vOTU vOTU-072657

vOTU: vOTU-072657

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072657
Number of genomes	29
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-00707 → vGENUS-04683 → vOTU-072657
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900548615
Host range breadth	Species
Lifestyle	temperate (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0117882
Biosample ID	SAMEA103958154
Genome length (bp)	41,974 bps
CheckV completeness	63.06% (Medium-quality)
CDS count	50
CDS density	92.01%
tRNA count	4
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia	Total connections	15	Host agreement	100
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-83 → CAG-83 sp900548615	Total connections	49	Host agreement	97.96

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 63.06)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0117882_1	1284680.HMPREF1627_06935	51.6	0.000000191	Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions	N/A
COG	UHGV-0117882_1	COG0459	N/A	N/A	Chaperonin GroEL (HSP60 family)	N/A
eggNOG-mapper	UHGV-0117882_2	1226322.HMPREF1545_00625	122.0	4.29e-31	N/A	N/A
KOfam	UHGV-0117882_3	K14059	161.8	0	int; integrase	N/A
PHROG	UHGV-0117882_3	phrog_1	166.7	0	integrase	integration and excision
UniRef90	UHGV-0117882_3	UniRef90_A0A1C5W824	521.0	0	Integrase	N/A
eggNOG-mapper	UHGV-0117882_3	693746.OBV_41260	300.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0117882_3	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0117882_3	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-0117882_3	PF00589,MF_01807,TIGR02224,COG4973	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_4	phrog_5783	280.5	0	N/A	unknown function
UniRef90	UHGV-0117882_4	UniRef90_A0A1C7FL48	310.0	0	Nuclease	N/A
eggNOG-mapper	UHGV-0117882_4	525255.HMPREF0077_1122	247.0	0	NYN domain	N/A
Pfam	UHGV-0117882_4	PF01936	N/A	N/A	NYN domain	NYN
COG	UHGV-0117882_4	COG1432	N/A	N/A	NYN domain, predicted PIN-related RNAse, tRNA/rRNA maturation	N/A
structural_annotation	UHGV-0117882_4	PF01936,MF_04140,TIGR00288,COG1432	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_5	K22300	56.0	8.8e-16	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0117882_5	phrog_2439	45.1	0.0000000000012	transcriptional regulator	transcription regulation
UniRef90	UHGV-0117882_5	UniRef90_UPI0014126470	77.0	1.4e-16	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0117882_5	658655.HMPREF0988_01045	78.6	6.74e-17	Helix-turn-helix domain	N/A
Pfam	UHGV-0117882_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0117882_5	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0117882_5	PF13560,MF_00535,NF007257,COG1396	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_6	phrog_3292	45.2	0.0000000000015	N/A	unknown function
UniRef90	UHGV-0117882_6	UniRef90_UPI0018AD0A6B	57.0	0.0000000234	KTSC domain-containing protein	N/A
eggNOG-mapper	UHGV-0117882_6	1173028.ANKO01000174_gene2719	56.6	0.0000000296	KTSC domain	N/A
Pfam	UHGV-0117882_6	PF13619	N/A	N/A	KTSC domain	KTSC
COG	UHGV-0117882_6	COG4249	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117882_6	PF13619	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_8	K22300	64.5	2e-18	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0117882_8	phrog_4	120.4	1.8e-35	transcriptional repressor	transcription regulation
UniRef90	UHGV-0117882_8	UniRef90_UPI001C119F77	296.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0117882_8	693746.OBV_01960	267.0	0	Peptidase S24-like	N/A
