vOTU vOTU-071831

vOTU: vOTU-071831

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071831
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00279 → vGENUS-00622 → vSUBGEN-42206 → vOTU-071831
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0033758
Biosample ID	SAMEA4765669
Genome length (bp)	35,107 bps
CheckV completeness	91.41% (High-quality)
CDS count	48
CDS density	91.96%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	80	Host agreement	86.25
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → CAG-177 → CAG-177 sp003514385	Total connections	169	Host agreement	85.8

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 91.41)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
structural_annotation	UHGV-0033758_2	PF02973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033758_3	PF10651,NF009453	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_5	phrog_6616	521.3	0	tail protein	tail
UniRef90	UHGV-0033758_5	UniRef90_A0A0J1FXD9	136.0	1.66e-29	Peptidase S74 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033758_5	1294142.CINTURNW_1042	70.5	0.00000000182	Phage minor structural protein	N/A
COG	UHGV-0033758_5	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-0033758_5	PF14594,NF033848,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_6	phrog_1194	94.1	1e-27	N/A	unknown function
UniRef90	UHGV-0033758_6	UniRef90_A0A0R1Q5P9	53.1	0.00000218	N/A	N/A
eggNOG-mapper	UHGV-0033758_6	1400520.LFAB_05290	58.2	0.0000000044	N/A	N/A
Pfam	UHGV-0033758_6	PF20458	N/A	N/A	N/A	DUF6711
structural_annotation	UHGV-0033758_6	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_7	phrog_23726	72.4	1.50001e-40	N/A	unknown function
eggNOG-mapper	UHGV-0033758_7	428125.CLOLEP_01549	149.0	1.39e-39	cell wall binding repeat	N/A
COG	UHGV-0033758_7	COG2247	N/A	N/A	Putative cell wall-binding domain (amidase enhancer), LytB superfamily	N/A
PHROG	UHGV-0033758_8	phrog_1535	88.7	5.3e-26	tail length tape measure protein	tail
eggNOG-mapper	UHGV-0033758_8	645991.Sgly_0352	194.0	0	SLT domain	N/A
COG	UHGV-0033758_8	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
UniRef90	UHGV-0033758_9	UniRef90_UPI0012BCDD8A	60.5	0.00000000257	N/A	N/A
eggNOG-mapper	UHGV-0033758_9	1211844.CBLM010000016_gene1484	56.6	0.0000000225	N/A	N/A
structural_annotation	UHGV-0033758_9	PF19591	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_10	phrog_158	63.2	5.8e-18	major tail protein	tail
UniRef90	UHGV-0033758_10	UniRef90_R6HYI8	279.0	0	Major tail protein putative	N/A
eggNOG-mapper	UHGV-0033758_10	1209989.TepiRe1_1157	85.5	2.4e-19	Phage tail tube protein, TTP	N/A
Pfam	UHGV-0033758_10	PF16461	N/A	N/A	Lambda phage tail tube protein, TTP	Phage_TTP_12
structural_annotation	UHGV-0033758_10	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033758_11	PF05657	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_12	phrog_5	102.0	6.3e-30	tail completion or Neck1 protein	connector
UniRef90	UHGV-0033758_12	UniRef90_R6IVT6	329.0	0	Bacteriophage protein PF04883 family	N/A
eggNOG-mapper	UHGV-0033758_12	1280692.AUJL01000025_gene2076	139.0	5.43999e-40	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0033758_12	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0033758_12	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0033758_12	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033758_13	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_14	phrog_132	50.9	0.000000000000023	head-tail adaptor	connector
UniRef90	UHGV-0033758_14	UniRef90_R6I6I7	223.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033758_14	268407.PWYN_03015	50.1	0.00000329	N/A	N/A
PHROG	UHGV-0033758_15	phrog_283	289.3	0	major head protein	head and packaging
UniRef90	UHGV-0033758_15	UniRef90_UPI001896DBE2	409.0	0	P22 coat protein	N/A
eggNOG-mapper	UHGV-0033758_15	1297617.JPJD01000059_gene2633	392.0	0	P22 coat protein - gene protein 5	N/A
