vOTU vOTU-071520

vOTU: vOTU-071520

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071520
Number of genomes	5
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00033 → vGENUS-07035 → vSUBGEN-43727 → vOTU-071520
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium sp900539945
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1304911
Biosample ID	SAMEA3951609
Genome length (bp)	35,001 bps
CheckV completeness	99.80% (High-quality)
CDS count	49
CDS density	92.54%
tRNA count	3
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium sp900539945	Total connections	44	Host agreement	77.27
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Ruminococcaceae → Faecalibacterium → Faecalibacterium sp900539945	Total connections	54	Host agreement	81.48

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.8)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-1304911_1	748224.HMPREF9436_03339	95.9	9.4e-22	N/A	N/A
Pfam	UHGV-1304911_1	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1304911_1	COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1304911_2	748224.HMPREF9436_03336	124.0	3.8e-33	Phage minor structural protein GP20	N/A
KOfam	UHGV-1304911_3	K14059	154.7	1.4013e-45	int; integrase	N/A
PHROG	UHGV-1304911_3	phrog_1	138.6	5.90003e-41	integrase	integration and excision
UniRef90	UHGV-1304911_3	UniRef90_A0A2A7AII9	680.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1304911_3	748224.HMPREF9436_03382	323.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1304911_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1304911_3	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1304911_3	PF00589,PF14659,MF_01808,NF007246,COG4973	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1304911_4	748224.HMPREF9436_01443	590.0	0	vancomycin resistance protein	N/A
COG	UHGV-1304911_4	COG2720	N/A	N/A	Vancomycin resistance protein YoaR (function unknown), contains peptidoglycan-binding and VanW domains	N/A
KOfam	UHGV-1304911_6	K18830	70.9	2e-20	pezA; HTH-type transcriptional regulator / antitoxin PezA	N/A
PHROG	UHGV-1304911_6	phrog_8	59.5	3e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1304911_6	UniRef90_A0A564SVW9	213.0	0	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-1304911_6	748224.HMPREF9436_01444	190.0	0	N/A	N/A
Pfam	UHGV-1304911_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1304911_6	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1304911_6	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1304911_8	PF13601,MF_01819,TIGR03433,COG1695	N/A	N/A	N/A	N/A
UniRef90	UHGV-1304911_10	UniRef90_A0A2A7BGV7	80.1	4.39e-18	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-1304911_10	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
structural_annotation	UHGV-1304911_10	PF05339,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1304911_13	PF07875,TIGR02501	N/A	N/A	N/A	N/A
UniRef90	UHGV-1304911_16	UniRef90_UPI001D0E65C2	163.0	0	N/A	N/A
structural_annotation	UHGV-1304911_16	PF12957	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_17	phrog_1733	65.7	3e-19	N/A	unknown function
eggNOG-mapper	UHGV-1304911_17	665956.HMPREF1032_03597	189.0	0	DNA binding	N/A
COG	UHGV-1304911_17	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-1304911_17	PF03677	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_19	phrog_1366	239.1	0	N/A	unknown function
UniRef90	UHGV-1304911_19	UniRef90_R6S946	320.0	0	AAA domain-containing protein	N/A
eggNOG-mapper	UHGV-1304911_19	748224.HMPREF9436_01458	502.0	0	AAA domain	N/A
Pfam	UHGV-1304911_19	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1304911_19	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-1304911_19	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1304911_20	PF03838,MF_00130,TIGR00648,COG3331	N/A	N/A	N/A	N/A
KOfam	UHGV-1304911_21	K18959	208.1	0	uvsW; ATP-dependent DNA helicase UvsW [EC:5.6.2.4]	N/A
PHROG	UHGV-1304911_21	phrog_16	207.8	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1304911_21	UniRef90_E2ZIG6	780.0	0	Helicase C-terminal domain protein	N/A
eggNOG-mapper	UHGV-1304911_21	748224.HMPREF9436_01460	780.0	0	Type III restriction protein res subunit	N/A
PADLOC	UHGV-1304911_21	mREase_IV_00004	45.7	0.00000000000046	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-1304911_21	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-1304911_21	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-1304911_21	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-1304911_21	PF04851,PF16203,MF_01489,TIGR00603,COG1061	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1304911_22	1382304.JNIL01000001_gene3512	56.2	0.00000012	N/A	N/A
structural_annotation	UHGV-1304911_22	PF05037	N/A	N/A	N/A	N/A
KOfam	UHGV-1304911_23	K06919	117.4	1.2e-34	K06919; putative DNA primase/helicase	N/A
