vOTU vOTU-071983

vOTU: vOTU-071983

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-071983
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00177 → vSUBGEN-33189 → vOTU-071983
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1396822
Biosample ID	SAMEA3449361
Genome length (bp)	38,817 bps
CheckV completeness	94.43% (High-quality)
CDS count	67
CDS density	93.55%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170 → CAG-170 sp000432135	Total connections	752	Host agreement	90.43
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	10	Host agreement	70

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 94.43)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-1396822_1	K14059	132.3	6.1e-39	int; integrase	N/A
PHROG	UHGV-1396822_1	phrog_1	144.3	9.89317e-43	integrase	integration and excision
UniRef90	UHGV-1396822_1	UniRef90_UPI00195CC1EE	379.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-1396822_1	1235835.C814_03141	193.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1396822_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1396822_1	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1396822_1	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
Pfam	UHGV-1396822_2	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1396822_2	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1396822_2	PF12844	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396822_4	1298920.KI911353_gene413	140.0	6.2e-39	N/A	N/A
Pfam	UHGV-1396822_4	PF12773	N/A	N/A	Double zinc ribbon	DZR
PHROG	UHGV-1396822_5	phrog_8	47.3	0.00000000000051	transcriptional regulator	transcription regulation
UniRef90	UHGV-1396822_5	UniRef90_UPI001E54DE4F	80.9	1.28e-17	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_5	1378168.N510_01712	66.6	0.0000000000113	N/A	N/A
Pfam	UHGV-1396822_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1396822_5	PF12844,NF007257,COG3655	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396822_6	UniRef90_A0A1C7FQD9	88.2	1.63e-21	Transcriptional regulator	N/A
Pfam	UHGV-1396822_6	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-1396822_6	PF13560,NF041951,COG1396	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396822_7	1235835.C814_03153	74.7	5.02e-17	N/A	N/A
structural_annotation	UHGV-1396822_7	PF09035,NF040990	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396822_8	PF10548	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396822_11	PF14634	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_12	phrog_4433	168.7	0	N/A	unknown function
eggNOG-mapper	UHGV-1396822_12	106648.BBLJ01000054_gene3814	99.8	6.33e-24	regulation of DNA-templated transcription, elongation	N/A
COG	UHGV-1396822_12	COG5164	N/A	N/A	Transcription elongation factor SPT5	N/A
structural_annotation	UHGV-1396822_12	NF007410	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_13	phrog_434	325.5	0	RecE-like recombination exonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396822_13	UniRef90_A0A1Y4W4B5	417.0	0	YqaJ domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_13	428125.CLOLEP_01823	337.0	0	YqaJ viral recombinase family	N/A
Pfam	UHGV-1396822_13	PF09588	N/A	N/A	YqaJ-like viral recombinase domain	YqaJ
NCBIFam	UHGV-1396822_13	TIGR03033.1	N/A	N/A	putative phage-type endonuclease	N/A
COG	UHGV-1396822_13	COG5377	N/A	N/A	Phage-related protein, predicted endonuclease	N/A
structural_annotation	UHGV-1396822_13	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
KOfam	UHGV-1396822_14	K07455	280.9	0	recT; recombination protein RecT	N/A
PHROG	UHGV-1396822_14	phrog_148	272.4	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396822_14	UniRef90_A0A1Y4W4R3	385.0	0	Recombinase RecT	N/A
eggNOG-mapper	UHGV-1396822_14	428125.CLOLEP_01822	342.0	0	RecT family	N/A
Pfam	UHGV-1396822_14	PF03837	N/A	N/A	RecT family	RecT
NCBIFam	UHGV-1396822_14	TIGR00616.1	N/A	N/A	recombinase, phage RecT family	N/A
COG	UHGV-1396822_14	COG3723	N/A	N/A	Recombinational DNA repair protein RecT	N/A
structural_annotation	UHGV-1396822_14	PF03837,NF007351,COG3723	N/A	N/A	N/A	N/A
KOfam	UHGV-1396822_15	K03111	151.1	9.80909e-45	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-1396822_15	phrog_44	152.2	2.8026e-45	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396822_15	UniRef90_R6LVK0	200.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-1396822_15	1007096.BAGW01000007_gene1922	190.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-1396822_15	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-1396822_15	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-1396822_15	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-1396822_15	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-1396822_15	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_16	phrog_16304	56.8	4.1e-16	N/A	unknown function
UniRef90	UHGV-1396822_16	UniRef90_A0A3D3Y5P0	221.0	0	N/A	N/A
Pfam	UHGV-1396822_16	PF19808	N/A	N/A	N/A	DUF6291