Pfam	UHGV-0033758_15	PF11651	N/A	N/A	P22 coat protein - gene protein 5	P22_CoatProtein
structural_annotation	UHGV-0033758_15	PF11651,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_16	phrog_194	152.3	2.8026e-45	head scaffolding protein	head and packaging
UniRef90	UHGV-0033758_16	UniRef90_UPI001651708C	124.0	4.73e-32	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0033758_16	1196028.ALEF01000043_gene465	104.0	2.08e-25	Phage minor structural protein GP20	N/A
Pfam	UHGV-0033758_16	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
PHROG	UHGV-0033758_18	phrog_115	348.3	0	minor head protein	head and packaging
UniRef90	UHGV-0033758_18	UniRef90_A0A3D2QEP6	641.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0033758_18	1209989.TepiRe1_1146	272.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0033758_18	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
Pfam	UHGV-0033758_18	PF14424	N/A	N/A	The BURPS668_1122 family of deaminases	Toxin-deaminase
NCBIFam	UHGV-0033758_18	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0033758_18	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033758_18	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_19	phrog_64	306.2	0	portal protein	head and packaging
UniRef90	UHGV-0033758_19	UniRef90_R6IBR5	1003.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0033758_19	97138.C820_00238	384.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0033758_19	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0033758_19	PF05133,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_20	K06909	390.7	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0033758_20	phrog_3717	175.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0033758_20	UniRef90_R6I0M1	836.0	0	Phage terminase large subunit PBSX family	N/A
eggNOG-mapper	UHGV-0033758_20	203119.Cthe_2474	529.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0033758_20	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0033758_20	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0033758_20	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0033758_20	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0033758_20	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_21	K07474	110.7	2.6e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0033758_21	phrog_51	125.3	4.3e-37	terminase small subunit	head and packaging
UniRef90	UHGV-0033758_21	UniRef90_R7GUG8	177.0	0	Prophage LambdaCh01 terminase small subunit	N/A
eggNOG-mapper	UHGV-0033758_21	608534.GCWU000341_02298	177.0	0	Terminase small subunit	N/A
Pfam	UHGV-0033758_21	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0033758_21	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0033758_21	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_23	phrog_36	75.9	6.3e-22	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033758_23	UniRef90_UPI001D05F87A	111.0	4.69e-29	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0033758_23	1235835.C814_01174	130.0	2.74e-37	N/A	N/A
structural_annotation	UHGV-0033758_23	PF04545	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_24	phrog_98	78.6	7.2e-23	N/A	unknown function
UniRef90	UHGV-0033758_24	UniRef90_A0A355KXQ4	155.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0033758_24	797515.HMPREF9103_02492	82.4	1.74e-18	YopX protein	N/A
Pfam	UHGV-0033758_24	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0033758_24	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0033758_24	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_25	phrog_954	200.7	0	DNA methyltransferase	other
UniRef90	UHGV-0033758_25	UniRef90_UPI0004115370	260.0	0	methyltransferase	N/A
eggNOG-mapper	UHGV-0033758_25	1280698.AUJS01000007_gene1028	260.0	0	Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA	N/A
PADLOC	UHGV-0033758_25	MTase_II_00074	212.8	0	Type II methyltransferase	RM
