vOTU vOTU-072654

vOTU: vOTU-072654

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072654
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00098 → vSUBFAM-00525 → vGENUS-01773 → vSUBGEN-01038 → vOTU-072654
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lutetiensis
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0094522
Biosample ID	SAMEA3449296
Genome length (bp)	23,329 bps
CheckV completeness	99.90% (High-quality)
CDS count	31
CDS density	90.76%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lutetiensis	Total connections	5	Host agreement	80
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp000432375	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0094522_1	K04763	153.7	1.4013e-45	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-0094522_1	phrog_1	144.8	7.49695e-43	integrase	integration and excision
UniRef90	UHGV-0094522_1	UniRef90_UPI001AB048AE	328.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-0094522_1	1378168.N510_01454	336.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0094522_1	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-0094522_1	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0094522_1	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0094522_1	PF00589,PF13495,MF_01808,TIGR02224,COG4973	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0094522_3	PF18903	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_4	phrog_15768	54.7	0.0000000000000026	N/A	unknown function
Pfam	UHGV-0094522_4	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-0094522_4	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
PHROG	UHGV-0094522_7	phrog_2412	52.2	0.000000000000001	N/A	unknown function
eggNOG-mapper	UHGV-0094522_7	556268.OFAG_00320	52.4	0.000000599	N/A	N/A
KOfam	UHGV-0094522_8	K06909	358.5	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0094522_8	phrog_3717	198.4	0	terminase large subunit	head and packaging
UniRef90	UHGV-0094522_8	UniRef90_A0A843HNT5	412.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0094522_8	86416.Clopa_1892	323.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0094522_8	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0094522_8	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0094522_8	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0094522_8	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0094522_8	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0094522_9	PF21226,TIGR04183,COG2372	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_14	phrog_64	366.8	0	portal protein	head and packaging
UniRef90	UHGV-0094522_14	UniRef90_A0A843HXP9	411.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0094522_14	552398.HMPREF0866_03118	207.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-0094522_14	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-0094522_14	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-0094522_14	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_15	phrog_115	161.6	0	minor head protein	head and packaging
UniRef90	UHGV-0094522_15	UniRef90_A0A843HRB0	155.0	1.06e-40	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0094522_15	397287.C807_03710	152.0	2.31004e-41	Type VI secretion system effector, Hcp	N/A
Pfam	UHGV-0094522_15	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-0094522_15	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-0094522_15	COG3157	N/A	N/A	Type VI protein secretion system component Hcp (secreted cytotoxin)	N/A
structural_annotation	UHGV-0094522_15	PF03496,PF04233,MF_04142,NF041404,TIGR01641,COG2369	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0094522_16	1514668.JOOA01000001_gene690	97.4	1.6e-25	N/A	N/A
PHROG	UHGV-0094522_17	phrog_172	99.2	5.5e-29	head scaffolding protein	head and packaging
UniRef90	UHGV-0094522_17	UniRef90_UPI00085C378A	148.0	6.02979e-42	N/A	N/A
eggNOG-mapper	UHGV-0094522_17	1071400.LBUCD034_0949	67.8	0.0000000000264	N/A	N/A
Pfam	UHGV-0094522_17	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-0094522_17	PF14265	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_18	phrog_544	69.9	2.8e-20	major head protein	head and packaging
UniRef90	UHGV-0094522_18	UniRef90_A0A6N3FT63	231.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-0094522_18	642492.Clole_0972	311.0	0	N/A	N/A
structural_annotation	UHGV-0094522_18	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_19	phrog_132	50.6	0.000000000000032	head-tail adaptor	connector
UniRef90	UHGV-0094522_19	UniRef90_A0A1M6EXQ4	65.1	0.0000000000108	Phage gp6-like head-tail connector protein	N/A
eggNOG-mapper	UHGV-0094522_19	1540257.JQMW01000009_gene3373	58.9	0.000000000459	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-0094522_19	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-0094522_19	PF05135,TIGR01560	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0094522_20	1280689.AUJC01000007_gene3314	54.7	0.000000021	N/A	N/A
structural_annotation	UHGV-0094522_20	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_21	phrog_5	96.1	4e-28	tail completion or Neck1 protein	connector
UniRef90	UHGV-0094522_21	UniRef90_A0A136Q8F4	110.0	3.56e-28	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-0094522_21	1280689.AUJC01000007_gene3313	103.0	2.21e-26	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-0094522_21	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-0094522_21	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0094522_21	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0094522_22	1120971.AUCA01000037_gene2903	50.1	0.00000357	N/A	N/A
structural_annotation	UHGV-0094522_22	PF09646,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_23	phrog_158	52.0	0.000000000000014	major tail protein	tail
UniRef90	UHGV-0094522_23	UniRef90_UPI0005906553	91.3	5.79e-21	tail protein	N/A
eggNOG-mapper	UHGV-0094522_23	1499683.CCFF01000017_gene2926	91.3	9.7e-22	Phage tail tube protein, TTP	N/A
structural_annotation	UHGV-0094522_23	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
UniRef90	UHGV-0094522_24	UniRef90_A0A0P0NA82	64.7	0.0000000000428	N/A	N/A
eggNOG-mapper	UHGV-0094522_24	1294142.CINTURNW_1697	84.3	1.36e-19	N/A	N/A
Pfam	UHGV-0094522_24	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-0094522_24	PF19591,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_25	phrog_2066	53.7	0.0000000000000042	N/A	unknown function
eggNOG-mapper	UHGV-0094522_25	1499683.CCFF01000017_gene2924	61.6	0.000000000081	N/A	N/A
KOfam	UHGV-0094522_26	K08757	47.7	0.0000000000000064	APOA1; apolipoprotein A-I	N/A
PHROG	UHGV-0094522_26	phrog_3981	269.4	0	tail length tape measure protein	tail
UniRef90	UHGV-0094522_26	UniRef90_UPI001F18B975	290.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0094522_26	536233.CLO_1577	288.0	0	tape measure	N/A
Pfam	UHGV-0094522_26	PF04513	N/A	N/A	Baculovirus polyhedron envelope protein, PEP, C terminus	Baculo_PEP_C
COG	UHGV-0094522_26	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-0094522_26	MF_04138	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0094522_27	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_28	phrog_15074	101.8	1.1e-30	N/A	unknown function
eggNOG-mapper	UHGV-0094522_28	411901.BACCAC_01130	134.0	1.33e-29	COG3209 Rhs family protein	N/A
COG	UHGV-0094522_28	COG4926	N/A	N/A	Phage-related protein	N/A
PHROG	UHGV-0094522_29	phrog_372	243.7	0	tail protein	tail
UniRef90	UHGV-0094522_29	UniRef90_UPI001373A0FD	211.0	0	N/A	N/A
eggNOG-mapper	UHGV-0094522_29	556261.HMPREF0240_01282	155.0	1.27e-37	N/A	N/A
Pfam	UHGV-0094522_29	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0094522_29	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0094522_29	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-0094522_31	phrog_13256	82.4	2.9e-24	N/A	unknown function
eggNOG-mapper	UHGV-0094522_31	1160721.RBI_II00522	74.3	7.06e-17	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0094522	Yes	23,329	40	100	1