vOTU vOTU-072692

vOTU: vOTU-072692

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072692
Number of genomes	1
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00005 → vSUBFAM-01017 → vGENUS-01009 → vSUBGEN-00667 → vOTU-072692
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → UBA738 → UBA738 sp003522945
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0098952
Biosample ID	SAMEA3449292
Genome length (bp)	28,880 bps
CheckV completeness	97.46% (High-quality)
CDS count	46
CDS density	94.29%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → UBA738 → UBA738 sp003522945	Total connections	108	Host agreement	97.22
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → UBA738 → UBA738 sp003522945	Total connections	3	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.46)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0098952_1	K07726	44.9	0.0000000000023	K07726; putative transcriptional regulator	N/A
PHROG	UHGV-0098952_1	phrog_2104	42.7	0.0000000000099	N/A	unknown function
UniRef90	UHGV-0098952_1	UniRef90_V8C5J4	62.4	0.0000000000131	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0098952_1	471875.RUMLAC_02311	62.4	0.0000000000022	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0098952_1	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0098952_1	COG2944	N/A	N/A	DNA-binding transcriptional regulator YiaG, XRE-type HTH domain	N/A
structural_annotation	UHGV-0098952_1	PF15731,NF007481,COG2944	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_3	phrog_1129	81.1	8.7e-24	holin	lysis
UniRef90	UHGV-0098952_3	UniRef90_A0A3D4QXE9	105.0	4.78e-28	Enolase	N/A
eggNOG-mapper	UHGV-0098952_3	1007096.BAGW01000036_gene2663	97.8	1.54e-25	Phage holin family Hol44, in holin superfamily V	N/A
Pfam	UHGV-0098952_3	PF16079	N/A	N/A	Phage holin family Hol44, in holin superfamily V	Phage_holin_5_2
structural_annotation	UHGV-0098952_3	PF06946	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0098952_4	33035.JPJF01000023_gene3222	58.9	0.00000000027	N/A	N/A
KOfam	UHGV-0098952_5	K07273	126.0	4.3e-37	acm; lysozyme	N/A
PHROG	UHGV-0098952_5	phrog_291	121.4	1e-35	endolysin	lysis
UniRef90	UHGV-0098952_5	UniRef90_A0A3D2G0D9	464.0	0	Cpl-7 domain-containing protein	N/A
eggNOG-mapper	UHGV-0098952_5	1123263.AUKY01000068_gene486	160.0	0	Glycosyl hydrolases family 25	N/A
Pfam	UHGV-0098952_5	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
Pfam	UHGV-0098952_5	PF08230	N/A	N/A	CW_7 repeat	CW_7
COG	UHGV-0098952_5	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-0098952_5	PF01183,COG3757	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0098952_8	PF14594,TIGR01646,COG4926	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_9	phrog_13564	40.3	0.000000000036	minor tail protein	tail
structural_annotation	UHGV-0098952_9	PF16774,PF20753,TIGR01633,COG4722	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_10	phrog_5493	118.3	4.8e-35	tail length tape measure protein	tail
COG	UHGV-0098952_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
structural_annotation	UHGV-0098952_11	PF11836,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_12	phrog_88	57.9	1.3e-16	major tail protein	tail
UniRef90	UHGV-0098952_12	UniRef90_R5EB96	170.0	0	Phage major tail protein phi13 family	N/A
structural_annotation	UHGV-0098952_12	PF04630,TIGR01603,COG3498	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_13	phrog_5	62.8	7.6e-18	tail completion or Neck1 protein	connector
eggNOG-mapper	UHGV-0098952_13	1203606.HMPREF1526_00974	76.3	0.00000000000000114	N/A	N/A
NCBIFam	UHGV-0098952_13	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-0098952_13	TIGR01725	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0098952_14	PF11367,MF_00632	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0098952_15	349161.Dred_2602	53.5	0.000000152	N/A	N/A
structural_annotation	UHGV-0098952_15	PF05521,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_16	phrog_2550	47.8	0.00000000000018	N/A	unknown function
eggNOG-mapper	UHGV-0098952_16	588581.Cpap_1271	50.8	0.00000063	N/A	N/A
PHROG	UHGV-0098952_17	phrog_10	89.0	5e-26	major head protein	head and packaging
UniRef90	UHGV-0098952_17	UniRef90_A0A1C5W5F9	186.0	0	Phage major capsid protein, HK97 family	N/A
eggNOG-mapper	UHGV-0098952_17	324057.Pjdr2_1543	97.1	3.73e-19	Phage capsid family	N/A
Pfam	UHGV-0098952_17	PF05065	N/A	N/A	Phage capsid family	Phage_capsid
NCBIFam	UHGV-0098952_17	TIGR01554.2	N/A	N/A	phage major capsid protein	N/A
structural_annotation	UHGV-0098952_17	PF05065,MF_04119,TIGR01554,COG4653	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_18	K06904	147.6	1.20512e-43	N/A	N/A
