vOTU vOTU-072711

vOTU: vOTU-072711

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072711
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00025 → vSUBFAM-04883 → vGENUS-09366 → vSUBGEN-10857 → vOTU-072711
Host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-0000683
Biosample ID	SAMEA4766064
Genome length (bp)	37,307 bps
CheckV completeness	97.72% (High-quality)
CDS count	62
CDS density	93.43%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → TANB77 → CAG-508 → CAG-492 → CAG-492 sp000434335	Total connections	102	Host agreement	81.37
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 97.72)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-0000683_1	UniRef90_A0A1Q6LC62	436.0	0	SH3b domain-containing protein	N/A
eggNOG-mapper	UHGV-0000683_1	1121422.AUMW01000009_gene3264	115.0	5.91e-27	Papain-like cysteine protease AvrRpt2	N/A
Pfam	UHGV-0000683_1	PF13529	N/A	N/A	Peptidase_C39 like family	Peptidase_C39_2
Pfam	UHGV-0000683_1	PF08239	N/A	N/A	Bacterial SH3 domain	SH3_3
COG	UHGV-0000683_1	COG0768	N/A	N/A	Cell division protein FtsI, peptidoglycan transpeptidase (Penicillin-binding protein 2)	N/A
structural_annotation	UHGV-0000683_1	PF03412,PF08239,NF040678,COG3807,COG3271	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_2	phrog_689	59.2	6.3e-17	holin	lysis
UniRef90	UHGV-0000683_2	UniRef90_UPI0004512484	72.8	0.00000000000000303	hemolysin XhlA family protein	N/A
eggNOG-mapper	UHGV-0000683_2	1230342.CTM_14513	72.8	5.09e-16	Haemolysin XhlA	N/A
Pfam	UHGV-0000683_2	PF10779	N/A	N/A	Haemolysin XhlA	XhlA
PHROG	UHGV-0000683_3	phrog_2310	47.1	0.00000000000022	N/A	unknown function
eggNOG-mapper	UHGV-0000683_3	632245.CLP_2682	49.7	0.000000282	N/A	N/A
PHROG	UHGV-0000683_6	phrog_9116	138.9	3.00004e-41	tail protein	tail
UniRef90	UHGV-0000683_6	UniRef90_A0A3D1PJI0	216.0	0	Collar domain-containing protein	N/A
eggNOG-mapper	UHGV-0000683_6	694427.Palpr_1970	141.0	3.14e-34	tail collar domain protein	N/A
Pfam	UHGV-0000683_6	PF07484	N/A	N/A	Phage Tail Collar Domain	Collar
COG	UHGV-0000683_6	COG4675	N/A	N/A	Phage tail collar domain	N/A
structural_annotation	UHGV-0000683_6	PF07484,COG4675	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_7	phrog_5555	48.8	0.00000000000006	tail protein	tail
UniRef90	UHGV-0000683_7	UniRef90_R6HDY9	164.0	0	Staphylococcus haemolyticus JCSC1435 DNA complete genome	N/A
eggNOG-mapper	UHGV-0000683_7	1444306.JFZC01000034_gene2622	57.8	0.000000407	Prophage endopeptidase tail	N/A
Pfam	UHGV-0000683_7	PF13884	N/A	N/A	Chaperone of endosialidase	Peptidase_S74
COG	UHGV-0000683_7	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
UniRef90	UHGV-0000683_8	UniRef90_R6H354	214.0	0	Carbohydrate binding domain protein	N/A
eggNOG-mapper	UHGV-0000683_8	469596.HMPREF9488_01330	177.0	2.66247e-44	N/A	N/A
structural_annotation	UHGV-0000683_8	PF16466,TIGR03361,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_9	phrog_1194	48.0	0.00000000000019	N/A	unknown function
structural_annotation	UHGV-0000683_9	PF20458,TIGR01633,COG4718	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_10	phrog_1535	54.9	6.8e-16	tail length tape measure protein	tail
COG	UHGV-0000683_10	COG5280	N/A	N/A	Phage-related minor tail protein	N/A
PHROG	UHGV-0000683_12	phrog_706	102.1	5.4e-30	N/A	unknown function
UniRef90	UHGV-0000683_12	UniRef90_UPI00067E77F7	110.0	5.63e-27	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0000683_12	469596.HMPREF9488_01327	98.2	3.96e-23	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0000683_12	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0000683_12	PF06854	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000683_13	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_14	phrog_6148	70.1	3e-20	beta-lactamase-inhibitor protein BLIP	moron, auxiliary metabolic gene and host takeover
