vOTU vOTU-071954

vOTU: vOTU-071954

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071954
Number of genomes	2
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-01472 → vGENUS-10734 → vSUBGEN-14484 → vOTU-071954
Host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-533
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0052096
Biosample ID	N/A
Genome length (bp)	33,285 bps
CheckV completeness	90.49% (High-quality)
CDS count	51
CDS density	95.39%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-533	Total connections	8	Host agreement	87.5
PHIST-predicted host lineage	Bacteria → Firmicutes → Bacilli → RF39 → UBA660 → CAG-533 → CAG-533 sp900553855	Total connections	1	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 90.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0052096_1	K02086	63.0	4.9e-18	dnaD; DNA replication protein	N/A
UniRef90	UHGV-0052096_1	UniRef90_A0A7C3YQ95	57.4	0.000000047	DnaD domain protein	N/A
eggNOG-mapper	UHGV-0052096_1	1121428.DESHY_10198___1	53.1	0.00000113	PFAM Replication initiation and membrane attachment protein (DnaB)	N/A
Pfam	UHGV-0052096_1	PF07261	N/A	N/A	Replication initiation and membrane attachment	DnaB_2
NCBIFam	UHGV-0052096_1	TIGR01446.1	N/A	N/A	DnaD domain protein	N/A
COG	UHGV-0052096_1	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
PHROG	UHGV-0052096_2	phrog_155	78.6	7.3e-23	Erf-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052096_2	UniRef90_R5A0M1	243.0	0	Erf family protein	N/A
eggNOG-mapper	UHGV-0052096_2	1484479.DI14_04910	94.7	4.01e-21	ERF superfamily	N/A
Pfam	UHGV-0052096_2	PF04404	N/A	N/A	ERF superfamily	ERF
structural_annotation	UHGV-0052096_2	PF04404,TIGR00607,COG4712	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_3	phrog_674	110.9	9.2e-33	N/A	unknown function
UniRef90	UHGV-0052096_3	UniRef90_A0A395V658	109.0	2.1e-24	N/A	N/A
eggNOG-mapper	UHGV-0052096_3	754027.HMPREF9554_00708	92.8	1.64e-18	N/A	N/A
Pfam	UHGV-0052096_3	PF07083	N/A	N/A	N/A	DUF1351
structural_annotation	UHGV-0052096_3	PF07083	N/A	N/A	N/A	N/A
KOfam	UHGV-0052096_6	K03111	136.7	2.8e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0052096_6	phrog_44	141.9	3.89981e-42	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0052096_6	UniRef90_R6AJ00	162.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0052096_6	713605.ADHG01000001_gene405	148.0	6.44597e-44	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0052096_6	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0052096_6	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0052096_6	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0052096_6	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0052096_6	PF00436,MF_00984,NF005580,COG0629	N/A	N/A	N/A	N/A
KOfam	UHGV-0052096_7	K06940	56.5	6.3e-16	N/A	N/A
PHROG	UHGV-0052096_7	phrog_32498	74.9	8e-22	N/A	unknown function
UniRef90	UHGV-0052096_7	UniRef90_A0A1W7ABU4	103.0	6.41e-26	Flagellin N-methylase	N/A
eggNOG-mapper	UHGV-0052096_7	476272.RUMHYD_03327	76.3	4.96e-16	Putative zinc- or iron-chelating domain	N/A
Pfam	UHGV-0052096_7	PF03692	N/A	N/A	Putative zinc- or iron-chelating domain	CxxCxxCC
structural_annotation	UHGV-0052096_7	PF03692	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_8	phrog_72	60.5	3.1e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0052096_8	1304866.K413DRAFT_1197	54.7	0.000000423	N/A	N/A
structural_annotation	UHGV-0052096_8	PF05772,NF007281	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_9	phrog_4973	43.5	0.0000000000052	N/A	unknown function
Pfam	UHGV-0052096_9	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0052096_9	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052096_11	PF10654	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_13	phrog_7445	58.3	1.3e-16	N/A	unknown function
