vOTU vOTU-071356

vOTU: vOTU-071356

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071356
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00094 → vGENUS-00214 → vSUBGEN-12473 → vOTU-071356
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1459731
Biosample ID	N/A
Genome length (bp)	34,608 bps
CheckV completeness	94.13% (High-quality)
CDS count	60
CDS density	94.15%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	760	Host agreement	96.05
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	17	Host agreement	76.47

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.13)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1459731_4	UniRef90_A0A8F0WD75	79.7	0.00000000000000143	RNA polymerase sigma factor/Ubiquitin-like protein	N/A
eggNOG-mapper	UHGV-1459731_4	1378168.N510_03079	68.9	0.00000000000757	N/A	N/A
KOfam	UHGV-1459731_5	K06400	377.7	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1459731_5	phrog_95	364.7	0	integrase	integration and excision
UniRef90	UHGV-1459731_5	UniRef90_UPI00189960B8	506.0	0	recombinase family protein	N/A
eggNOG-mapper	UHGV-1459731_5	1235835.C814_00825	410.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-1459731_5	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-1459731_5	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1459731_5	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1459731_5	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1459731_5	PF07508,PF00239,NF041201,COG1961	N/A	N/A	N/A	N/A
Pfam	UHGV-1459731_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1459731_6	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1459731_6	PF12844,MF_00535,NF041677,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1459731_7	1121924.ATWH01000011_gene257	86.7	7.35e-16	TM2 domain	N/A
COG	UHGV-1459731_7	COG2314	N/A	N/A	N/A	N/A
KOfam	UHGV-1459731_9	K22300	53.3	0.0000000000000063	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
UniRef90	UHGV-1459731_9	UniRef90_A0A1Y4L0A2	130.0	1.14e-36	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1459731_9	748224.HMPREF9436_01444	110.0	3.62e-29	N/A	N/A
Pfam	UHGV-1459731_9	PF12844	N/A	N/A	Helix-turn-helix domain	HTH_19
COG	UHGV-1459731_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1459731_9	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_12	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_16	PF05082	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_20	phrog_424	77.4	1.7e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1459731_20	445972.ANACOL_01819	494.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1459731_20	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1459731_20	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
Pfam	UHGV-1459731_21	PF04448	N/A	N/A	N/A	DUF551
structural_annotation	UHGV-1459731_21	NF041588	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_22	phrog_3136	128.5	2.6e-38	N/A	unknown function
UniRef90	UHGV-1459731_22	UniRef90_A0A3D0HBD2	105.0	4.47e-26	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1459731_22	642492.Clole_1416	73.2	0.0000000000000109	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
Pfam	UHGV-1459731_22	PF04266	N/A	N/A	ASCH domain	ASCH
COG	UHGV-1459731_22	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1459731_22	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459731_24	UniRef90_A0A8D9PDT5	51.6	0.00000307	Hydrogenase/urease nickel incorporation protein	N/A
PHROG	UHGV-1459731_25	phrog_190	103.4	2.2e-30	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459731_25	UniRef90_UPI0006C2AC63	129.0	2.21e-35	N/A	N/A
eggNOG-mapper	UHGV-1459731_25	693746.OBV_25250	114.0	1.55e-30	N/A	N/A
Pfam	UHGV-1459731_25	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-1459731_25	PF06356	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_27	PF10013	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_29	phrog_2245	88.2	8.1e-26	nucleoside triphosphate pyrophosphohydrolase	other
