vOTU vOTU-071936

vOTU: vOTU-071936

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071936
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-02506 → vGENUS-03091 → vSUBGEN-18653 → vOTU-071936
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Eubacterium_R
Host range breadth	Genus
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0186221
Biosample ID	N/A
Genome length (bp)	33,727 bps
CheckV completeness	96.98% (High-quality)
CDS count	66
CDS density	93.33%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → Eubacterium_R	Total connections	45	Host agreement	82.22
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 96.98)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-0186221_1	phrog_297	43.9	0.0000000000026	holin	lysis
UniRef90	UHGV-0186221_1	UniRef90_A0A351XAJ8	213.0	0	Peptidase C51 domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_5	641112.ACOK01000103_gene525	80.5	5.62e-16	N/A	N/A
structural_annotation	UHGV-0186221_6	PF18573,NF033147	N/A	N/A	N/A	N/A
KOfam	UHGV-0186221_8	K14059	219.6	0	int; integrase	N/A
PHROG	UHGV-0186221_8	phrog_1	181.9	0	integrase	integration and excision
UniRef90	UHGV-0186221_8	UniRef90_A0A348P5S8	233.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_8	1161902.HMPREF0378_0144	196.0	0	DNA integration	N/A
Pfam	UHGV-0186221_8	PF13102	N/A	N/A	Phage integrase SAM-like domain	Phage_int_SAM_5
Pfam	UHGV-0186221_8	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0186221_8	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0186221_8	PF00589,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0186221_9	K22300	46.7	0.00000000000072	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
Pfam	UHGV-0186221_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0186221_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
PHROG	UHGV-0186221_10	phrog_2967	83.8	2.1e-24	transcriptional regulator	transcription regulation
UniRef90	UHGV-0186221_10	UniRef90_R9NND4	102.0	1.39e-25	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_10	1235798.C817_00620	102.0	2.34e-26	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-0186221_10	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
COG	UHGV-0186221_10	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0186221_10	PF08667,MF_00535,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0186221_11	K22300	47.2	0.00000000000047	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0186221_11	phrog_8	44.9	0.0000000000024	transcriptional regulator	transcription regulation
UniRef90	UHGV-0186221_11	UniRef90_A0A173RFH2	74.3	4.3e-16	Helix-turn-helix	N/A
eggNOG-mapper	UHGV-0186221_11	864563.HMPREF9166_0598	57.4	0.000000000261	DNA-binding helix-turn-helix protein	N/A
Pfam	UHGV-0186221_11	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0186221_11	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0186221_11	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_12	phrog_19658	108.6	7.4e-32	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186221_12	UniRef90_UPI00068B82E3	189.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_12	1158610.UC3_02377	133.0	3.11e-35	Helix-turn-helix domain	N/A
Pfam	UHGV-0186221_12	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0186221_12	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0186221_12	PF13730,MF_01909,NF041413,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_18	phrog_253	111.9	5.4e-33	Mu Gam-like end protection	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186221_18	UniRef90_R5YHB2	132.0	2.41e-36	Gp157-like protein	N/A
eggNOG-mapper	UHGV-0186221_18	1282664.H354_06531	70.1	0.000000000000577	Siphovirus Gp157	N/A
Pfam	UHGV-0186221_18	PF05565	N/A	N/A	Siphovirus Gp157	Sipho_Gp157
