vOTU vOTU-072634

vOTU: vOTU-072634

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072634
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia
Taxonomy (UHGV)	vFAM-00004 → vSUBFAM-00020 → vGENUS-00411 → vSUBGEN-40154 → vOTU-072634
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170
Host range breadth	Genus
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1912854
Biosample ID	N/A
Genome length (bp)	41,650 bps
CheckV completeness	99.18% (High-quality)
CDS count	78
CDS density	96.05%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-170	Total connections	248	Host agreement	79.03
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	7	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.18)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1912854_4	phrog_801	74.1	2.4e-21	endolysin; inhibits RNA polymerase	lysis
UniRef90	UHGV-1912854_4	UniRef90_UPI000B35015B	94.0	1.8e-21	N/A	N/A
eggNOG-mapper	UHGV-1912854_4	1244856.K4PY83_9CAUD	55.8	0.000000527	Cytidine and deoxycytidylate deaminase zinc-binding region	N/A
Pfam	UHGV-1912854_4	PF18909	N/A	N/A	dATP/dGTP diphosphohydrolase, N-terminal	dGTP_diPhyd_N
eggNOG-mapper	UHGV-1912854_5	742738.HMPREF9460_02503	95.9	1.46e-24	N/A	N/A
structural_annotation	UHGV-1912854_5	PF06530,MF_00674,TIGR01636,COG1342	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1912854_6	PF10922,MF_00839	N/A	N/A	N/A	N/A
KOfam	UHGV-1912854_7	K07474	110.8	2.2e-32	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1912854_7	phrog_51	116.4	1.9e-34	terminase small subunit	head and packaging
UniRef90	UHGV-1912854_7	UniRef90_A0A173R907	129.0	3.87e-36	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1912854_7	476272.RUMHYD_01754	129.0	6.5e-37	Terminase small subunit	N/A
Pfam	UHGV-1912854_7	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1912854_7	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1912854_7	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1912854_8	K06909	116.4	3e-34	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1912854_8	phrog_2	89.2	6.8e-26	terminase large subunit	head and packaging
UniRef90	UHGV-1912854_8	UniRef90_A0A0X8VAD6	447.0	0	Terminase-like family protein	N/A
eggNOG-mapper	UHGV-1912854_8	1449050.JNLE01000003_gene3895	422.0	0	phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1912854_8	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1912854_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1912854_8	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_9	phrog_533	392.8	0	portal protein	head and packaging
UniRef90	UHGV-1912854_9	UniRef90_A0A1C5N775	586.0	0	Phage portal protein, putative, A118 family	N/A
eggNOG-mapper	UHGV-1912854_9	1226322.HMPREF1545_00044	544.0	0	N/A	N/A
Pfam	UHGV-1912854_9	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-1912854_9	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_10	phrog_374	225.7	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1912854_10	UniRef90_C9KJA8	190.0	0	dUTP diphosphatase	N/A
eggNOG-mapper	UHGV-1912854_10	500635.MITSMUL_03105	190.0	0	This enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA	N/A
COG	UHGV-1912854_10	COG0756	N/A	N/A	dUTP pyrophosphatase (dUTPase)	N/A
structural_annotation	UHGV-1912854_10	PF17375	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_13	phrog_8680	231.5	0	N/A	unknown function
UniRef90	UHGV-1912854_13	UniRef90_A0A3R6D7I3	265.0	0	N/A	N/A
eggNOG-mapper	UHGV-1912854_13	411470.RUMGNA_02208	243.0	0	N/A	N/A
Pfam	UHGV-1912854_13	PF14386	N/A	N/A	N/A	DUF4417
structural_annotation	UHGV-1912854_13	PF14386	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_14	phrog_581	289.0	0	minor head protein	head and packaging
UniRef90	UHGV-1912854_14	UniRef90_UPI001D080D49	510.0	0	phage minor capsid protein	N/A
eggNOG-mapper	UHGV-1912854_14	1226322.HMPREF1545_00046	364.0	0	Phage minor capsid protein 2	N/A