structural_annotation	UHGV-1396822_16	PF19808	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_18	phrog_424	77.2	2e-22	phosphoadenosine phosphosulfate reductase	moron, auxiliary metabolic gene and host takeover
eggNOG-mapper	UHGV-1396822_18	445972.ANACOL_01819	497.0	0	Phosphoadenosine phosphosulfate reductase family	N/A
COG	UHGV-1396822_18	COG0175	N/A	N/A	3'-phosphoadenosine 5'-phosphosulfate sulfotransferase (PAPS reductase)/FAD synthetase or related enzyme	N/A
structural_annotation	UHGV-1396822_18	PF01507,MF_00064,NF010367,COG0175	N/A	N/A	N/A	N/A
KOfam	UHGV-1396822_19	K00558	158.9	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-1396822_19	phrog_363	245.5	0	DNA methyltransferase	other
UniRef90	UHGV-1396822_19	UniRef90_G4KRB8	340.0	0	Cytosine-specific methyltransferase	N/A
eggNOG-mapper	UHGV-1396822_19	693746.OBV_01900	340.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-1396822_19	MTase_II_00058	125.2	4e-37	Type II methyltransferase	RM
Pfam	UHGV-1396822_19	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
NCBIFam	UHGV-1396822_19	TIGR00675.1	N/A	N/A	DNA (cytosine-5-)-methyltransferase	N/A
COG	UHGV-1396822_19	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-1396822_19	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_20	phrog_3136	140.4	3.50044e-42	N/A	unknown function
UniRef90	UHGV-1396822_20	UniRef90_UPI001C02A61B	156.0	1.82169e-44	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_20	1007096.BAGW01000031_gene120	59.3	0.0000000622	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-1396822_20	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1396822_20	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396822_21	665956.HMPREF1032_03087	73.6	0.00000000000000935	N/A	N/A
PHROG	UHGV-1396822_25	phrog_1770	58.2	1.7e-16	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1396822_25	536233.CLO_1822	127.0	4.06e-35	N/A	N/A
structural_annotation	UHGV-1396822_25	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396822_29	742738.HMPREF9460_02503	90.9	1.37e-22	N/A	N/A
structural_annotation	UHGV-1396822_29	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396822_30	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-1396822_31	K07474	104.9	1.4e-30	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1396822_31	phrog_51	113.0	2.3e-33	terminase small subunit	head and packaging
UniRef90	UHGV-1396822_31	UniRef90_A0A396NMY4	130.0	1.4e-36	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1396822_31	476272.RUMHYD_01754	126.0	1.51e-35	Terminase small subunit	N/A
Pfam	UHGV-1396822_31	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1396822_31	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1396822_31	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1396822_32	K06909	133.5	2.1e-39	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1396822_32	phrog_10250	158.8	0	N/A	unknown function
UniRef90	UHGV-1396822_32	UniRef90_UPI0018A99FCF	620.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-1396822_32	476272.RUMHYD_01756	450.0	0	N/A	N/A
Pfam	UHGV-1396822_32	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
Pfam	UHGV-1396822_32	PF17289	N/A	N/A	Terminase RNaseH-like domain	Terminase_6C
NCBIFam	UHGV-1396822_32	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1396822_32	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1396822_32	PF04466,PF20441,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_33	phrog_64	155.8	0	portal protein	head and packaging
UniRef90	UHGV-1396822_33	UniRef90_UPI001AA0B7FF	501.0	0	phage portal protein	N/A
eggNOG-mapper	UHGV-1396822_33	673376.F2VHW1_9CAUD	221.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-1396822_33	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1396822_33	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396822_34	PF10651,NF038186	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1396822_36	742733.HMPREF9469_01803	103.0	3.75e-24	cellulose 1,4-beta-cellobiosidase activity	N/A
COG	UHGV-1396822_36	COG5301	N/A	N/A	Phage-related tail fiber protein	N/A
PHROG	UHGV-1396822_38	phrog_37900	53.8	3.7e-18	N/A	unknown function
UniRef90	UHGV-1396822_38	UniRef90_R5IRZ6	626.0	0	N/A	N/A
eggNOG-mapper	UHGV-1396822_38	1519439.JPJG01000060_gene1894	255.0	0	N/A	N/A
Pfam	UHGV-1396822_38	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1396822_38	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1396822_38	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_39	phrog_115	124.4	9e-37	minor head protein	head and packaging
UniRef90	UHGV-1396822_39	UniRef90_A0A810PSD3	450.0	0	Phage_Mu_F domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_39	1504822.CCNO01000013_gene286	219.0	0	cell adhesion	N/A
Pfam	UHGV-1396822_39	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-1396822_39	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-1396822_39	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396822_39	PF04233,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_40	phrog_5	81.7	1.1e-23	tail completion or Neck1 protein	connector
UniRef90	UHGV-1396822_40	UniRef90_A0A7X5E1T2	194.0	0	HK97 gp10 family phage protein	N/A