UniRef90	UHGV-0000683_14	UniRef90_UPI001D070936	85.9	1.78e-18	N/A	N/A
eggNOG-mapper	UHGV-0000683_14	1449050.JNLE01000005_gene4075	79.0	6.03e-17	N/A	N/A
Pfam	UHGV-0000683_14	PF13248	N/A	N/A	zinc-ribbon domain	zf-ribbon_3
Pfam	UHGV-0000683_14	PF12978	N/A	N/A	N/A	DUF3862
structural_annotation	UHGV-0000683_14	PF12978,PF10571,MF_00925,NF008423,COG2913	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_15	phrog_3099	100.4	1.6e-29	N/A	unknown function
eggNOG-mapper	UHGV-0000683_15	469596.HMPREF9488_01325	97.4	7.25e-23	N/A	N/A
structural_annotation	UHGV-0000683_15	PF09393,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_16	phrog_3266	114.1	7.9e-34	tail completion	connector
UniRef90	UHGV-0000683_16	UniRef90_UPI001CF15A1F	92.4	3.75e-21	chloramphenicol resistance protein	N/A
eggNOG-mapper	UHGV-0000683_16	573061.Clocel_3537	82.8	3.04e-18	N/A	N/A
structural_annotation	UHGV-0000683_16	PF12691	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_17	phrog_556	63.9	2.1e-18	minor head protein	head and packaging
UniRef90	UHGV-0000683_17	UniRef90_UPI00189CE0C6	96.7	9.01e-23	minor capsid protein	N/A
eggNOG-mapper	UHGV-0000683_17	1304866.K413DRAFT_3041	92.4	6.46e-22	N/A	N/A
structural_annotation	UHGV-0000683_17	PF11114	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_18	phrog_3366	74.4	1.7e-21	N/A	unknown function
eggNOG-mapper	UHGV-0000683_18	632245.CLP_1651	54.7	0.000000138	N/A	N/A
Pfam	UHGV-0000683_18	PF20536	N/A	N/A	N/A	DUF6751
structural_annotation	UHGV-0000683_18	PF20536,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_19	phrog_541	83.3	2.3e-24	head-tail adaptor	connector
eggNOG-mapper	UHGV-0000683_19	411470.RUMGNA_02220	68.9	0.000000000000376	N/A	N/A
PHROG	UHGV-0000683_20	phrog_544	253.5	0	major head protein	head and packaging
UniRef90	UHGV-0000683_20	UniRef90_UPI000E5CD0B7	451.0	0	N4-gp56 family major capsid protein	N/A
eggNOG-mapper	UHGV-0000683_20	411471.SUBVAR_06940	266.0	0	N/A	N/A
NCBIFam	UHGV-0000683_20	TIGR04387.1	N/A	N/A	N4-gp56 family major capsid protein	N/A
structural_annotation	UHGV-0000683_20	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_21	phrog_194	89.4	4.5e-26	head scaffolding protein	head and packaging
UniRef90	UHGV-0000683_21	UniRef90_R6XV28	265.0	0	Phage minor structural protein GP20	N/A
eggNOG-mapper	UHGV-0000683_21	1111454.HMPREF1250_0176	75.5	0.0000000000000299	Phage minor structural protein GP20	N/A
Pfam	UHGV-0000683_21	PF06810	N/A	N/A	Phage minor structural protein GP20	Phage_GP20
structural_annotation	UHGV-0000683_21	PF06810,MF_02110	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000683_22	PF09871,TIGR00739,COG1862	N/A	N/A	N/A	N/A
UniRef90	UHGV-0000683_23	UniRef90_F5RJP5	49.3	0.00000179	Chaperonin	N/A
eggNOG-mapper	UHGV-0000683_23	1200557.JHWV01000022_gene2459	52.0	0.0000000318	N/A	N/A
structural_annotation	UHGV-0000683_23	PF02699,MF_00369,TIGR00739,COG1862	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_24	phrog_581	212.7	0	minor head protein	head and packaging
UniRef90	UHGV-0000683_24	UniRef90_R6YG84	697.0	0	CdiA_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0000683_24	693746.OBV_18050	120.0	1.64e-26	Phage minor capsid protein 2	N/A
Pfam	UHGV-0000683_24	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
Pfam	UHGV-0000683_24	PF21814	N/A	N/A	N/A	DUF6883
COG	UHGV-0000683_24	COG2369	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000683_24	PF06152,PF21814	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_25	phrog_533	354.4	0	portal protein	head and packaging
UniRef90	UHGV-0000683_25	UniRef90_R6Y8H1	831.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-0000683_25	545697.HMPREF0216_02845	403.0	0	N/A	N/A
Pfam	UHGV-0000683_25	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