Pfam	UHGV-1912854_14	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1912854_14	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1912854_14	PF06152	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1912854_15	PF06810	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_16	phrog_544	186.0	0	major head protein	head and packaging
UniRef90	UHGV-1912854_16	UniRef90_A0A810PZM2	499.0	0	S-l_SbsC_C domain-containing protein	N/A
eggNOG-mapper	UHGV-1912854_16	1347392.CCEZ01000005_gene1236	294.0	0	N/A	N/A
structural_annotation	UHGV-1912854_16	PF03864,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_17	phrog_541	101.4	5.5e-30	head-tail adaptor	connector
eggNOG-mapper	UHGV-1912854_17	642492.Clole_0822	65.1	0.000000000016	N/A	N/A
PHROG	UHGV-1912854_18	phrog_3366	105.3	4.7e-31	N/A	unknown function
eggNOG-mapper	UHGV-1912854_18	1226322.HMPREF1545_00053	166.0	0	N/A	N/A
Pfam	UHGV-1912854_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-1912854_18	PF20536,TIGR01563	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_19	phrog_556	72.7	4.3e-21	minor head protein	head and packaging
UniRef90	UHGV-1912854_19	UniRef90_UPI00195E1497	218.0	0	minor capsid protein	N/A
eggNOG-mapper	UHGV-1912854_19	1226322.HMPREF1545_00054	165.0	0	Minor capsid protein	N/A
Pfam	UHGV-1912854_19	PF11114	N/A	N/A	Minor capsid protein	Minor_capsid_2
structural_annotation	UHGV-1912854_19	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_20	phrog_3266	42.3	0.0000000000095	tail completion	connector
eggNOG-mapper	UHGV-1912854_20	1232443.BAIA02000078_gene24	169.0	0	N/A	N/A
structural_annotation	UHGV-1912854_20	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_21	phrog_3099	88.1	1.1e-25	N/A	unknown function
eggNOG-mapper	UHGV-1912854_21	1235797.C816_04186	228.0	0	N/A	N/A
structural_annotation	UHGV-1912854_21	TIGR02126	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_22	phrog_11299	67.3	2.7e-19	N/A	unknown function
eggNOG-mapper	UHGV-1912854_22	693746.OBV_18160	133.0	3.07e-38	N/A	N/A
structural_annotation	UHGV-1912854_22	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_23	phrog_706	120.8	9.7e-36	N/A	unknown function
UniRef90	UHGV-1912854_23	UniRef90_A0A2U1BEN4	209.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1912854_23	693746.OBV_18170	197.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1912854_23	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1912854_23	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_24	phrog_1535	117.3	0	tail length tape measure protein	tail
UniRef90	UHGV-1912854_24	UniRef90_A0A810PX76	238.0	0	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-1912854_24	1235797.C816_04182	375.0	0	SLT domain	N/A
COG	UHGV-1912854_24	COG1511	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_25	phrog_1194	67.8	1.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1912854_25	411902.CLOBOL_00125	110.0	2.95e-29	N/A	N/A
structural_annotation	UHGV-1912854_25	PF20458,TIGR01633,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_26	phrog_13879	226.6	0	N/A	unknown function
eggNOG-mapper	UHGV-1912854_26	1226322.HMPREF1545_00061	375.0	0	N/A	N/A
structural_annotation	UHGV-1912854_26	PF14594,PF03256,NF033848,COG4379,COG5156	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1912854_27	PF10651,NF038186	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_28	phrog_31538	45.7	0.0000000000012	N/A	unknown function
PHROG	UHGV-1912854_29	phrog_13589	163.3	0	N/A	unknown function
eggNOG-mapper	UHGV-1912854_29	428125.CLOLEP_01434	215.0	0	N/A	N/A
PHROG	UHGV-1912854_30	phrog_37900	74.0	2e-23	N/A	unknown function
UniRef90	UHGV-1912854_30	UniRef90_R5IRZ6	227.0	0	N/A	N/A
eggNOG-mapper	UHGV-1912854_30	1519439.JPJG01000060_gene1894	209.0	0	N/A	N/A
Pfam	UHGV-1912854_30	PF19789	N/A	N/A	N/A	DUF6273
COG	UHGV-1912854_30	COG3827	N/A	N/A	Cell pole-organizing protein PopZ	N/A
structural_annotation	UHGV-1912854_30	PF19789,PF13620,NF033708	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_31	phrog_18725	89.9	2.6e-26	N/A	unknown function