UniRef90	UHGV-1459731_29	UniRef90_A0A844JSD9	63.2	0.000000000186	MazG domain-containing protein	N/A
eggNOG-mapper	UHGV-1459731_29	706433.HMPREF9430_01279	60.5	0.000000000401	N/A	N/A
PHROG	UHGV-1459731_32	phrog_3584	112.8	2.5e-33	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1459731_32	537013.CLOSTMETH_02141	70.9	0.0000000000034	N/A	N/A
structural_annotation	UHGV-1459731_32	PF21578,MF_00360	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1459731_33	1297617.JPJD01000059_gene2640	80.1	2.28e-17	N/A	N/A
structural_annotation	UHGV-1459731_33	PF06530,TIGR01636	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_34	phrog_119	48.6	0.00000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1459731_34	UniRef90_A0A174XSZ8	125.0	5.87e-35	Prophage LambdaBa04, GP54	N/A
eggNOG-mapper	UHGV-1459731_34	1235793.C809_01915	118.0	9.94e-33	HNH endonuclease	N/A
Pfam	UHGV-1459731_34	PF01844	N/A	N/A	HNH endonuclease	HNH
COG	UHGV-1459731_34	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
PHROG	UHGV-1459731_35	phrog_1066	130.6	5.4e-39	N/A	unknown function
eggNOG-mapper	UHGV-1459731_35	1382358.JHVN01000024_gene1703	123.0	9.62e-35	N/A	N/A
structural_annotation	UHGV-1459731_35	PF05119,TIGR01558	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_36	phrog_9	380.3	0	terminase large subunit	head and packaging
UniRef90	UHGV-1459731_36	UniRef90_A0A1Y3W5R1	784.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1459731_36	1203606.HMPREF1526_00981	735.0	0	Terminase	N/A
Pfam	UHGV-1459731_36	PF03354	N/A	N/A	Terminase large subunit, ATPase domain	TerL_ATPase
Pfam	UHGV-1459731_36	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-1459731_36	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-1459731_36	PF20441,PF03354,MF_04145,TIGR01547,COG4626	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_37	phrog_12	179.2	0	portal protein	head and packaging
UniRef90	UHGV-1459731_37	UniRef90_C4GAS6	505.0	0	Putative phage portal protein, HK97 family	N/A
eggNOG-mapper	UHGV-1459731_37	626523.GCWU000342_01027	505.0	0	Portal protein	N/A
Pfam	UHGV-1459731_37	PF04860	N/A	N/A	Phage portal protein	Phage_portal
COG	UHGV-1459731_37	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-1459731_37	PF04860,MF_04135,TIGR01537,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-1459731_38	K01358	130.0	2.6e-38	clpP, CLPP; ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]	N/A
PHROG	UHGV-1459731_38	phrog_94	200.0	0	head maturation protease	head and packaging
UniRef90	UHGV-1459731_38	UniRef90_R9TLM7	204.0	0	Peptidase S14 ClpP	N/A
eggNOG-mapper	UHGV-1459731_38	1280689.AUJC01000011_gene1520	192.0	0	Belongs to the peptidase S14 family	N/A
Pfam	UHGV-1459731_38	PF00574	N/A	N/A	Clp protease	CLP_protease
COG	UHGV-1459731_38	COG0740	N/A	N/A	ATP-dependent protease ClpP, protease subunit	N/A
structural_annotation	UHGV-1459731_38	PF00574,MF_00444,NF011090,COG0740	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_39	phrog_10	182.3	0	major head protein	head and packaging
UniRef90	UHGV-1459731_39	UniRef90_UPI00189AE5FE	402.0	0	phage major capsid protein	N/A
eggNOG-mapper	UHGV-1459731_39	1280689.AUJC01000011_gene1521	388.0	0	Phage major capsid protein, HK97 family	N/A
Pfam	UHGV-1459731_39	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-1459731_39	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
COG	UHGV-1459731_39	COG4653	N/A	N/A	Predicted phage phi-C31 gp36 major capsid-like protein	N/A
structural_annotation	UHGV-1459731_39	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_40	phrog_5223	45.8	0.00000000000078	neck protein	connector
UniRef90	UHGV-1459731_40	UniRef90_B6W9Y5	61.6	0.000000000257	Putative phage DNA packaging protein	N/A
eggNOG-mapper	UHGV-1459731_40	561177.ANHYDRO_01411	61.6	0.0000000000431	N/A	N/A
PHROG	UHGV-1459731_41	phrog_1951	77.8	9e-23	head-tail adaptor	connector
UniRef90	UHGV-1459731_41	UniRef90_UPI001B02B074	66.6	0.00000000000322	phage head closure protein	N/A
eggNOG-mapper	UHGV-1459731_41	1094508.Tsac_2422	57.8	0.00000000181	Phage head-tail joining protein	N/A