Pfam	UHGV-0117882_8	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0117882_8	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0117882_8	COG0864	N/A	N/A	Metal-responsive transcriptional regulator, contains CopG/Arc/MetJ DNA-binding domain	N/A
structural_annotation	UHGV-0117882_8	PF00717,PF01381,MF_00015,NF007621,NF041951,COG2932	N/A	N/A	N/A	N/A
UniRef90	UHGV-0117882_9	UniRef90_A0A357NGY1	86.7	5.09e-21	XRE family transcriptional regulator	N/A
Pfam	UHGV-0117882_9	PF20432	N/A	N/A	Antitoxin Xre-like helix-turn-helix domain	Xre-like-HTH
structural_annotation	UHGV-0117882_9	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117882_11	PF13601,MF_01819,TIGR02337,COG3432	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117882_12	PF11112,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_14	K07319	99.7	1.9e-29	yhdJ; adenine-specific DNA-methyltransferase [EC:2.1.1.72]	N/A
PHROG	UHGV-0117882_14	phrog_16	223.4	0	DNA helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117882_14	UniRef90_A0A1Q6JHY3	1680.0	0	DNA methylase N-4	N/A
eggNOG-mapper	UHGV-0117882_14	1007096.BAGW01000031_gene119	1333.0	0	DEAD-like helicases superfamily	N/A
Pfam	UHGV-0117882_14	PF00176	N/A	N/A	SNF2-related domain	SNF2-rel_dom
Pfam	UHGV-0117882_14	PF01555	N/A	N/A	DNA methylase	N6_N4_Mtase
COG	UHGV-0117882_14	COG0553	N/A	N/A	Superfamily II DNA or RNA helicase, SNF2 family	N/A
structural_annotation	UHGV-0117882_14	PF01555,PF16203,PF04851,MF_01821,MF_00472,NF041790,NF008572,COG0553,COG0863	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_17	phrog_997	96.2	2.9e-28	replication terminator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117882_17	UniRef90_R6MCS9	101.0	1.9e-25	N/A	N/A
eggNOG-mapper	UHGV-0117882_17	1519439.JPJG01000059_gene1910	127.0	3.55e-36	N/A	N/A
PHROG	UHGV-0117882_18	phrog_1029	153.8	1.4013e-45	N/A	unknown function
eggNOG-mapper	UHGV-0117882_18	552398.HMPREF0866_01625	124.0	5.97e-32	N/A	N/A
structural_annotation	UHGV-0117882_18	PF10065,COG5532	N/A	N/A	N/A	N/A
UniRef90	UHGV-0117882_21	UniRef90_A0A845QLQ8	184.0	0	N/A	N/A
eggNOG-mapper	UHGV-0117882_21	33035.JPJF01000135_gene5082	121.0	1.25e-31	N/A	N/A
structural_annotation	UHGV-0117882_21	PF06378,TIGR00607,COG5055	N/A	N/A	N/A	N/A
UniRef90	UHGV-0117882_22	UniRef90_B0PAM4	156.0	4.2039e-45	YqaJ domain-containing protein	N/A
structural_annotation	UHGV-0117882_22	PF09588,MF_03030,TIGR03033,COG5377	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_23	phrog_72	60.0	1.1e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117882_23	UniRef90_A0A8D9PDS2	194.0	0	NinB protein	N/A
eggNOG-mapper	UHGV-0117882_23	445972.ANACOL_01825	120.0	3.55e-32	N/A	N/A
Pfam	UHGV-0117882_23	PF05772	N/A	N/A	NinB protein	NinB
structural_annotation	UHGV-0117882_23	PF05772	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_24	phrog_374	41.5	0.000000000011	HNH endonuclease	DNA, RNA and nucleotide metabolism
PHROG	UHGV-0117882_25	phrog_7566	84.9	6.5e-25	N/A	unknown function
UniRef90	UHGV-0117882_25	UniRef90_A0A8D9UHC0	126.0	3.99e-36	Recombination enhancement function protein nuclease	N/A
eggNOG-mapper	UHGV-0117882_25	1007096.BAGW01000031_gene114	103.0	1.18e-27	N/A	N/A
PHROG	UHGV-0117882_26	phrog_4973	64.5	1.7e-18	N/A	unknown function
UniRef90	UHGV-0117882_26	UniRef90_A0A3D3Y0P8	84.3	6.86e-20	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0117882_26	1072685.IX83_07155	55.8	0.00000000147	Helix-turn-helix domain	N/A
