vOTU vOTU-071661

vOTU: vOTU-071661

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071661
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-01593 → vGENUS-21735 → vSUBGEN-43181 → vOTU-071661
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0021609
Biosample ID	N/A
Genome length (bp)	36,803 bps
CheckV completeness	99.90% (High-quality)
CDS count	56
CDS density	92.37%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Onthomonas → Onthomonas sp900545815	Total connections	104	Host agreement	80.77
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0021609_2	phrog_5070	144.7	2.49431e-43	N/A	unknown function
eggNOG-mapper	UHGV-0021609_2	1094553.MCS_01359	91.7	7.95e-19	Homologous to orf229 gp Streptococcus thermophilus bacteriophage Sfi19 gi 9632919 ref NP_049948.1	N/A
COG	UHGV-0021609_2	COG1044	N/A	N/A	UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase	N/A
KOfam	UHGV-0021609_3	K07729	53.5	0.000000000000005	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0021609_3	phrog_3	52.5	0.000000000000019	transcriptional repressor	transcription regulation
UniRef90	UHGV-0021609_3	UniRef90_A0A1B7WCQ8	51.6	0.00000106	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0021609_3	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021609_3	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0021609_3	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0021609_4	K07273	216.9	0	acm; lysozyme	N/A
PHROG	UHGV-0021609_4	phrog_291	170.1	0	endolysin	lysis
UniRef90	UHGV-0021609_4	UniRef90_E9SCJ9	182.0	0	Glycosyl hydrolase family 25	N/A
eggNOG-mapper	UHGV-0021609_4	641112.ACOK01000108_gene1814	208.0	0	hydrolase, family 25	N/A
Pfam	UHGV-0021609_4	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0021609_4	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
COG	UHGV-0021609_4	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0021609_4	PF01183,MF_00691,TIGR02869,NF003814,COG3757	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_5	phrog_443	54.5	0.0000000000000029	holin	lysis
UniRef90	UHGV-0021609_5	UniRef90_UPI001B3C9F75	73.6	6.9e-16	holin	N/A
eggNOG-mapper	UHGV-0021609_5	1298920.KI911353_gene2669	72.8	2.46e-16	Putative lactococcus lactis phage r1t holin	N/A
Pfam	UHGV-0021609_5	PF16945	N/A	N/A	Putative lactococcus lactis phage r1t holin	Phage_r1t_holin
structural_annotation	UHGV-0021609_5	PF16945	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_6	phrog_1863	67.5	1.1e-19	N/A	unknown function
eggNOG-mapper	UHGV-0021609_6	693746.OBV_18260	108.0	4.18e-30	N/A	N/A
KOfam	UHGV-0021609_8	K01104	49.8	0.000000000000032	E3.1.3.48; protein-tyrosine phosphatase [EC:3.1.3.48]	N/A
UniRef90	UHGV-0021609_8	UniRef90_UPI001BF10870	178.0	7.70714e-44	Tyrosine-protein phosphatase	N/A
eggNOG-mapper	UHGV-0021609_8	610130.Closa_0587	71.6	0.000000000054	Tyrosine phosphatase family	N/A
Pfam	UHGV-0021609_8	PF13350	N/A	N/A	Tyrosine phosphatase family	Y_phosphatase3
COG	UHGV-0021609_8	COG2365	N/A	N/A	Protein tyrosine/serine phosphatase Oca4	N/A
KOfam	UHGV-0021609_11	K20282	48.7	0.000000000000016	GCC2; GRIP and coiled-coil domain-containing protein 2	N/A
PHROG	UHGV-0021609_11	phrog_1272	264.8	0	tail length tape measure protein	tail
UniRef90	UHGV-0021609_11	UniRef90_UPI000E4E93AA	129.0	2.51e-26	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0021609_11	665950.HMPREF1025_02680	372.0	0	Phage-related minor tail protein	N/A
Pfam	UHGV-0021609_11	PF10145	N/A	N/A	Phage-related minor tail protein	PhageMin_Tail
COG	UHGV-0021609_11	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0021609_11	PF10145,TIGR01760,COG5280	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_12	phrog_706	97.0	1.6e-28	N/A	unknown function
UniRef90	UHGV-0021609_12	UniRef90_UPI0006828F20	100.0	4.9e-23	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0021609_12	411490.ANACAC_00711	92.8	1.49e-20	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0021609_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0021609_12	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_14	phrog_820	48.6	0.000000000000074	major tail protein	tail
UniRef90	UHGV-0021609_14	UniRef90_A0A174M1L1	124.0	6.97e-32	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0021609_14	411471.SUBVAR_06988	137.0	3.58e-39	N/A	N/A
structural_annotation	UHGV-0021609_14	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_15	phrog_3266	103.2	1.6e-30	tail completion	connector
UniRef90	UHGV-0021609_15	UniRef90_UPI000F637EFF	123.0	1.66e-33	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0021609_15	411473.RUMCAL_01934	82.4	4.04e-18	N/A	N/A
structural_annotation	UHGV-0021609_15	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_16	phrog_556	67.4	1.7e-19	minor head protein	head and packaging
UniRef90	UHGV-0021609_16	UniRef90_UPI000F63A4E5	115.0	7.88e-31	minor capsid protein	N/A