structural_annotation	UHGV-0000683_25	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
KOfam	UHGV-0000683_26	K06909	330.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0000683_26	phrog_5653	137.9	6.89999e-41	terminase large subunit	head and packaging
UniRef90	UHGV-0000683_26	UniRef90_R6XV26	1048.0	0	Phage terminase	N/A
eggNOG-mapper	UHGV-0000683_26	411461.DORFOR_01162	446.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-0000683_26	PF13518	N/A	N/A	Helix-turn-helix domain	HTH_28
Pfam	UHGV-0000683_26	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0000683_26	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
COG	UHGV-0000683_26	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0000683_26	PF04466,PF17288,PF03592,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_28	phrog_1233	47.0	0.00000000000042	N/A	unknown function
structural_annotation	UHGV-0000683_28	PF13058	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_30	phrog_36	58.7	1.2e-16	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-0000683_30	1121871.AUAT01000030_gene1019	52.0	0.0000022	N/A	N/A
COG	UHGV-0000683_30	COG1191	N/A	N/A	DNA-directed RNA polymerase specialized sigma subunit	N/A
structural_annotation	UHGV-0000683_30	PF07374,NF008895	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000683_34	PF20027	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000683_38	PF20763	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000683_39	PF09871,TIGR00739	N/A	N/A	N/A	N/A
KOfam	UHGV-0000683_42	K01160	43.2	0.000000000011	rusA; crossover junction endodeoxyribonuclease RusA [EC:3.1.21.10]	N/A
PHROG	UHGV-0000683_42	phrog_34	50.8	0.000000000000036	RusA-like Holliday junction resolvase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000683_42	UniRef90_A0A151B7Z2	122.0	2.06e-33	Endodeoxyribonuclease RusA	N/A
eggNOG-mapper	UHGV-0000683_42	525919.Apre_0813	107.0	2.07e-28	Endodeoxyribonuclease RusA	N/A
COG	UHGV-0000683_42	COG4570	N/A	N/A	Holliday junction resolvase RusA (prophage-encoded endonuclease)	N/A
structural_annotation	UHGV-0000683_42	PF05866,NF007305,COG4570	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_43	phrog_4973	50.9	0.000000000000024	N/A	unknown function
UniRef90	UHGV-0000683_43	UniRef90_A0A843HM15	75.5	2.42e-16	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0000683_43	935261.JAGL01000009_gene1175	51.2	0.000000116	Helix-turn-helix domain	N/A
Pfam	UHGV-0000683_43	PF14090	N/A	N/A	Helix-turn-helix domain	HTH_39
structural_annotation	UHGV-0000683_43	PF14090,NF008549,COG4738	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_45	phrog_2289	48.9	0.00000000000012	helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000683_45	UniRef90_A0A315ZV02	54.7	0.000000149	Loader and inhibitor of G40P protein	N/A
structural_annotation	UHGV-0000683_45	PF11417	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_46	phrog_8489	248.8	0	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000683_46	UniRef90_UPI001D0B3316	227.0	0	replisome organizer	N/A
eggNOG-mapper	UHGV-0000683_46	1139219.I569_00860	199.0	0	DnaD domain protein	N/A
COG	UHGV-0000683_46	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
structural_annotation	UHGV-0000683_46	PF09681,TIGR01714	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_49	phrog_72	59.5	2e-17	NinB/ Orf homologous recombination mediator	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000683_49	UniRef90_A0A8D9PDS2	100.0	1.38e-23	NinB protein	N/A
eggNOG-mapper	UHGV-0000683_49	445972.ANACOL_01825	90.9	1.59e-20	N/A	N/A
structural_annotation	UHGV-0000683_49	PF05772	N/A	N/A	N/A	N/A