eggNOG-mapper	UHGV-1912854_31	693746.OBV_18220	130.0	1.72e-36	N/A	N/A
structural_annotation	UHGV-1912854_32	PF20055,MF_03008,NF010730,COG3940	N/A	N/A	N/A	N/A
Pfam	UHGV-1912854_33	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
structural_annotation	UHGV-1912854_33	PF07484	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1912854_34	1232443.BAIA02000106_gene3111	50.1	0.00000318	N/A	N/A
PHROG	UHGV-1912854_36	phrog_13256	62.2	4.9e-18	N/A	unknown function
eggNOG-mapper	UHGV-1912854_36	1226322.HMPREF1545_00166	72.8	5.73e-16	N/A	N/A
UniRef90	UHGV-1912854_37	UniRef90_A0A358M2Y7	224.0	0	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1912854_37	525254.HMPREF0072_1273	219.0	0	Mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase	N/A
COG	UHGV-1912854_37	COG0791	N/A	N/A	Cell wall-associated hydrolase, NlpC_P60 family	N/A
structural_annotation	UHGV-1912854_37	NF033743	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1912854_38	PF16509,MF_00245,NF001066,COG2739	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_39	phrog_3754	99.0	4.4e-29	N/A	unknown function
eggNOG-mapper	UHGV-1912854_39	476272.RUMHYD_01764	163.0	0	N/A	N/A
PHROG	UHGV-1912854_40	phrog_21718	94.7	6.7e-28	N/A	unknown function
eggNOG-mapper	UHGV-1912854_40	397290.C810_05210	62.0	0.000000000858	N/A	N/A
PHROG	UHGV-1912854_41	phrog_22984	74.5	2.1e-22	N/A	unknown function
PHROG	UHGV-1912854_42	phrog_16490	138.2	2.10195e-43	N/A	unknown function
eggNOG-mapper	UHGV-1912854_42	1408437.JNJN01000043_gene803	152.0	1.25977e-42	N/A	N/A
PHROG	UHGV-1912854_43	phrog_20016	178.8	0	N/A	unknown function
UniRef90	UHGV-1912854_43	UniRef90_A0A285PT46	193.0	0	Tumour necrosis factor-like domain	N/A
eggNOG-mapper	UHGV-1912854_43	397290.C810_05214	159.0	0	N/A	N/A
structural_annotation	UHGV-1912854_43	PF18573,NF033147	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_44	phrog_28802	40.0	0.0000000000027	N/A	unknown function
structural_annotation	UHGV-1912854_44	PF12510	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1912854_45	1226322.HMPREF1545_00079	94.7	1.53e-23	N/A	N/A
KOfam	UHGV-1912854_46	K14059	129.0	6.4e-38	int; integrase	N/A
PHROG	UHGV-1912854_46	phrog_1	150.4	1.54143e-44	integrase	integration and excision
UniRef90	UHGV-1912854_46	UniRef90_A0A810Q0Y2	408.0	0	Tyr recombinase domain-containing protein	N/A
eggNOG-mapper	UHGV-1912854_46	693746.OBV_43340	356.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1912854_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1912854_46	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1912854_46	PF00589,PF13495,MF_02055,TIGR02225,COG4974	N/A	N/A	N/A	N/A
Pfam	UHGV-1912854_47	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1912854_47	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-1912854_47	PF12844	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_49	phrog_5319	53.6	0.0000000000000023	outer membrane protein	other
eggNOG-mapper	UHGV-1912854_49	1158601.I585_00731	70.5	0.0000000000065	N/A	N/A
Pfam	UHGV-1912854_49	PF12773	N/A	N/A	Double zinc ribbon	DZR
structural_annotation	UHGV-1912854_49	PF03843,MF_01959,TIGR00752,NF041910,COG3390	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1912854_53	476272.RUMHYD_03309	51.6	0.000000653	N/A	N/A
structural_annotation	UHGV-1912854_53	PF13601,MF_01819,NF008565,COG1846	N/A	N/A	N/A	N/A
KOfam	UHGV-1912854_54	K22300	40.6	0.000000000049	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1912854_54	phrog_8	43.2	0.0000000000085	transcriptional regulator	transcription regulation
UniRef90	UHGV-1912854_54	UniRef90_A0A810Q1T1	100.0	4.67e-25	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1912854_54	46256.BBIK01000005_gene1058	53.1	0.000000347	PFAM helix-turn-helix domain protein	N/A
COG	UHGV-1912854_54	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-1912854_54	PF01381,MF_00535,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-1912854_56	K22300	43.1	0.0000000000081	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-1912854_56	phrog_8	43.5	0.0000000000064	transcriptional regulator	transcription regulation
