N/A	unknown function
UniRef90	UHGV-0039510_55	UniRef90_A0A415ZKZ6	402.0	0	SAM-dependent DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0039510_55	445972.ANACOL_00159	381.0	0	N-6 DNA Methylase	N/A
Pfam	UHGV-0039510_55	PF02384	N/A	N/A	N-6 DNA Methylase	N6_Mtase
COG	UHGV-0039510_55	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
structural_annotation	UHGV-0039510_55	COG0286	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_56	K03554	41.5	0.000000000011	rdgC; recombination associated protein RdgC	N/A
PHROG	UHGV-0039510_56	phrog_36563	239.9	0	N/A	unknown function
UniRef90	UHGV-0039510_56	UniRef90_A0A845SWS4	240.0	0	Ftsk_gamma domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_56	445972.ANACOL_00157	242.0	0	ftsk spoiiie	N/A
Pfam	UHGV-0039510_56	PF09397	N/A	N/A	Ftsk gamma domain	FtsK_gamma
COG	UHGV-0039510_56	COG1674	N/A	N/A	DNA segregation ATPase FtsK/SpoIIIE or related protein	N/A
structural_annotation	UHGV-0039510_56	PF09397,MF_01586,NF006814,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_57	K03700	95.8	5.8e-28	recU; recombination protein U	N/A
PHROG	UHGV-0039510_57	phrog_843	148.9	1.82169e-44	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_57	UniRef90_R6MQX5	228.0	0	Holliday junction resolvase RecU	N/A
eggNOG-mapper	UHGV-0039510_57	445972.ANACOL_00156	213.0	0	Endonuclease that resolves Holliday junction intermediates in genetic recombination. Cleaves mobile four-strand junctions by introducing symmetrical nicks in paired strands. Promotes annealing of linear ssDNA with homologous dsDNA. Required for DNA repair, homologous recombination and chromosome segregation	N/A
Pfam	UHGV-0039510_57	PF03838	N/A	N/A	Recombination protein U	RecU
COG	UHGV-0039510_57	COG3331	N/A	N/A	Penicillin-binding protein-related factor A, putative recombinase	N/A
structural_annotation	UHGV-0039510_57	PF03838,MF_00130,NF002581,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_59	K01449	43.3	0.0000000000039	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0039510_59	phrog_30550	71.4	1.2e-20	N/A	unknown function
UniRef90	UHGV-0039510_59	UniRef90_UPI001486382B	80.9	0.00000000000000165	cell wall hydrolase	N/A
Pfam	UHGV-0039510_59	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0039510_59	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
PHROG	UHGV-0039510_60	phrog_9804	138.3	4.30002e-41	N/A	unknown function
UniRef90	UHGV-0039510_60	UniRef90_A0A3D1LDS2	145.0	7.20996e-41	Inhibitor_G39P domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_60	1121344.JHZO01000003_gene981	154.0	5.60519e-45	Loader and inhibitor of phage G40P	N/A
Pfam	UHGV-0039510_60	PF11417	N/A	N/A	Loader and inhibitor of phage G40P	Inhibitor_G39P
structural_annotation	UHGV-0039510_60	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_61	phrog_10469	157.5	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_61	UniRef90_A0A2V2FW01	260.0	0	Phage_rep_org_N domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_61	718252.FP2_01000	205.0	0	N/A	N/A
Pfam	UHGV-0039510_61	PF09681	N/A	N/A	N-terminal phage replisome organiser (Phage_rep_org_N)	Phage_rep_org_N
COG	UHGV-0039510_61	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
KOfam	UHGV-0039510_62	K03111	133.0	3.3e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0039510_62	phrog_44	141.4	5.20022e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_62	UniRef90_A0A847C6L7	189.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0039510_62	877414.ATWA01000008_gene232	176.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0039510_62	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0039510_62	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0039510_62	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0039510_62	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0039510_62	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_64	phrog_72	54.7	0.0000000000000016	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0039510_64	445972.ANACOL_00148	99.0	1.16e-23	N/A	N/A
UniRef90	UHGV-0039510_65	UniRef90_A0A7X5DCB3	100.0	8.73e-23	PDDEXK_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_65	445972.ANACOL_00147	253.0	0	N/A	N/A
structural_annotation	UHGV-0039510_65	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_66	phrog_124	131.4	5.8e-39	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0039510_66	UniRef90_A0A3E3II12	529.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0039510_66	445972.ANACOL_00146	516.0	0	AAA domain	N/A
Pfam	UHGV-0039510_66	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0039510_66	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-0039510_66	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
PHROG	UHGV-0039510_67	phrog_28990	134.5	2.4e-40	N/A	unknown function
PHROG	UHGV-0039510_68	phrog_3777	83.5	1.4e-24	N/A	unknown function
UniRef90	UHGV-0039510_68	UniRef90_A0A417F883	209.0	0	N/A	N/A
eggNOG-mapper	UHGV-0039510_68	411462.DORLON_00813	75.5	7.73e-16	N/A	N/A
Pfam	UHGV-0039510_68	PF12957	N/A	N/A	N/A	DUF3846
structural_annotation	UHGV-0039510_68	PF12957	N/A	N/A	N/A	N/A
UniRef90	UHGV-0039510_72	UniRef90_UPI0006BB88BC	72.8	0.00000000000000198	N/A	N/A
Pfam	UHGV-0039510_72	PF05339	N/A	N/A	N/A	DUF739
structural_annotation	UHGV-0039510_72	PF05339,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_73	K22300	69.1	8e-20	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0039510_73	phrog_8	60.1	5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0039510_73	UniRef90_A0A1Y4RHB8	82.8	1.47e-18	HTH cro/C1-type domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0039510_73	596329.HMPREF0631_1344	77.0	0.00000000000000205	Represses a number of genes involved in the response to DNA damage (SOS response), including recA and lexA. In the presence of single-stranded DNA, RecA interacts with LexA causing an autocatalytic cleavage which disrupts the DNA-binding part of LexA, leading to derepression of the SOS regulon and eventually DNA repair	N/A
Pfam	UHGV-0039510_73	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0039510_73	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0039510_73	PF13560,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0039510_75	K22300	61.9	6.8e-32	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0039510_75	phrog_8	57.3	1.9e-32	transcriptional regulator	transcription regulation
UniRef90	UHGV-0039510_75	UniRef90_UPI000690CA08	98.2	4.02e-23	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0039510_75	718252.FP2_01140	96.7	1.4e-22	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0039510_75	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0039510_75	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
KOfam	UHGV-0039510_76	K06400	370.3	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0039510_76	phrog_95	364.0	0	integrase	integration and excision
UniRef90	UHGV-0039510_76	UniRef90_A0A1C6CZ75	617.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0039510_76	445972.ANACOL_00133	570.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0039510_76	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0039510_76	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0039510_76	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0039510_76	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0039510_76	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0039510	Yes	50,344	49	92	1
UHGV-0040862	No	33,313	49	61	1