eggNOG-mapper	UHGV-0021609_16	428127.EUBDOL_01220	61.6	0.00000000031	N/A	N/A
Pfam	UHGV-0021609_16	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-0021609_16	PF11114	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021609_17	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_19	phrog_422	233.7	0	major head protein	head and packaging
eggNOG-mapper	UHGV-0021609_19	693746.OBV_18090	371.0	0	N/A	N/A
structural_annotation	UHGV-0021609_19	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_20	phrog_194	77.2	2.7e-22	head scaffolding protein	head and packaging
UniRef90	UHGV-0021609_20	UniRef90_UPI001C1258D3	200.0	0	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0021609_20	663278.Ethha_0093	143.0	6.29001e-41	N/A	N/A
Pfam	UHGV-0021609_20	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0021609_20	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_21	phrog_581	328.8	0	minor head protein	head and packaging
UniRef90	UHGV-0021609_21	UniRef90_A0A417EY47	380.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0021609_21	1120998.AUFC01000030_gene2233	326.0	0	N/A	N/A
Pfam	UHGV-0021609_21	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0021609_21	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021609_21	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_22	phrog_533	384.4	0	portal protein	head and packaging
UniRef90	UHGV-0021609_22	UniRef90_UPI001C1263AE	523.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-0021609_22	411490.ANACAC_00782	424.0	0	N/A	N/A
structural_annotation	UHGV-0021609_22	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0021609_23	K06909	125.0	6.8e-37	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0021609_23	phrog_10250	164.5	0	N/A	unknown function
UniRef90	UHGV-0021609_23	UniRef90_UPI000A271D3A	484.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0021609_23	641112.ACOK01000073_gene2888	483.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0021609_23	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
NCBIFam	UHGV-0021609_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0021609_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0021609_23	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_24	phrog_309	134.3	3.5e-40	terminase small subunit	head and packaging
UniRef90	UHGV-0021609_24	UniRef90_A0A8J6P944	155.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0021609_24	693746.OBV_18020	137.0	1.39e-39	transposase activity	N/A
COG	UHGV-0021609_24	COG2963	N/A	N/A	Transposase InsE and inactivated derivatives	N/A
structural_annotation	UHGV-0021609_24	PF07141	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_25	phrog_20533	40.7	0.000000000023	N/A	unknown function
UniRef90	UHGV-0021609_25	UniRef90_A0A413FXL7	111.0	1e-27	PLD phosphodiesterase domain-containing protein	N/A
eggNOG-mapper	UHGV-0021609_25	1123058.KB894251_gene2369	60.8	0.00000000544	N/A	N/A
structural_annotation	UHGV-0021609_25	PF17941,MF_01918,NF010490,COG3886	N/A	N/A	N/A	N/A
UniRef90	UHGV-0021609_26	UniRef90_UPI00082C6619	142.0	2.89999e-41	ParB N-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0021609_29	1297617.JPJD01000059_gene2640	95.5	4.14e-23	N/A	N/A
structural_annotation	UHGV-0021609_29	PF06530,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-0021609_32	K07726	47.9	0.00000000000024	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0021609_32	phrog_2104	40.5	0.000000000012	N/A	unknown function
eggNOG-mapper	UHGV-0021609_32	155864.EDL933_0960	50.8	0.00000577	helix-turn-helix	N/A
Pfam	UHGV-0021609_32	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021609_32	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0021609_32	PF13560,NF007257,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_34	phrog_190	108.7	4.6e-32	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021609_34	UniRef90_A0A6N7XIA3	115.0	3.88e-31	N/A	N/A
eggNOG-mapper	UHGV-0021609_34	1236514.BAKL01000051_gene3708	99.0	2.08e-25	N/A	N/A
Pfam	UHGV-0021609_34	PF06356	N/A	N/A	N/A	DUF1064
structural_annotation	UHGV-0021609_34	PF06356	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0021609_36	411459.RUMOBE_01111	79.7	6.02e-17	N/A	N/A
KOfam	UHGV-0021609_37	K01160	52.6	0.000000000000012	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0021609_37	phrog_34	51.8	0.000000000000014	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021609_37	UniRef90_C7RH80	103.0	4.55e-26	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0021609_37	525919.Apre_0813	103.0	7.64e-27	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0021609_37	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0021609_37	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0021609_38	K02315	115.8	3.8e-34	dnaC; DNA replication protein DnaC	N/A