COG	UHGV-0033758_25	COG1092	N/A	N/A	23S rRNA G2069 N7-methylase RlmK or C1962 C5-methylase RlmI	N/A
structural_annotation	UHGV-0033758_25	PF05148,MF_03044,NF033398,COG1041	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0033758_26	NF001606	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_27	K01160	52.4	0.000000000000015	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0033758_27	phrog_140	102.1	5.3e-30	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033758_27	UniRef90_R6HY68	284.0	0	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0033758_27	478749.BRYFOR_07588	178.0	0	endodeoxyribonuclease RusA	N/A
Pfam	UHGV-0033758_27	PF05866	N/A	N/A	Endodeoxyribonuclease RusA	RusA
COG	UHGV-0033758_27	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0033758_27	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_28	K07505	438.1	0	repA; regulatory protein RepA	N/A
PHROG	UHGV-0033758_28	phrog_2597	1203.1	0	DNA primase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033758_28	UniRef90_A0A1C6CSE0	1074.0	0	Regulatory protein repA	N/A
eggNOG-mapper	UHGV-0033758_28	552396.HMPREF0863_02435	1044.0	0	Primase C terminal 2 (PriCT-2)	N/A
Pfam	UHGV-0033758_28	PF08707	N/A	N/A	Primase C terminal 2 (PriCT-2)	PriCT_2
Pfam	UHGV-0033758_28	PF13481	N/A	N/A	AAA domain	AAA_25
COG	UHGV-0033758_28	COG3598	N/A	N/A	RecA-family ATPase	N/A
structural_annotation	UHGV-0033758_28	PF13481,PF16793,PF08220,MF_00350,MF_00700,NF006606,NF001641,COG3598,COG3285	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_29	K17677	353.0	0	IRC3; ATP-dependent helicase IRC3 [EC:5.6.2.-]	N/A
PHROG	UHGV-0033758_29	phrog_16	293.3	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033758_29	UniRef90_R6I0L6	1050.0	0	Type III restriction protein res subunit	N/A
eggNOG-mapper	UHGV-0033758_29	610130.Closa_1369	808.0	0	DEAD-like helicases superfamily	N/A
PADLOC	UHGV-0033758_29	mREase_IV_00005	144.7	7.59504e-43	Type IV methyl-directed restriction enzyme	RM
Pfam	UHGV-0033758_29	PF04851	N/A	N/A	Type III restriction enzyme, res subunit	ResIII
Pfam	UHGV-0033758_29	PF00271	N/A	N/A	Helicase conserved C-terminal domain	Helicase_C
COG	UHGV-0033758_29	COG1061	N/A	N/A	Superfamily II DNA or RNA helicase	N/A
structural_annotation	UHGV-0033758_29	PF04851,PF16203,MF_01489,NF008521,COG1061	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_30	phrog_2698	198.6	0	N/A	unknown function
UniRef90	UHGV-0033758_30	UniRef90_A0A417IL23	167.0	0	N/A	N/A
eggNOG-mapper	UHGV-0033758_30	1123511.KB905868_gene200	173.0	0	N/A	N/A
structural_annotation	UHGV-0033758_30	PF05037	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_31	phrog_124	239.9	0	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0033758_31	UniRef90_UPI001411FE86	404.0	0	ATP-binding protein	N/A
eggNOG-mapper	UHGV-0033758_31	394503.Ccel_3309	396.0	0	AAA domain	N/A
Pfam	UHGV-0033758_31	PF13479	N/A	N/A	AAA domain	AAA_24
structural_annotation	UHGV-0033758_31	PF13479,MF_00268,TIGR01618,COG0468	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_32	K03546	66.3	3.5e-19	sbcC, rad50; DNA repair protein SbcC/Rad50	N/A
PHROG	UHGV-0033758_32	phrog_1499	483.9	0	N/A	unknown function
UniRef90	UHGV-0033758_32	UniRef90_R6IXY5	775.0	0	AAA_15 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033758_32	411462.DORLON_00812	531.0	0	AAA ATPase domain	N/A
PADLOC	UHGV-0033758_32	AAA_15	41.9	0.000000000014	N/A	N/A
Pfam	UHGV-0033758_32	PF13476	N/A	N/A	AAA domain	AAA_23
COG	UHGV-0033758_32	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0033758_32	PF11398,MF_00365,TIGR00634,COG0497	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_33	K07729	55.2	0.0000000000000016	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0033758_33	phrog_8	57.6	3.1e-16	transcriptional regulator	transcription regulation