structural_annotation	UHGV-0186221_18	PF05565,NF002139	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_19	phrog_11717	156.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0186221_19	1399942.U3PCT3_9CAUD	156.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-0186221_19	PF06420,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_20	phrog_72	53.7	0.0000000000000036	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0186221_20	1304866.K413DRAFT_1197	115.0	3.51e-30	N/A	N/A
structural_annotation	UHGV-0186221_20	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_21	phrog_7566	95.1	4.3e-28	N/A	unknown function
eggNOG-mapper	UHGV-0186221_21	1007096.BAGW01000031_gene114	91.3	1.26e-22	N/A	N/A
KOfam	UHGV-0186221_23	K03111	124.8	1.1e-36	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0186221_23	phrog_44	135.0	5.1e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0186221_23	UniRef90_A0A1T4M5T3	225.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0186221_23	718252.FP2_06770	162.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0186221_23	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0186221_23	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0186221_23	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0186221_23	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0186221_23	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_25	phrog_6380	47.9	0.00000000000015	DNA methyltransferase	other
UniRef90	UHGV-0186221_25	UniRef90_R7FFM7	101.0	1.04e-23	N-6 DNA Methylase	N/A
eggNOG-mapper	UHGV-0186221_25	1111134.HMPREF1253_0397	115.0	1.91e-28	site-specific DNA-methyltransferase (adenine-specific) activity	N/A
COG	UHGV-0186221_25	COG0286	N/A	N/A	Type I restriction-modification system, DNA methylase subunit	N/A
PHROG	UHGV-0186221_26	phrog_824	134.1	5.1e-40	N/A	unknown function
UniRef90	UHGV-0186221_26	UniRef90_A0A1H8UNP5	152.0	1.4013e-45	VRR-NUC domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_26	397288.C806_00096	138.0	1.76999e-40	VRR_NUC	N/A
Pfam	UHGV-0186221_26	PF08774	N/A	N/A	VRR-NUC domain	VRR_NUC
structural_annotation	UHGV-0186221_26	PF08774	N/A	N/A	N/A	N/A
KOfam	UHGV-0186221_27	K07319	50.4	0.000000000000033	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0186221_27	phrog_6025	40.1	0.000000000054	DNA methyltransferase	other
UniRef90	UHGV-0186221_27	UniRef90_A0A1X9SII0	74.3	5e-16	Cytosine specific DNA methyltransferase	N/A
eggNOG-mapper	UHGV-0186221_27	1434319.W5RV19_9CAUD	61.2	0.000000000148	helicase activity	N/A
structural_annotation	UHGV-0186221_29	PF09871,COG4014	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_31	phrog_3136	116.5	1.1e-34	N/A	unknown function
UniRef90	UHGV-0186221_31	UniRef90_A0A3D0HBD2	119.0	9.95e-31	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_31	97139.C824_00742	58.5	0.0000000179	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0186221_31	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0186221_31	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_33	phrog_8684	102.2	2.7e-31	N/A	unknown function
UniRef90	UHGV-0186221_33	UniRef90_A0A412ULY6	148.0	4.00771e-43	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_33	742767.HMPREF9456_03352	69.7	0.000000000000295	YopX protein	N/A
Pfam	UHGV-0186221_33	PF09643	N/A	N/A	YopX protein	YopX
NCBIFam	UHGV-0186221_33	TIGR01671.1	N/A	N/A	phage conserved hypothetical protein TIGR01671	N/A
structural_annotation	UHGV-0186221_33	PF09643,TIGR01671	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_35	phrog_1233	86.8	2.8e-25	N/A	unknown function
eggNOG-mapper	UHGV-0186221_35	357809.Cphy_2967	89.4	1.43e-21	N/A	N/A