UniRef90	UHGV-0052096_13	UniRef90_A0A4R3TDL2	56.2	0.000000158	PcfK-like protein	N/A
eggNOG-mapper	UHGV-0052096_13	1232449.BAHV02000018_gene1541	62.0	0.000000000188	PcfK-like protein	N/A
Pfam	UHGV-0052096_13	PF14058	N/A	N/A	PcfK-like protein	PcfK
structural_annotation	UHGV-0052096_13	PF14058	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_14	phrog_8470	106.0	1.5e-31	N/A	unknown function
UniRef90	UHGV-0052096_14	UniRef90_UPI00156D7CD7	68.9	0.00000000484	PcfJ domain-containing protein	N/A
eggNOG-mapper	UHGV-0052096_14	742735.HMPREF9467_00863	84.7	7.62e-16	PcfJ-like protein	N/A
Pfam	UHGV-0052096_14	PF14284	N/A	N/A	PcfJ-like protein	PcfJ
structural_annotation	UHGV-0052096_14	PF14284	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_15	phrog_11947	50.1	0.000000000000044	N/A	unknown function
PHROG	UHGV-0052096_22	phrog_478	129.0	1.8e-38	site-specific recombination directionality factor RDF	integration and excision
eggNOG-mapper	UHGV-0052096_22	1110697.NCAST_08_01370	110.0	2.14e-29	N/A	N/A
structural_annotation	UHGV-0052096_23	PF15456	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052096_25	PF10922	N/A	N/A	N/A	N/A
UniRef90	UHGV-0052096_26	UniRef90_A0A353JAA0	119.0	7.94e-31	Terminase_3 domain-containing protein (Fragment)	N/A
eggNOG-mapper	UHGV-0052096_26	428125.CLOLEP_01805	92.8	3.73e-22	N/A	N/A
KOfam	UHGV-0052096_27	K06909	204.4	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0052096_27	phrog_10250	116.7	1.4e-34	N/A	unknown function
UniRef90	UHGV-0052096_27	UniRef90_A0A3B8SL24	703.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0052096_27	428127.EUBDOL_01229	543.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0052096_27	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0052096_27	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0052096_27	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0052096_27	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0052096_27	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_28	phrog_533	277.1	0	portal protein	head and packaging
UniRef90	UHGV-0052096_28	UniRef90_R6Y8H1	437.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0052096_28	545697.HMPREF0216_02845	330.0	0	N/A	N/A
structural_annotation	UHGV-0052096_28	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_29	phrog_581	213.1	0	minor head protein	head and packaging
UniRef90	UHGV-0052096_29	UniRef90_R5XZV2	214.0	0	Protein gp4	N/A
eggNOG-mapper	UHGV-0052096_29	1125725.HMPREF1325_1324	121.0	1.78e-26	Phage minor capsid protein 2	N/A
Pfam	UHGV-0052096_29	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-0052096_29	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052096_29	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_30	phrog_194	47.8	0.0000000000003	head scaffolding protein	head and packaging
UniRef90	UHGV-0052096_30	UniRef90_UPI00117868A2	92.8	3.54e-20	phage scaffolding protein	N/A
eggNOG-mapper	UHGV-0052096_30	545697.HMPREF0216_02848	78.6	0.00000000000000176	Phage minor structural protein GP20	N/A
Pfam	UHGV-0052096_30	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0052096_30	PF06810,MF_02110	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_31	phrog_422	184.0	0	major head protein	head and packaging
UniRef90	UHGV-0052096_31	UniRef90_A0A345MKD0	273.0	0	Main capsid protein	N/A
eggNOG-mapper	UHGV-0052096_31	665956.HMPREF1032_02951	254.0	0	N/A	N/A
structural_annotation	UHGV-0052096_31	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_33	phrog_541	97.4	1e-28	head-tail adaptor	connector
eggNOG-mapper	UHGV-0052096_33	536233.CLO_0887	86.7	3.55e-20	N/A	N/A
PHROG	UHGV-0052096_34	phrog_3366	45.4	0.0000000000016	N/A	unknown function
structural_annotation	UHGV-0052096_34	PF20536	N/A	N/A	N/A	N/A
UniRef90	UHGV-0052096_35	UniRef90_UPI001D069E73	91.3	7.3e-21	minor capsid protein	N/A