eggNOG-mapper	UHGV-1396822_40	1280685.AUKC01000004_gene1630	106.0	1.16e-27	N/A	N/A
Pfam	UHGV-1396822_40	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-1396822_40	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-1396822_40	PF20039,TIGR01725,COG5005	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_41	phrog_194	48.6	0.00000000000015	head scaffolding protein	head and packaging
UniRef90	UHGV-1396822_41	UniRef90_A0A6B9SU02	150.0	1.98003e-42	Fibronectin autolysin	N/A
eggNOG-mapper	UHGV-1396822_41	476272.RUMHYD_01775	58.9	0.0000000478	COG NOG36366 non supervised orthologous group	N/A
structural_annotation	UHGV-1396822_41	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_42	phrog_544	130.3	1e-38	major head protein	head and packaging
UniRef90	UHGV-1396822_42	UniRef90_A0A1C6B5R0	593.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_42	1232453.BAIF02000011_gene3359	365.0	0	N/A	N/A
Pfam	UHGV-1396822_42	PF18316	N/A	N/A	S-layer protein SbsC C-terminal domain	S-l_SbsC_C
structural_annotation	UHGV-1396822_42	PF03864,PF18316,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_44	phrog_17977	80.4	1.5e-23	N/A	unknown function
UniRef90	UHGV-1396822_44	UniRef90_UPI00141211AB	115.0	7.02e-31	head-tail adaptor protein	N/A
structural_annotation	UHGV-1396822_44	PF07405,TIGR01563,COG5614	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396822_45	PF11367	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_46	phrog_885	76.7	2.7e-22	major tail protein	tail
UniRef90	UHGV-1396822_46	UniRef90_A0A843J9F0	218.0	0	Ig-like domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_46	1504822.CCNO01000012_gene492	243.0	0	N/A	N/A
structural_annotation	UHGV-1396822_46	PF06488,TIGR01603,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_47	phrog_18646	62.1	9.5e-18	N/A	unknown function
UniRef90	UHGV-1396822_47	UniRef90_B6CXF0	71.6	0.000000000000105	Peptidase-colicin	N/A
PHROG	UHGV-1396822_49	phrog_6900	269.0	0	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1396822_49	1123312.KB904569_gene357	323.0	0	Phage tail tape measure protein TP901	N/A
COG	UHGV-1396822_49	COG5412	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1396822_49	MF_04138,COG5281	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1396822_50	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_51	phrog_13879	199.9	0	N/A	unknown function
eggNOG-mapper	UHGV-1396822_51	1122919.KB905559_gene1344	169.0	8.54792e-44	N/A	N/A
structural_annotation	UHGV-1396822_51	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_52	phrog_18725	100.4	1.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-1396822_52	693746.OBV_18220	128.0	1.02e-35	N/A	N/A
Pfam	UHGV-1396822_53	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1396822_53	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-1396822_54	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1396822_54	PF07484	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_57	phrog_355	59.1	7.5e-17	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1396822_57	UniRef90_UPI0019572D92	149.0	5.60519e-45	N/A	N/A
eggNOG-mapper	UHGV-1396822_57	397290.C810_05229	139.0	1.56007e-41	N/A	N/A
structural_annotation	UHGV-1396822_57	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_58	phrog_6918	97.2	9.9e-29	holin	lysis
UniRef90	UHGV-1396822_58	UniRef90_A0A316QCY7	103.0	1.73e-26	Holin	N/A
eggNOG-mapper	UHGV-1396822_58	1297617.JPJD01000020_gene301	101.0	1.21e-26	Bacteriophage holin of superfamily 6 (Holin_LLH)	N/A
Pfam	UHGV-1396822_58	PF09682	N/A	N/A	Bacteriophage holin of superfamily 6 (Holin_LLH)	Phage_holin_6_1
structural_annotation	UHGV-1396822_58	PF09682,TIGR01673	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_59	phrog_14030	144.8	5.395e-43	N/A	unknown function
UniRef90	UHGV-1396822_59	UniRef90_R6LL81	246.0	0	SLH domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_59	1121866.AUGK01000003_gene1444	95.1	1.08e-19	amidase activity	N/A
COG	UHGV-1396822_59	COG1705	N/A	N/A	Flagellum-specific peptidoglycan hydrolase FlgJ	N/A
structural_annotation	UHGV-1396822_60	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
UniRef90	UHGV-1396822_63	UniRef90_UPI00164AED9E	85.9	1.78e-19	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1396822_63	1235798.C817_04600	70.1	0.0000000000000452	N/A	N/A
structural_annotation	UHGV-1396822_63	PF13560,NF040522,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-1396822_64	phrog_3754	84.6	1.2e-24	N/A	unknown function
eggNOG-mapper	UHGV-1396822_64	476272.RUMHYD_01764	160.0	0	N/A	N/A
PHROG	UHGV-1396822_65	phrog_21718	102.3	3.9e-30	N/A	unknown function
eggNOG-mapper	UHGV-1396822_65	397290.C810_05210	63.5	0.000000000209	N/A	N/A
PHROG	UHGV-1396822_66	phrog_22984	76.0	7.3e-23	N/A	unknown function
PHROG	UHGV-1396822_67	phrog_16490	45.3	0.0000000000013	N/A	unknown function
eggNOG-mapper	UHGV-1396822_67	1235790.C805_00060	59.3	0.0000000115	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1396822	Yes	38,817	54	94	1