PHROG	UHGV-1304911_23	phrog_1829	689.2	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1304911_23	UniRef90_E2ZIG8	1328.0	0	Nucleoside triphosphatase, D5 family	N/A
eggNOG-mapper	UHGV-1304911_23	748224.HMPREF9436_01462	1328.0	0	Phage plasmid primase, P4 family	N/A
Pfam	UHGV-1304911_23	PF08706	N/A	N/A	D5 N terminal like	D5_N
Pfam	UHGV-1304911_23	PF19263	N/A	N/A	N/A	DUF5906
Pfam	UHGV-1304911_23	PF03288	N/A	N/A	Poxvirus D5 protein-like	Pox_D5
NCBIFam	UHGV-1304911_23	TIGR01613.1	N/A	N/A	phage/plasmid primase, P4 family	N/A
COG	UHGV-1304911_23	COG3378	N/A	N/A	DNA primase, phage- or plasmid-associated	N/A
structural_annotation	UHGV-1304911_23	PF08706,PF05272,PF02257,MF_04000,NF011296,COG3378,COG4983	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_24	phrog_36	60.4	3.8e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-1304911_24	UniRef90_A0A3E2U224	120.0	2.43e-32	Sigma70_r4_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-1304911_24	748224.HMPREF9436_01463	243.0	0	N/A	N/A
structural_annotation	UHGV-1304911_24	PF04545,MF_00674,NF009180,COG1342	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_25	phrog_2412	89.4	3.8e-26	N/A	unknown function
UniRef90	UHGV-1304911_25	UniRef90_UPI000DE85101	68.2	0.00000000000596	stress-induced protein	N/A
eggNOG-mapper	UHGV-1304911_25	742738.HMPREF9460_02504	114.0	8.14e-31	N/A	N/A
KOfam	UHGV-1304911_26	K06909	81.8	1e-23	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1304911_26	phrog_2	117.0	2.9e-34	terminase large subunit	head and packaging
UniRef90	UHGV-1304911_26	UniRef90_A0A844EGH8	758.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1304911_26	1449050.JNLE01000003_gene3895	395.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1304911_26	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1304911_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1304911_26	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_27	phrog_533	273.5	0	portal protein	head and packaging
UniRef90	UHGV-1304911_27	UniRef90_A0A7G9WF85	366.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-1304911_27	718252.FP2_06700	870.0	0	N/A	N/A
structural_annotation	UHGV-1304911_27	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_28	phrog_581	354.7	0	minor head protein	head and packaging
UniRef90	UHGV-1304911_28	UniRef90_UPI001C0164DE	958.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1304911_28	718252.FP2_06690	649.0	0	N/A	N/A
Pfam	UHGV-1304911_28	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1304911_28	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1304911_28	PF06152,PF12106	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_29	phrog_27009	48.7	0.00000000000012	N/A	unknown function
PHROG	UHGV-1304911_30	phrog_194	76.5	4.6e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-1304911_30	UniRef90_D4K444	286.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-1304911_30	748224.HMPREF9436_03336	236.0	0	Phage minor structural protein GP20	N/A
Pfam	UHGV-1304911_30	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-1304911_30	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_31	phrog_267	67.3	1.9e-19	major head protein	head and packaging
UniRef90	UHGV-1304911_31	UniRef90_A0A0D8J2H9	347.0	0	p22 coat protein 5	N/A
eggNOG-mapper	UHGV-1304911_31	718252.FP2_06660	452.0	0	N/A	N/A
structural_annotation	UHGV-1304911_31	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_32	phrog_541	85.1	6.9e-25	head-tail adaptor	connector
PHROG	UHGV-1304911_33	phrog_3366	110.3	1.4e-32	N/A	unknown function
Pfam	UHGV-1304911_33	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1304911_33	PF20536	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_34	phrog_556	94.9	5.3e-28	minor head protein	head and packaging
UniRef90	UHGV-1304911_34	UniRef90_UPI000B10EF5E	276.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1304911_34	718252.FP2_06630	259.0	0	Minor capsid protein	N/A
Pfam	UHGV-1304911_34	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1304911_34	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_35	phrog_3266	138.4	2.50006e-41	tail completion	connector
UniRef90	UHGV-1304911_35	UniRef90_UPI001178914F	82.0	4.1e-17	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-1304911_35	748224.HMPREF9436_03331	221.0	0	N/A	N/A
structural_annotation	UHGV-1304911_35	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_36	phrog_820	101.9	4.5e-30	major tail protein	tail
eggNOG-mapper	UHGV-1304911_36	748224.HMPREF9436_03330	260.0	0	N/A	N/A
structural_annotation	UHGV-1304911_36	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_37	phrog_4450	138.5	1.99993e-41	N/A	unknown function
structural_annotation	UHGV-1304911_37	PF20378	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_38	phrog_706	121.8	4.9e-36	N/A	unknown function