structural_annotation	UHGV-0186221_35	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_36	phrog_36	59.6	6.9e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0186221_36	UniRef90_A0A7C6D6F2	61.6	0.00000000211	Sigma70_r4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_36	767817.Desgi_4522	55.5	0.0000000857	sigma factor activity	N/A
Pfam	UHGV-0186221_36	PF07374	N/A	N/A	N/A	DUF1492
COG	UHGV-0186221_36	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0186221_36	PF07374,MF_00674,TIGR02984,COG1342	N/A	N/A	N/A	N/A
UniRef90	UHGV-0186221_39	UniRef90_UPI0004147963	63.2	0.00000000000673	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_39	1280680.AUJU01000007_gene2221	60.1	0.0000000000187	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0186221_39	PF13384	N/A	N/A	Homeodomain-like domain	HTH_23
COG	UHGV-0186221_39	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0186221_39	PF08965,NF041951,COG2944	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186221_42	665942.HMPREF1022_00986	52.4	0.000000492	N/A	N/A
PHROG	UHGV-0186221_43	phrog_38	160.2	0	terminase large subunit	head and packaging
UniRef90	UHGV-0186221_43	UniRef90_UPI001C397E52	531.0	0	Terminase family protein	N/A
eggNOG-mapper	UHGV-0186221_43	1232453.BAIF02000011_gene3352	522.0	0	N/A	N/A
structural_annotation	UHGV-0186221_43	PF17289,PF05876,MF_04147,NF033889,COG5323	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_44	phrog_64	352.0	0	portal protein	head and packaging
UniRef90	UHGV-0186221_44	UniRef90_A0A1Y4QSM0	477.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0186221_44	1235792.C808_05332	459.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0186221_44	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0186221_44	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0186221_44	PF05133,MF_04120,TIGR01538,COG5518	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_45	phrog_115	267.9	0	minor head protein	head and packaging
UniRef90	UHGV-0186221_45	UniRef90_A0A1Y4R791	377.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-0186221_45	1235792.C808_05333	339.0	0	Phage Mu protein F like protein	N/A
Pfam	UHGV-0186221_45	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0186221_45	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0186221_45	COG2369	N/A	N/A	N/A	N/A
KOfam	UHGV-0186221_47	K07584	60.8	2.6e-17	N/A	N/A
PHROG	UHGV-0186221_47	phrog_4478	71.2	7.3e-21	peptidase	other
UniRef90	UHGV-0186221_47	UniRef90_A0A3A6GBX2	87.0	1.05e-19	Ribosomal-processing cysteine protease Prp	N/A
eggNOG-mapper	UHGV-0186221_47	411470.RUMGNA_03236	89.4	2.07e-21	Cysteine protease Prp	N/A
Pfam	UHGV-0186221_47	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0186221_47	COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_48	phrog_172	144.1	1.00053e-42	head scaffolding protein	head and packaging
UniRef90	UHGV-0186221_48	UniRef90_A0A3N0HYM1	125.0	7.84e-33	N/A	N/A
eggNOG-mapper	UHGV-0186221_48	1235792.C808_05338	113.0	1.26e-28	N/A	N/A
Pfam	UHGV-0186221_48	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0186221_48	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_49	phrog_544	176.1	0	major head protein	head and packaging
UniRef90	UHGV-0186221_49	UniRef90_A0A0A1ELG8	249.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-0186221_49	476272.RUMHYD_02854	291.0	0	N/A	N/A
structural_annotation	UHGV-0186221_49	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_50	phrog_132	58.4	1.2e-16	head-tail adaptor	connector
UniRef90	UHGV-0186221_50	UniRef90_U2TU31	70.9	0.000000000000107	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0186221_50	1235792.C808_05341	92.0	7.33e-23	N/A	N/A