UniRef90	UHGV-0033758_33	UniRef90_R6HY73	214.0	0	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0033758_33	203119.Cthe_0364	55.5	0.000000431	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0033758_33	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0033758_33	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0033758_33	PF12844,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_36	K01449	62.2	8.5e-18	cwlJ, sleB; N-acetylmuramoyl-L-alanine amidase [EC:3.5.1.28]	N/A
PHROG	UHGV-0033758_36	phrog_18750	139.3	2.4e-41	N/A	unknown function
UniRef90	UHGV-0033758_36	UniRef90_A0A3D5TM41	165.0	0	Hydrolase_2 domain-containing protein	N/A
eggNOG-mapper	UHGV-0033758_36	1519439.JPJG01000051_gene725	138.0	2.6e-39	Cell wall hydrolase	N/A
Pfam	UHGV-0033758_36	PF07486	N/A	N/A	Cell Wall Hydrolase	Hydrolase_2
COG	UHGV-0033758_36	COG3773	N/A	N/A	Cell wall hydrolase CwlJ, involved in spore germination	N/A
structural_annotation	UHGV-0033758_36	PF07486,TIGR02869,COG3773	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033758_41	UniRef90_A0A1Y3RFS1	82.4	3.03e-19	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033758_41	428125.CLOLEP_02737	71.2	0.00000000000000126	N/A	N/A
structural_annotation	UHGV-0033758_41	TIGR03070	N/A	N/A	N/A	N/A
UniRef90	UHGV-0033758_42	UniRef90_A0A348Z948	68.9	0.0000000000000932	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0033758_42	1262914.BN533_00808	65.9	0.000000000000257	N/A	N/A
Pfam	UHGV-0033758_42	PF05339	N/A	N/A	N/A	DUF739
COG	UHGV-0033758_42	COG3655	N/A	N/A	DNA-binding transcriptional regulator, XRE family	N/A
KOfam	UHGV-0033758_43	K01356	114.6	1.4e-33	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0033758_43	phrog_4	132.5	3.6e-39	transcriptional repressor	transcription regulation
UniRef90	UHGV-0033758_43	UniRef90_R5Y1G1	258.0	0	Putative phage repressor	N/A
eggNOG-mapper	UHGV-0033758_43	1262914.BN533_00809	121.0	1.44e-31	Peptidase S24-like	N/A
Pfam	UHGV-0033758_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0033758_43	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0033758_43	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0033758_43	PF00717,PF01381,MF_00015,TIGR00498,COG1974	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_44	phrog_8887	59.8	3e-17	toxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0033758_44	UniRef90_A0A4Q3EI93	92.8	4.96e-23	Type II toxin-antitoxin system HicA family toxin	N/A
eggNOG-mapper	UHGV-0033758_44	1268240.ATFI01000008_gene2583	74.3	1.71e-16	HicA toxin of bacterial toxin-antitoxin,	N/A
Pfam	UHGV-0033758_44	PF07927	N/A	N/A	HicA toxin of bacterial toxin-antitoxin,	HicA_toxin
structural_annotation	UHGV-0033758_44	COG1724	N/A	N/A	N/A	N/A
PHROG	UHGV-0033758_45	phrog_9151	149.8	8.40779e-45	HicB-like antitoxin	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0033758_45	UniRef90_UPI0009E36456	129.0	1.52e-35	type II toxin-antitoxin system HicB family antitoxin	N/A
eggNOG-mapper	UHGV-0033758_45	1392502.JNIO01000008_gene1606	124.0	8.17e-35	protein encoded in hypervariable junctions of pilus gene clusters	N/A
Pfam	UHGV-0033758_45	PF05534	N/A	N/A	HicB family	HicB
COG	UHGV-0033758_45	COG4226	N/A	N/A	Predicted nuclease of the RNAse H fold, HicB family	N/A
structural_annotation	UHGV-0033758_45	PF21748,PF07878,NF041264,COG4226	N/A	N/A	N/A	N/A
KOfam	UHGV-0033758_47	K14059	152.3	5.60519e-45	int; integrase	N/A
PHROG	UHGV-0033758_47	phrog_1	160.5	0	integrase	integration and excision
UniRef90	UHGV-0033758_47	UniRef90_UPI0005AA7FA8	216.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0033758_47	693746.OBV_41260	184.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0033758_47	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0033758_47	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0033758_47	PF00589,MF_01808,NF007246,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0033758	Yes	35,107	49	91	1
UHGV-1514103	No	30,856	50	80	1