PHROG	UHGV-0098952_18	phrog_80	172.4	0	head maturation protease	head and packaging
UniRef90	UHGV-0098952_18	UniRef90_A0A316NLC8	225.0	0	HK97 family phage prohead protease	N/A
eggNOG-mapper	UHGV-0098952_18	398512.JQKC01000009_gene450	211.0	0	Phage prohead protease, HK97 family	N/A
Pfam	UHGV-0098952_18	PF04586	N/A	N/A	Caudovirus prohead serine protease	Peptidase_S78
NCBIFam	UHGV-0098952_18	TIGR01543.1	N/A	N/A	HK97 family phage prohead protease	N/A
COG	UHGV-0098952_18	COG3740	N/A	N/A	Phage head maturation protease	N/A
structural_annotation	UHGV-0098952_18	PF04586,TIGR01543,COG3740	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_19	phrog_12	168.2	0	portal protein	head and packaging
UniRef90	UHGV-0098952_19	UniRef90_R5ENV9	414.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-0098952_19	491915.Aflv_0662	372.0	0	Phage portal protein	N/A
Pfam	UHGV-0098952_19	PF04860	N/A	N/A	Phage portal protein	Phage_portal
NCBIFam	UHGV-0098952_19	TIGR01537.1	N/A	N/A	phage portal protein	N/A
COG	UHGV-0098952_19	COG4695	N/A	N/A	Phage portal protein BeeE	N/A
structural_annotation	UHGV-0098952_19	PF04860,MF_04120,TIGR01537,COG4695	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_20	phrog_9	233.7	0	terminase large subunit	head and packaging
UniRef90	UHGV-0098952_20	UniRef90_R5EM34	729.0	0	Phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0098952_20	1226322.HMPREF1545_00113	507.0	0	Phage Terminase	N/A
Pfam	UHGV-0098952_20	PF20441	N/A	N/A	Terminase large subunit, endonuclease domain	TerL_nuclease
COG	UHGV-0098952_20	COG4626	N/A	N/A	Phage terminase-like protein, large subunit, contains N-terminal HTH domain	N/A
structural_annotation	UHGV-0098952_20	PF20441,PF03354,MF_04013,TIGR01547,COG4626	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0098952_21	PF05119,TIGR01558,COG3747	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-0098952_22	693746.OBV_19990	58.9	0.00000000191	Phage terminase, small subunit	N/A
COG	UHGV-0098952_22	COG3747	N/A	N/A	Phage terminase, small subunit	N/A
KOfam	UHGV-0098952_23	K03497	41.2	0.000000000022	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0098952_23	phrog_21498	273.8	0	N/A	unknown function
UniRef90	UHGV-0098952_23	UniRef90_C7MM70	308.0	0	ParB-like nuclease	N/A
eggNOG-mapper	UHGV-0098952_23	469378.Ccur_02830	308.0	0	DNA binding	N/A
PADLOC	UHGV-0098952_23	MTase_II_00015	122.0	7.6e-36	Type II methyltransferase	RM
Pfam	UHGV-0098952_23	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0098952_23	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0098952_23	PF02195,PF05869,MF_02015,TIGR00180,TIGR01712,COG5119	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_24	phrog_119	62.8	5.2e-18	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098952_24	UniRef90_U4QWM3	110.0	1.21e-29	HNH endonuclease	N/A
eggNOG-mapper	UHGV-0098952_24	588581.Cpap_1277	111.0	1.01e-30	HNH nucleases	N/A
COG	UHGV-0098952_24	COG1403	N/A	N/A	5-methylcytosine-specific restriction endonuclease McrA	N/A
structural_annotation	UHGV-0098952_24	TIGR02646	N/A	N/A	N/A	N/A
Pfam	UHGV-0098952_25	PF14205	N/A	N/A	Cysteine-rich KTR	Cys_rich_KTR
PHROG	UHGV-0098952_26	phrog_3584	151.9	4.2039e-45	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-0098952_26	1203606.HMPREF1526_00985	174.0	0	N/A	N/A
structural_annotation	UHGV-0098952_26	PF01446,NF041486	N/A	N/A	N/A	N/A
Pfam	UHGV-0098952_29	PF04448	N/A	N/A	N/A	DUF551
UniRef90	UHGV-0098952_31	UniRef90_UPI001D08CA4B	61.6	0.000000000306	N/A	N/A
Pfam	UHGV-0098952_31	PF12957	N/A	N/A	N/A	DUF3846
COG	UHGV-0098952_31	COG4734	N/A	N/A	Antirestriction protein ArdA	N/A
structural_annotation	UHGV-0098952_31	PF12957	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_32	K03497	92.7	7.7e-27	parB, spo0J; ParB family transcriptional regulator, chromosome partitioning protein	N/A
PHROG	UHGV-0098952_32	phrog_27290	154.2	0	N/A	unknown function
UniRef90	UHGV-0098952_32	UniRef90_A0A1S1V8H7	142.0	7.37e-36	Nucleoid occlusion protein	N/A
eggNOG-mapper	UHGV-0098952_32	1196322.A370_05736	132.0	7.15e-33	Belongs to the ParB family	N/A
Pfam	UHGV-0098952_32	PF02195	N/A	N/A	ParB/Sulfiredoxin domain	ParBc
COG	UHGV-0098952_32	COG1475	N/A	N/A	Chromosome segregation protein Spo0J, contains ParB-like nuclease domain	N/A
structural_annotation	UHGV-0098952_32	PF02195,MF_02015,TIGR04285,COG1475	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_33	K03496	220.2	0	parA, soj; chromosome partitioning protein	N/A
PHROG	UHGV-0098952_33	phrog_164	172.3	0	ParA-like partition protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098952_33	UniRef90_A0A2N2CMQ6	199.0	0	AAA_31 domain-containing protein	N/A
eggNOG-mapper	UHGV-0098952_33	411463.EUBVEN_00461	169.0	0	CobQ CobB MinD ParA nucleotide binding domain	N/A