UniRef90	UHGV-1912854_56	UniRef90_A0A810PZI0	86.3	5.76e-21	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-1912854_56	1461580.CCAS010000066_gene3994	50.8	0.000000608	Cro/C1-type HTH DNA-binding domain	N/A
Pfam	UHGV-1912854_56	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-1912854_56	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1912854_56	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1912854_57	1235835.C814_03153	74.3	7.72e-17	N/A	N/A
structural_annotation	UHGV-1912854_57	PF09035,NF040990	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_62	phrog_124	114.2	1.1e-33	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1912854_62	UniRef90_A0A2Z4QBI4	394.0	0	AAA domain protein	N/A
eggNOG-mapper	UHGV-1912854_62	445972.ANACOL_00146	228.0	0	AAA domain	N/A
Pfam	UHGV-1912854_62	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-1912854_62	COG1100	N/A	N/A	GTPase SAR1 family domain	N/A
structural_annotation	UHGV-1912854_62	PF13479,MF_00350,TIGR01618,COG0468	N/A	N/A	N/A	N/A
UniRef90	UHGV-1912854_63	UniRef90_A0A2Z4QA33	237.0	0	PD-(D/E)XK nuclease	N/A
eggNOG-mapper	UHGV-1912854_63	718252.FP2_01050	126.0	1.13e-33	N/A	N/A
structural_annotation	UHGV-1912854_63	PF10926,MF_03030,TIGR04328,COG4343	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_64	phrog_378	96.4	3.4e-28	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1912854_64	UniRef90_UPI001E43F9BA	71.2	0.00000000000111	N/A	N/A
eggNOG-mapper	UHGV-1912854_64	1423732.BALS01000134_gene393	65.5	0.0000000000437	N/A	N/A
structural_annotation	UHGV-1912854_64	PF05037,NF004948	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_65	phrog_5810	76.4	3.8e-22	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1912854_65	UniRef90_UPI00145BE7DD	105.0	1.16e-23	N/A	N/A
eggNOG-mapper	UHGV-1912854_65	742740.HMPREF9474_03117	191.0	0	N/A	N/A
structural_annotation	UHGV-1912854_65	PF01475,NF006999,COG0735	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_68	phrog_9298	57.3	1.7e-16	radical SAM domain protein	other
UniRef90	UHGV-1912854_68	UniRef90_A0A841L4D7	307.0	0	Radical SAM superfamily enzyme YgiQ (UPF0313 family)	N/A
eggNOG-mapper	UHGV-1912854_68	742738.HMPREF9460_03770	287.0	0	radical SAM domain protein	N/A
COG	UHGV-1912854_68	COG1032	N/A	N/A	Radical SAM superfamily enzyme YgiQ, UPF0313 family	N/A
structural_annotation	UHGV-1912854_68	PF04055,MF_01864,TIGR04072,COG0621	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_70	phrog_3136	136.8	7.00005e-41	N/A	unknown function
UniRef90	UHGV-1912854_70	UniRef90_UPI001CBCD733	131.0	2.31e-35	ASCH domain-containing protein	N/A
COG	UHGV-1912854_70	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-1912854_70	PF04266,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_71	phrog_38832	65.2	4.4e-19	N/A	unknown function
eggNOG-mapper	UHGV-1912854_71	665956.HMPREF1032_00143	61.6	0.00000000279	N/A	N/A
UniRef90	UHGV-1912854_76	UniRef90_A0A374AB28	195.0	0	Thymidylate synthase ThyX	N/A
eggNOG-mapper	UHGV-1912854_76	935948.KE386495_gene2250	95.5	2.43e-22	N/A	N/A
Pfam	UHGV-1912854_76	PF02511	N/A	N/A	Thymidylate synthase complementing protein	Thy1
structural_annotation	UHGV-1912854_76	PF02511,MF_01408,TIGR02170,COG1351	N/A	N/A	N/A	N/A
PHROG	UHGV-1912854_77	phrog_1770	59.9	4.9e-17	Holliday junction resolvase	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1912854_77	536233.CLO_1822	153.0	2.8026e-45	N/A	N/A
structural_annotation	UHGV-1912854_77	PF02075,MF_00034,NF000711,COG0817	N/A	N/A	N/A	N/A
UniRef90	UHGV-1912854_78	UniRef90_A9U7U9	100.0	6.57e-22	Predicted protein (Fragment)	N/A
eggNOG-mapper	UHGV-1912854_78	1444310.JANV01000162_gene1216	102.0	7.13e-24	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1912854	Yes	41,650	53	99	1
UHGV-1556679	No	11,310	51	27	1