Pfam	UHGV-0117882_26	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0117882_26	PF14090,NF040939,COG4738	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_27	K03111	141.4	9.99967e-42	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0117882_27	phrog_44	138.7	3.80004e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117882_27	UniRef90_A0A1Q6R0X3	206.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0117882_27	1226322.HMPREF1545_04080	202.0	0	Single-strand binding protein family	N/A
Pfam	UHGV-0117882_27	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0117882_27	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0117882_27	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0117882_27	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0117882_27	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117882_28	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_29	phrog_4632	44.1	0.00000000000019	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0117882_29	UniRef90_A0A7X8IB41	123.0	5.37e-34	RusA family crossover junction endodeoxyribonuclease	N/A
eggNOG-mapper	UHGV-0117882_29	469604.HMPREF0946_00819	66.6	0.00000000000206	N/A	N/A
structural_annotation	UHGV-0117882_29	PF19595,NF007305,COG4570	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_31	K00558	220.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0117882_31	phrog_116	258.3	0	DNA methyltransferase	other
UniRef90	UHGV-0117882_31	UniRef90_A0A350THX9	860.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0117882_31	1121334.KB911073_gene1852	671.0	0	Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family	N/A
PADLOC	UHGV-0117882_31	MTase_II_00164	102.3	1.1e-34	Type II methyltransferase	RM
Pfam	UHGV-0117882_31	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0117882_31	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0117882_31	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_32	phrog_2245	93.8	1.6e-27	nucleoside triphosphate pyrophosphohydrolase	other
eggNOG-mapper	UHGV-0117882_32	293826.Amet_2596	89.4	1.65e-20	N/A	N/A
structural_annotation	UHGV-0117882_32	NF001611,COG1694	N/A	N/A	N/A	N/A
UniRef90	UHGV-0117882_36	UniRef90_UPI0018AC41F1	169.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0117882_36	1226322.HMPREF1545_00042	152.0	0	N/A	N/A
structural_annotation	UHGV-0117882_36	PF13542	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_37	K06909	123.7	2e-36	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0117882_37	phrog_979	127.1	5.8e-39	terminase large subunit	head and packaging
UniRef90	UHGV-0117882_37	UniRef90_A0A810Q5R0	613.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0117882_37	1410650.JHWL01000003_gene2834	585.0	0	N/A	N/A
Pfam	UHGV-0117882_37	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-0117882_37	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0117882_37	PF04466,PF20454,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_38	phrog_156	296.5	0	portal protein	head and packaging
eggNOG-mapper	UHGV-0117882_38	1410650.JHWL01000003_gene2833	539.0	0	N/A	N/A
structural_annotation	UHGV-0117882_38	PF16510,MF_04120,TIGR01538,COG4695	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_39	K07584	51.7	0.000000000000017	N/A	N/A
PHROG	UHGV-0117882_39	phrog_4478	58.2	9e-17	peptidase	other
UniRef90	UHGV-0117882_39	UniRef90_UPI00102FFAFD	60.1	0.00000000138	ribosomal-processing cysteine protease Prp	N/A
Pfam	UHGV-0117882_39	PF04327	N/A	N/A	Cysteine protease Prp	Peptidase_Prp
COG	UHGV-0117882_39	COG2868	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117882_39	PF04327,NF011133,COG2868	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_40	phrog_13908	186.9	0	N/A	unknown function