Pfam	UHGV-0098952_33	PF13614	N/A	N/A	AAA domain	AAA_31
COG	UHGV-0098952_33	COG1192	N/A	N/A	ParA-like ATPase involved in chromosome/plasmid partitioning or cellulose biosynthesis protein BcsQ	N/A
structural_annotation	UHGV-0098952_33	PF13614,MF_00533,TIGR03453,COG1192	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0098952_34	PF01157	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_35	K02314	266.0	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0098952_35	phrog_19	245.7	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098952_35	UniRef90_A0A3D1V9Y4	308.0	0	DNA helicase	N/A
eggNOG-mapper	UHGV-0098952_35	1007096.BAGW01000033_gene1616	227.0	0	DnaB-like helicase N terminal domain	N/A
Pfam	UHGV-0098952_35	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0098952_35	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0098952_35	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0098952_35	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_36	phrog_270	106.1	4.9e-31	replication initiation protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0098952_36	UniRef90_UPI001F33ADD3	178.0	0	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0098952_36	1121115.AXVN01000075_gene2085	121.0	4.94e-30	N/A	N/A
Pfam	UHGV-0098952_36	PF13730	N/A	N/A	Helix-turn-helix domain	HTH_36
COG	UHGV-0098952_36	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0098952_36	PF02295,MF_01819,TIGR04176,COG3355	N/A	N/A	N/A	N/A
PHROG	UHGV-0098952_38	phrog_66	45.7	0.0000000000017	excisionase and transcriptional regulator	integration and excision
Pfam	UHGV-0098952_38	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0098952_38	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
COG	UHGV-0098952_38	COG1910	N/A	N/A	Periplasmic molybdate-binding protein/domain	N/A
structural_annotation	UHGV-0098952_38	PF12728,MF_01155,TIGR01764,COG3311	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_39	K22300	42.2	0.000000000012	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0098952_39	phrog_6499	120.9	5.4e-36	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098952_39	UniRef90_A0A2N2CPV3	122.0	1.41e-32	Transcriptional regulator	N/A
eggNOG-mapper	UHGV-0098952_39	742738.HMPREF9460_04043	109.0	3.72e-28	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0098952_39	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0098952_39	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0098952_39	PF01381,MF_00535,NF040522,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_40	K07729	49.0	0.00000000000014	K07729; putative transcriptional regulator	N/A
PHROG	UHGV-0098952_40	phrog_8	40.5	0.000000000061	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098952_40	UniRef90_A0A645JJK5	60.5	0.000000000114	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0098952_40	1321773.HMPREF9069_01034	49.7	0.0000018	peptidyl-tyrosine sulfation	N/A
Pfam	UHGV-0098952_40	PF13560	N/A	N/A	Helix-turn-helix domain	HTH_31
COG	UHGV-0098952_40	COG1813	N/A	N/A	Archaeal ribosome-binding protein aMBF1, putative translation factor, contains Zn-ribbon and HTH domains	N/A
structural_annotation	UHGV-0098952_40	PF01381,NF041951,COG1396	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_43	K22299	47.4	0.00000000000043	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0098952_43	phrog_8	59.6	7.5e-17	transcriptional regulator	transcription regulation
UniRef90	UHGV-0098952_43	UniRef90_A0A1V5LXR1	67.8	0.00000000000398	HTH-type transcriptional regulator ImmR	N/A
eggNOG-mapper	UHGV-0098952_43	509191.AEDB02000081_gene2360	70.1	0.000000000000109	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0098952_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0098952_43	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0098952_43	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
COG	UHGV-0098952_44	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0098952_44	PF13443,TIGR03070,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0098952_46	K14059	177.4	0	int; integrase	N/A
PHROG	UHGV-0098952_46	phrog_1	152.8	2.8026e-45	integrase	integration and excision
UniRef90	UHGV-0098952_46	UniRef90_A0A3D1VH24	232.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0098952_46	1297617.JPJD01000022_gene1664	206.0	0	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0098952_46	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0098952_46	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0098952_46	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0098952_46	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0098952	Yes	28,880	63	97	1