eggNOG-mapper	UHGV-0052096_35	476272.RUMHYD_01780	62.0	0.000000000235	N/A	N/A
structural_annotation	UHGV-0052096_35	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_36	phrog_3266	68.2	1.1e-19	tail completion	connector
structural_annotation	UHGV-0052096_36	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_37	phrog_3099	89.9	3.1e-26	N/A	unknown function
eggNOG-mapper	UHGV-0052096_37	1120746.CCNL01000014_gene2102	65.9	0.0000000000454	N/A	N/A
structural_annotation	UHGV-0052096_37	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0052096_38	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_39	phrog_706	139.5	1.99993e-41	N/A	unknown function
UniRef90	UHGV-0052096_39	UniRef90_A0A1V6D632	149.0	6.39973e-42	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-0052096_39	33035.JPJF01000106_gene3124	82.0	1.14e-16	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0052096_39	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0052096_39	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_40	phrog_1535	103.2	0	tail length tape measure protein	tail
UniRef90	UHGV-0052096_40	UniRef90_A0A1C6GVH2	96.7	5.35e-17	Phage-related protein	N/A
eggNOG-mapper	UHGV-0052096_40	1226322.HMPREF1545_00059	92.4	1.96e-16	tape measure	N/A
COG	UHGV-0052096_40	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-0052096_41	PF20458,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_42	phrog_2929	119.4	1.8e-35	tail fiber protein	tail
eggNOG-mapper	UHGV-0052096_42	1141133.J9PVK4_9CAUD	102.0	1.96e-19	N/A	N/A
structural_annotation	UHGV-0052096_42	PF04862,PF05113,NF033848,NF033675,COG4379	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_43	phrog_372	214.4	0	tail protein	tail
UniRef90	UHGV-0052096_43	UniRef90_UPI0018E46574	237.0	0	N/A	N/A
eggNOG-mapper	UHGV-0052096_43	1308863.U5J9V2_9CAUD	136.0	5.1e-31	N/A	N/A
structural_annotation	UHGV-0052096_43	PF05895,MF_04116,NF010681,COG3401	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0052096_44	476272.RUMHYD_00002	65.9	0.0000000484	N/A	N/A
KOfam	UHGV-0052096_48	K19304	82.2	8.4e-24	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0052096_48	phrog_6700	51.8	0.0000000000000029	endolysin	lysis
UniRef90	UHGV-0052096_48	UniRef90_A0A1H5T3R4	69.3	0.000000000321	Peptidase family M23	N/A
eggNOG-mapper	UHGV-0052096_48	1101190.ARWB01000001_gene3412	70.9	0.0000000000127	Peptidase family M23	N/A
Pfam	UHGV-0052096_48	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0052096_48	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0052096_48	PF18342,NF033202,COG4991,COG3942	N/A	N/A	N/A	N/A
PHROG	UHGV-0052096_49	phrog_7566	46.1	0.00000000000085	N/A	unknown function
KOfam	UHGV-0052096_50	K19304	80.0	3.9e-23	mepM; murein DD-endopeptidase [EC:3.4.24.-]	N/A
PHROG	UHGV-0052096_50	phrog_6700	54.7	3.9e-16	endolysin	lysis
eggNOG-mapper	UHGV-0052096_50	163908.KB235896_gene1553	57.4	0.00000107	Domains in Na-Ca exchangers and integrin-beta4	N/A
Pfam	UHGV-0052096_50	PF01551	N/A	N/A	Peptidase family M23	Peptidase_M23
COG	UHGV-0052096_50	COG0739	N/A	N/A	Murein DD-endopeptidase MepM and murein hydrolase activator NlpD, contains LysM domain	N/A
structural_annotation	UHGV-0052096_50	PF18342,NF033202,COG4991,COG3942	N/A	N/A	N/A	N/A
KOfam	UHGV-0052096_51	K19002	142.0	5.20022e-42	mgs, bgsB; 1,2-diacylglycerol 3-alpha-glucosyltransferase [EC:2.4.1.337]	N/A
UniRef90	UHGV-0052096_51	UniRef90_R5MV79	167.0	0	Putative glycosyltransferase	N/A
eggNOG-mapper	UHGV-0052096_51	1408416.JNJT01000014_gene278	146.0	2.15e-39	Glycosyltransferase Family 4	N/A
Pfam	UHGV-0052096_51	PF13439	N/A	N/A	Glycosyltransferase Family 4	Glyco_transf_4
COG	UHGV-0052096_51	COG0438	N/A	N/A	Glycosyltransferase involved in cell wall bisynthesis	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0052096	Yes	33,285	27	90	1
UHGV-0358085	No	25,954	27	71	1