UniRef90	UHGV-1304911_38	UniRef90_E2ZNP9	254.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1304911_38	748224.HMPREF9436_03328	254.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1304911_38	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1304911_38	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_39	phrog_28775	917.4	0	tail length tape measure protein	tail
UniRef90	UHGV-1304911_39	UniRef90_A0A2J4JRN1	946.0	0	TMP_3 domain-containing protein	N/A
eggNOG-mapper	UHGV-1304911_39	748224.HMPREF9436_03326	343.0	0	Phage tail tape measure protein, TP901 family	N/A
Pfam	UHGV-1304911_39	PF20155	N/A	N/A	Tape measure protein	TMP_3
COG	UHGV-1304911_39	COG5283	N/A	N/A	Phage-related tail protein	N/A
structural_annotation	UHGV-1304911_39	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_40	phrog_36410	42.9	0.000000000006	N/A	unknown function
UniRef90	UHGV-1304911_40	UniRef90_UPI00130E98E0	295.0	0	phage tail family protein	N/A
eggNOG-mapper	UHGV-1304911_40	748224.HMPREF9436_03325	461.0	0	Phage tail protein	N/A
structural_annotation	UHGV-1304911_40	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_41	phrog_538	184.1	0	minor tail protein	tail
UniRef90	UHGV-1304911_41	UniRef90_UPI001899858F	103.0	2.34e-21	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-1304911_41	748224.HMPREF9436_03324	607.0	0	N/A	N/A
Pfam	UHGV-1304911_41	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-1304911_41	PF14594,TIGR01665,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_42	phrog_9534	266.0	0	head protein	head and packaging
eggNOG-mapper	UHGV-1304911_42	748224.HMPREF9436_03323	276.0	0	COG NOG18825 non supervised orthologous group	N/A
structural_annotation	UHGV-1304911_42	PF21567	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_43	phrog_1382	44.2	0.0000000000019	N/A	unknown function
UniRef90	UHGV-1304911_43	UniRef90_A0A3A9ETQ1	48.1	0.00000197	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1304911_43	1140002.I570_03996	47.4	0.000000678	N/A	N/A
NCBIFam	UHGV-1304911_43	NF040910.1	N/A	N/A	CD1375 family protein	N/A
KOfam	UHGV-1304911_44	K08640	89.2	8.4e-26	E3.4.17.14; zinc D-Ala-D-Ala carboxypeptidase [EC:3.4.17.14]	N/A
PHROG	UHGV-1304911_44	phrog_894	92.4	6.1e-27	endolysin	lysis
UniRef90	UHGV-1304911_44	UniRef90_UPI001C038E43	225.0	0	D-Ala-D-Ala carboxypeptidase family metallohydrolase	N/A
eggNOG-mapper	UHGV-1304911_44	748224.HMPREF9436_01185	188.0	0	Peptidase M15A	N/A
Pfam	UHGV-1304911_44	PF08291	N/A	N/A	Peptidase M15	Peptidase_M15_3
COG	UHGV-1304911_44	COG3108	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1304911_44	PF05951,COG3108	N/A	N/A	N/A	N/A
PHROG	UHGV-1304911_46	phrog_1863	64.3	1.2e-18	N/A	unknown function
eggNOG-mapper	UHGV-1304911_46	748224.HMPREF9436_01412	115.0	3.8e-33	N/A	N/A
PHROG	UHGV-1304911_47	phrog_263	77.7	1e-22	holin	lysis
UniRef90	UHGV-1304911_47	UniRef90_A0A2A6ZGP9	127.0	1.1e-36	Phage holin	N/A
eggNOG-mapper	UHGV-1304911_47	748224.HMPREF9436_01413	120.0	1.68e-34	SPP1 phage holin	N/A
Pfam	UHGV-1304911_47	PF04688	N/A	N/A	SPP1 phage holin	Holin_SPP1
NCBIFam	UHGV-1304911_47	TIGR01592.1	N/A	N/A	phage holin	N/A
structural_annotation	UHGV-1304911_47	PF04688	N/A	N/A	N/A	N/A
KOfam	UHGV-1304911_48	K07699	45.3	0.00000000000099	spo0A; two-component system, response regulator, stage 0 sporulation protein A	N/A
PHROG	UHGV-1304911_48	phrog_24603	40.6	0.00000000004	N/A	unknown function
UniRef90	UHGV-1304911_48	UniRef90_A0A291T8I8	152.0	4.2039e-45	Spo0A_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1304911_48	1226322.HMPREF1545_01110	68.6	0.000000000000528	Sporulation initiation factor Spo0A C terminal	N/A
Pfam	UHGV-1304911_48	PF08769	N/A	N/A	Sporulation initiation factor Spo0A C terminal	Spo0A_C
COG	UHGV-1304911_48	COG2197	N/A	N/A	DNA-binding response regulator, NarL/FixJ family, contains REC and HTH domains	N/A
structural_annotation	UHGV-1304911_48	PF08769,TIGR02875	N/A	N/A	N/A	N/A
KOfam	UHGV-1304911_49	K06400	245.4	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-1304911_49	phrog_95	234.4	0	integrase	integration and excision
UniRef90	UHGV-1304911_49	UniRef90_D4KBP6	723.0	0	Site-specific recombinases, DNA invertase Pin homologs	N/A
eggNOG-mapper	UHGV-1304911_49	748224.HMPREF9436_01608	729.0	0	N/A	N/A
Pfam	UHGV-1304911_49	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-1304911_49	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-1304911_49	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-1304911_49	PF07508,NF041201	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1304911	Yes	35,001	61	100	1
UHGV-0183006	No	27,846	61	79	1
UHGV-0073758	No	27,716	61	78	1
UHGV-2032315	No	12,296	60	35	1
UHGV-2027617	No	11,027	61	32	1