Pfam	UHGV-0186221_50	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0186221_50	PF05135	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0186221_51	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_52	phrog_5	54.9	0.0000000000000024	tail completion or Neck1 protein	connector
UniRef90	UHGV-0186221_52	UniRef90_UPI001AA1C763	95.9	8.41e-23	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-0186221_52	742722.HMPREF9463_00249	91.7	4.53e-22	N/A	N/A
structural_annotation	UHGV-0186221_52	PF17395,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_53	phrog_176	69.0	6.5e-20	tail terminator	connector
UniRef90	UHGV-0186221_53	UniRef90_UPI00085C86AC	130.0	1.66e-36	N/A	N/A
eggNOG-mapper	UHGV-0186221_53	1235792.C808_05344	135.0	4.21e-39	N/A	N/A
Pfam	UHGV-0186221_53	PF16807	N/A	N/A	N/A	DUF5072
structural_annotation	UHGV-0186221_53	PF16807,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_54	phrog_1407	134.4	4.3e-40	major tail protein	tail
UniRef90	UHGV-0186221_54	UniRef90_UPI001CF87548	198.0	0	phage major tail protein, TP901-1 family	N/A
eggNOG-mapper	UHGV-0186221_54	1235792.C808_05345	187.0	0	Phage tail tube protein	N/A
Pfam	UHGV-0186221_54	PF06199	N/A	N/A	Phage tail tube protein	Phage_tail_2
NCBIFam	UHGV-0186221_54	TIGR02126.1	N/A	N/A	phage major tail protein, TP901-1 family	N/A
COG	UHGV-0186221_54	COG5437	N/A	N/A	Phage tail protein, TP901-1 family	N/A
structural_annotation	UHGV-0186221_54	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_55	phrog_2115	41.5	0.000000000026	tail protein	tail
eggNOG-mapper	UHGV-0186221_55	1235792.C808_05346	110.0	4.51e-30	N/A	N/A
PHROG	UHGV-0186221_56	phrog_7423	41.0	0.000000000023	N/A	unknown function
eggNOG-mapper	UHGV-0186221_56	1235792.C808_05347	49.3	0.00000143	N/A	N/A
PHROG	UHGV-0186221_57	phrog_58	252.1	0	tail length tape measure protein	tail
UniRef90	UHGV-0186221_57	UniRef90_A0A0L0LTH0	175.0	2.12002e-41	Tail protein	N/A
eggNOG-mapper	UHGV-0186221_57	1235792.C808_05348	344.0	0	tape measure	N/A
Pfam	UHGV-0186221_57	PF20155	N/A	N/A	Tape measure protein	TMP_3
NCBIFam	UHGV-0186221_57	TIGR02675.1	N/A	N/A	tape measure protein	N/A
COG	UHGV-0186221_57	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0186221_57	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
UniRef90	UHGV-0186221_58	UniRef90_A0A415MTE8	103.0	1.26e-22	Phage tail protein	N/A
eggNOG-mapper	UHGV-0186221_58	742723.HMPREF9477_00896	113.0	5.4e-27	N/A	N/A
structural_annotation	UHGV-0186221_58	PF16774,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_59	phrog_538	161.2	0	minor tail protein	tail
UniRef90	UHGV-0186221_59	UniRef90_UPI001F3E20C1	247.0	0	siphovirus ReqiPepy6 Gp37-like family protein	N/A
eggNOG-mapper	UHGV-0186221_59	1280698.AUJS01000007_gene1049	253.0	0	N/A	N/A
Pfam	UHGV-0186221_59	PF14594	N/A	N/A	Siphovirus ReqiPepy6 Gp37-like protein	Sipho_Gp37
structural_annotation	UHGV-0186221_59	PF14594,TIGR01665,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0186221_60	phrog_9994	160.4	0	N/A	unknown function
eggNOG-mapper	UHGV-0186221_60	1280698.AUJS01000007_gene1050	124.0	3.48e-31	N/A	N/A
structural_annotation	UHGV-0186221_60	PF20747	N/A	N/A	N/A	N/A
KOfam	UHGV-0186221_61	K16617	62.1	3.4e-18	COL13A; collagen type XIII alpha	N/A
PHROG	UHGV-0186221_61	phrog_5073	62.9	4e-18	tail fiber protein	tail
Pfam	UHGV-0186221_61	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0186221_64	phrog_1863	59.5	3e-17	N/A	unknown function
eggNOG-mapper	UHGV-0186221_64	1226322.HMPREF1545_04027	59.7	0.0000000000843	N/A	N/A
structural_annotation	UHGV-0186221_65	PF16938	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0186221_66	754027.HMPREF9554_00192	49.7	0.0000011	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0186221	Yes	33,727	40	97	1
UHGV-0212010	No	33,665	40	97	1