Pfam	UHGV-1459731_41	PF05521	N/A	N/A	Phage head-tail joining protein	Phage_H_T_join
NCBIFam	UHGV-1459731_41	TIGR01563.1	N/A	N/A	phage head closure protein	N/A
COG	UHGV-1459731_41	COG5614	N/A	N/A	Phage head-tail adaptor	N/A
structural_annotation	UHGV-1459731_41	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1459731_42	1487921.DP68_11350	59.7	0.000000000395	N/A	N/A
structural_annotation	UHGV-1459731_42	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_43	phrog_5	40.4	0.000000000067	tail completion or Neck1 protein	connector
structural_annotation	UHGV-1459731_43	TIGR01725	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_44	phrog_88	83.0	3.6e-24	major tail protein	tail
UniRef90	UHGV-1459731_44	UniRef90_S0FUN2	115.0	4.73e-29	Phage major tail protein, phi13 family	N/A
eggNOG-mapper	UHGV-1459731_44	1195236.CTER_5106	115.0	7.93e-30	phage major tail protein, phi13 family	N/A
NCBIFam	UHGV-1459731_44	TIGR01603.1	N/A	N/A	major tail protein	N/A
COG	UHGV-1459731_44	COG5492	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_44	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_45	PF11836	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_46	phrog_33680	150.3	8.40779e-45	N/A	unknown function
UniRef90	UHGV-1459731_46	UniRef90_A0A1M6L1P7	255.0	0	Phage-related minor tail protein	N/A
eggNOG-mapper	UHGV-1459731_46	1195236.CTER_5104	248.0	0	nuclear chromosome segregation	N/A
COG	UHGV-1459731_46	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1459731_46	TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_47	phrog_37549	75.0	9.2e-25	virion structural protein	head and packaging
UniRef90	UHGV-1459731_47	UniRef90_A0A3D0W045	221.0	0	Fibronectin type-III domain-containing protein	N/A
eggNOG-mapper	UHGV-1459731_47	1195236.CTER_5103	124.0	1.03e-26	N/A	N/A
structural_annotation	UHGV-1459731_47	PF02010,PF06848,PF19266,MF_04116,NF033679,NF032891,TIGR01633,TIGR04488,COG3401,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_48	phrog_26795	127.8	6e-38	N/A	unknown function
UniRef90	UHGV-1459731_48	UniRef90_A0A5J6T4K8	134.0	2.17e-32	Minor tail protein	N/A
eggNOG-mapper	UHGV-1459731_48	1195236.CTER_5102	135.0	1.29e-33	N/A	N/A
structural_annotation	UHGV-1459731_48	PF14594,NF033848,COG4379	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_49	PF18614,MF_00085,NF003076	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_50	PF10651	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1459731_51	411471.SUBVAR_06929	312.0	0	ATPase involved in DNA repair	N/A
COG	UHGV-1459731_51	COG0419	N/A	N/A	DNA repair exonuclease SbcCD ATPase subunit	N/A
PHROG	UHGV-1459731_52	phrog_37900	327.9	0	N/A	unknown function
UniRef90	UHGV-1459731_52	UniRef90_UPI001C3EA4DF	351.0	0	N/A	N/A
eggNOG-mapper	UHGV-1459731_52	552398.HMPREF0866_03098	258.0	0	N/A	N/A
Pfam	UHGV-1459731_52	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1459731_52	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1459731_52	PF19789	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_53	phrog_29409	41.6	0.000000000012	N/A	unknown function
structural_annotation	UHGV-1459731_55	PF14600	N/A	N/A	N/A	N/A
PHROG	UHGV-1459731_58	phrog_6918	96.5	1.7e-28	holin	lysis
UniRef90	UHGV-1459731_58	UniRef90_A0A316QCY7	101.0	7e-26	Holin	N/A
eggNOG-mapper	UHGV-1459731_58	1297617.JPJD01000020_gene301	100.0	4.89e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1459731_58	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1459731_58	PF09682,TIGR01673	N/A	N/A	N/A	N/A
UniRef90	UHGV-1459731_59	UniRef90_UPI00164EA432	226.0	0	SH3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1459731_59	525254.HMPREF0072_1273	217.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1459731_59	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1459731_59	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1459731_60	PF13412,MF_00674,COG1342	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1459731	Yes	34,608	58	94	1