PHROG	UHGV-0021609_38	phrog_50	113.3	2.2e-33	DnaC-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021609_38	UniRef90_UPI001AA0C12C	224.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0021609_38	1507.HMPREF0262_00302	193.0	0	Bacterial dnaA protein	N/A
Pfam	UHGV-0021609_38	PF01695	N/A	N/A	IstB-like ATP binding protein	IstB_IS21
COG	UHGV-0021609_38	COG1484	N/A	N/A	DNA replication protein DnaC	N/A
structural_annotation	UHGV-0021609_38	PF01695,MF_01158,NF005378,COG1484	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_39	phrog_428	118.0	2.1e-35	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021609_39	UniRef90_UPI000B1808B0	106.0	3.65e-24	conserved phage C-terminal domain-containing protein	N/A
eggNOG-mapper	UHGV-0021609_39	1497679.EP56_15125	106.0	1.26e-24	N-terminal phage replisome organiser (Phage_rep_org_N)	N/A
Pfam	UHGV-0021609_39	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0021609_39	PF09524	N/A	N/A	Conserved phage C-terminus (Phg_2220_C)	Phg_2220_C
NCBIFam	UHGV-0021609_39	TIGR02220.1	N/A	N/A	phage conserved hypothetical protein, C-terminal domain	N/A
structural_annotation	UHGV-0021609_39	PF19808	N/A	N/A	N/A	N/A
KOfam	UHGV-0021609_40	K03111	134.0	1.6e-39	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0021609_40	phrog_44	137.4	8.60005e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0021609_40	UniRef90_A0A316PSZ3	180.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0021609_40	1297617.JPJD01000076_gene1093	169.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0021609_40	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0021609_40	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0021609_40	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0021609_40	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0021609_40	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_41	phrog_398	159.9	0	N/A	unknown function
UniRef90	UHGV-0021609_41	UniRef90_UPI00137B6F1E	265.0	0	putative HNHc nuclease	N/A
eggNOG-mapper	UHGV-0021609_41	1485543.JMME01000021_gene802	197.0	0	Putative HNHc nuclease	N/A
Pfam	UHGV-0021609_41	PF16784	N/A	N/A	Putative HNHc nuclease	HNHc_6
structural_annotation	UHGV-0021609_41	PF16784	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_42	phrog_14970	258.1	0	N/A	unknown function
UniRef90	UHGV-0021609_42	UniRef90_A0A3P6JH63	214.0	0	Essential recombination function protein	N/A
eggNOG-mapper	UHGV-0021609_42	411468.CLOSCI_00315	214.0	0	double-strand break repair protein	N/A
COG	UHGV-0021609_42	COG4712	N/A	N/A	Predicted ssDNA annealing protein, contains HHH motif, Rad42/Rad22/RecT/erf family	N/A
structural_annotation	UHGV-0021609_42	PF04098,TIGR00607,COG4712	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0021609_47	PF19607	N/A	N/A	N/A	N/A
KOfam	UHGV-0021609_53	K22300	63.0	5.6e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0021609_53	phrog_8	48.6	0.00000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0021609_53	UniRef90_A0A7X8EVH2	78.2	0.00000000000000864	Helix-turn-helix transcriptional regulator	N/A
eggNOG-mapper	UHGV-0021609_53	742725.HMPREF9450_00102	65.1	0.000000000274	Helix-turn-helix domain	N/A
Pfam	UHGV-0021609_53	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0021609_53	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0021609_54	phrog_1914	57.5	2.3e-16	N/A	unknown function
COG	UHGV-0021609_54	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0021609_54	PF06114,COG2856	N/A	N/A	N/A	N/A
PHROG	UHGV-0021609_55	phrog_4980	108.0	3.5e-33	superinfection exclusion	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0021609_55	UniRef90_A0A4P8IBH7	72.4	0.0000000000858	Putative superinfection immunity protein	N/A
eggNOG-mapper	UHGV-0021609_55	1123075.AUDP01000020_gene1514	70.5	0.0000000000214	Host cell surface-exposed lipoprotein	N/A
Pfam	UHGV-0021609_55	PF07553	N/A	N/A	Host cell surface-exposed lipoprotein	Lipoprotein_Ltp
COG	UHGV-0021609_55	COG3064	N/A	N/A	Membrane protein TolA involved in colicin uptake	N/A
structural_annotation	UHGV-0021609_55	PF02631,MF_01114,NF001056,COG2137	N/A	N/A	N/A	N/A
KOfam	UHGV-0021609_56	K06400	369.9	0	spoIVCA; site-specific DNA recombinase	N/A
PHROG	UHGV-0021609_56	phrog_95	364.7	0	integrase	integration and excision
UniRef90	UHGV-0021609_56	UniRef90_A0A1C6CZ75	554.0	0	Resolvase, N terminal domain	N/A
eggNOG-mapper	UHGV-0021609_56	445972.ANACOL_00133	513.0	0	Resolvase, N terminal domain	N/A
Pfam	UHGV-0021609_56	PF00239	N/A	N/A	Resolvase, N terminal domain	Resolvase
Pfam	UHGV-0021609_56	PF07508	N/A	N/A	Recombinase	Recombinase
Pfam	UHGV-0021609_56	PF13408	N/A	N/A	Recombinase zinc beta ribbon domain	Zn_ribbon_recom
COG	UHGV-0021609_56	COG1961	N/A	N/A	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	N/A
structural_annotation	UHGV-0021609_56	PF00239,PF07508,NF041201,COG1961	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0021609	Yes	36,803	56	100	1