KOfam	UHGV-0000683_50	K03111	135.3	7e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0000683_50	phrog_44	136.7	1.50001e-40	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000683_50	UniRef90_R5Z2P9	184.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0000683_50	1291050.JAGE01000001_gene1719	162.0	0	Plays an important role in DNA replication, recombination and repair. Binds to ssDNA and to an array of partner proteins to recruit them to their sites of action during DNA metabolism	N/A
Pfam	UHGV-0000683_50	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0000683_50	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0000683_50	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0000683_50	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0000683_50	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_51	phrog_124	98.0	1.1e-28	Sak4-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0000683_51	UniRef90_A0A7X7HFU7	294.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0000683_51	1329516.JPST01000033_gene2854	79.7	0.0000000000000117	Can catalyze the hydrolysis of ATP in the presence of single-stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage	N/A
Pfam	UHGV-0000683_51	PF13479	N/A	N/A	AAA domain	AAA_24
COG	UHGV-0000683_51	COG0468	N/A	N/A	RecA/RadA recombinase	N/A
structural_annotation	UHGV-0000683_51	PF13479,MF_00348,TIGR01618,COG0468	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0000683_57	PF09035,NF040990,COG3311	N/A	N/A	N/A	N/A
UniRef90	UHGV-0000683_58	UniRef90_A0A3D1PJT4	117.0	5.15e-33	HTH cro/C1-type domain-containing protein	N/A
Pfam	UHGV-0000683_58	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000683_58	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
structural_annotation	UHGV-0000683_58	PF01381,NF041951,COG1476	N/A	N/A	N/A	N/A
KOfam	UHGV-0000683_59	K22300	54.8	0.0000000000000015	dicA; HTH-type transcriptional regulator, cell division transcriptional repressor	N/A
PHROG	UHGV-0000683_59	phrog_8	73.2	5.1e-21	transcriptional regulator	transcription regulation
UniRef90	UHGV-0000683_59	UniRef90_A0A3D1PLJ6	122.0	9.68e-34	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0000683_59	1391647.AVSV01000039_gene1077	65.1	0.0000000000057	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-0000683_59	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0000683_59	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-0000683_59	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_60	phrog_9605	308.2	0	N/A	unknown function
UniRef90	UHGV-0000683_60	UniRef90_R6MZH4	346.0	0	N/A	N/A
eggNOG-mapper	UHGV-0000683_60	1122216.AUHW01000007_gene1474	244.0	0	N/A	N/A
Pfam	UHGV-0000683_60	PF12358	N/A	N/A	N/A	DUF3644
Pfam	UHGV-0000683_60	PF18740	N/A	N/A	EC042_2821-like Restriction Endonuclease-like domain	EC042_2821
structural_annotation	UHGV-0000683_60	PF12358,COG1895	N/A	N/A	N/A	N/A
PHROG	UHGV-0000683_61	phrog_87	58.7	8.8e-17	metallo-protease	other
UniRef90	UHGV-0000683_61	UniRef90_R5PN39	147.0	3.11088e-43	N/A	N/A
eggNOG-mapper	UHGV-0000683_61	515635.Dtur_1293	65.5	0.0000000000124	Zn peptidase	N/A
COG	UHGV-0000683_61	COG2856	N/A	N/A	Zn-dependent peptidase ImmA, M78 family	N/A
structural_annotation	UHGV-0000683_61	PF06114,COG2856	N/A	N/A	N/A	N/A
KOfam	UHGV-0000683_62	K14059	205.4	0	int; integrase	N/A
PHROG	UHGV-0000683_62	phrog_1	181.1	0	integrase	integration and excision
UniRef90	UHGV-0000683_62	UniRef90_UPI0015C5C81A	205.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0000683_62	1235799.C818_03513	132.0	6.56e-33	Phage integrase, N-terminal SAM-like domain	N/A
Pfam	UHGV-0000683_62	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0000683_62	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0000683_62	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0000683_62	PF00589,PF14659,MF_02055,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0000683	Yes	37,307	28	98	1