eggNOG-mapper	UHGV-0117882_40	1410650.JHWL01000003_gene2831	103.0	1.54e-22	N/A	N/A
PHROG	UHGV-0117882_41	phrog_1357	195.3	0	major head protein	head and packaging
UniRef90	UHGV-0117882_41	UniRef90_A0A2V2CFL5	577.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0117882_41	1410650.JHWL01000003_gene2830	206.0	0	N/A	N/A
NCBIFam	UHGV-0117882_41	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0117882_41	PF13252,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_43	phrog_12105	129.4	1.5e-38	N/A	unknown function
eggNOG-mapper	UHGV-0117882_43	1226322.HMPREF1545_03850	85.9	7.11e-20	N/A	N/A
PHROG	UHGV-0117882_44	phrog_511	258.3	0	internal virion protein	head and packaging
eggNOG-mapper	UHGV-0117882_44	1410650.JHWL01000003_gene2827	340.0	0	N/A	N/A
structural_annotation	UHGV-0117882_44	PF11134,TIGR03300,NF038126,COG1520	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0117882_45	NF038340	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_46	phrog_372	166.3	0	tail protein	tail
UniRef90	UHGV-0117882_46	UniRef90_UPI001D0897E0	136.0	2.8e-30	N/A	N/A
eggNOG-mapper	UHGV-0117882_46	658088.HMPREF0987_01104	137.0	2.61e-31	the current gene model (or a revised gene model) may contain a frame shift	N/A
Pfam	UHGV-0117882_46	PF05895	N/A	N/A	N/A	DUF859
COG	UHGV-0117882_46	COG4675	N/A	N/A	Phage tail collar domain	N/A
KOfam	UHGV-0117882_47	K22519	40.1	0.000000000056	PTAC5; protein disulfide-isomerase [EC:5.3.4.1]	N/A
PHROG	UHGV-0117882_47	phrog_2649	63.0	7.8e-18	endolysin	lysis
UniRef90	UHGV-0117882_47	UniRef90_A0A645A9U3	155.0	1.35e-39	PG_binding_1 domain-containing protein	N/A
eggNOG-mapper	UHGV-0117882_47	1410650.JHWL01000003_gene2815	114.0	3.6e-25	N/A	N/A
Pfam	UHGV-0117882_47	PF01471	N/A	N/A	Putative peptidoglycan binding domain	PG_binding_1
structural_annotation	UHGV-0117882_47	PF01471,TIGR02869,COG3409	N/A	N/A	N/A	N/A
PHROG	UHGV-0117882_48	phrog_22978	111.2	0	N/A	unknown function
UniRef90	UHGV-0117882_48	UniRef90_A0A316M336	956.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0117882_48	693746.OBV_01590	501.0	0	N/A	N/A
structural_annotation	UHGV-0117882_49	PF01835,NF005176,COG5456	N/A	N/A	N/A	N/A
KOfam	UHGV-0117882_50	K16628	163.7	0	COL7A; collagen type VII alpha	N/A
PHROG	UHGV-0117882_50	phrog_819	133.2	0	tail protein	tail
eggNOG-mapper	UHGV-0117882_50	1203606.HMPREF1526_02029	77.4	0.00000000000129	Collagen triple helix repeat (20 copies)	N/A
Pfam	UHGV-0117882_50	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
Pfam	UHGV-0117882_50	PF17891	N/A	N/A	Mu-like prophage FluMu N-terminal domain	FluMu_N
COG	UHGV-0117882_50	COG1409	N/A	N/A	3',5'-cyclic AMP phosphodiesterase CpdA	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0117882	Yes	41,974	59	63	1
UHGV-1509361	No	39,903	58	91	1
UHGV-1543662	No	36,157	58	80	1
UHGV-1535280	No	34,930	58	79	1
UHGV-1541865	No	34,613	58	77	1
UHGV-1544932	No	31,709	58	72	1
UHGV-2131032	No	29,969	59	67	1
UHGV-1488027	No	27,622	59	65	1
UHGV-0114158	No	28,274	58	64	1
UHGV-1482498	No	27,887	59	63	1
UHGV-1446661	No	24,918	60	59	1
UHGV-1524898	No	26,712	58	59	1
UHGV-1446168	No	24,559	60	58	1
UHGV-1523522	No	25,939	59	58	1
UHGV-1485360	No	36,582	58	57	1
UHGV-1464072	No	22,562	59	53	1
UHGV-0039208	No	21,258	60	50	1
UHGV-1770028	No	18,310	60	43	1
UHGV-1605093	No	18,214	59	43	1
UHGV-1586193	No	17,101	59	40	1
UHGV-1583758	No	17,030	59	40	1
UHGV-1794906	No	16,626	59	39	1
UHGV-1799290	No	13,025	59	31	1
UHGV-1766630	No	13,697	56	30	1
UHGV-1562468	No	11,983	60	28	1
UHGV-1689628	No	10,770	60	25	1
UHGV-1857910	No	11,330	55	24	1
UHGV-1846008	No	10,622	58	23	1
UHGV-1845760	No	10,524	58	23	1