vOTU vOTU-072811

vOTU: vOTU-072811

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072811
Number of genomes	2
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp000432375
Taxonomy (UHGV)	vFAM-00098 → vSUBFAM-00525 → vGENUS-01773 → vSUBGEN-01038 → vOTU-072811
Host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lutetiensis
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-2091828
Biosample ID	SAMN05971725
Genome length (bp)	22,992 bps
CheckV completeness	99.49% (High-quality)
CDS count	30
CDS density	91.77%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes → Bacilli → Lactobacillales → Streptococcaceae → Streptococcus → Streptococcus lutetiensis	Total connections	5	Host agreement	80
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → CAG-103 → CAG-103 sp000432375	Total connections	4	Host agreement	75

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.49)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-2091828_2	phrog_372	249.6	0	tail protein	tail
UniRef90	UHGV-2091828_2	UniRef90_UPI001373A0FD	220.0	0	N/A	N/A
eggNOG-mapper	UHGV-2091828_2	35344.A0A097PAT0_BPT12	178.0	1.4013e-45	N-acetylmuramoyl-L-alanine amidase activity	N/A
Pfam	UHGV-2091828_2	PF05895	N/A	N/A	N/A	DUF859
structural_annotation	UHGV-2091828_2	PF05895,MF_04116,NF010681,COG3291	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_3	phrog_15074	61.4	1.5e-29	N/A	unknown function
eggNOG-mapper	UHGV-2091828_3	411901.BACCAC_01130	131.0	1.91e-28	COG3209 Rhs family protein	N/A
Pfam	UHGV-2091828_3	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
COG	UHGV-2091828_3	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-2091828_4	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
KOfam	UHGV-2091828_5	K08757	46.7	0.00000000000012	APOA1; apolipoprotein A-I	N/A
PHROG	UHGV-2091828_5	phrog_3981	266.3	0	tail length tape measure protein	tail
UniRef90	UHGV-2091828_5	UniRef90_UPI001F18B975	290.0	0	phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-2091828_5	536233.CLO_1577	287.0	0	tape measure	N/A
COG	UHGV-2091828_5	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-2091828_5	MF_04138	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_6	phrog_2066	82.6	4e-24	N/A	unknown function
eggNOG-mapper	UHGV-2091828_6	1499683.CCFF01000017_gene2924	73.9	0.0000000000000022	N/A	N/A
UniRef90	UHGV-2091828_7	UniRef90_A0A0P0NA82	70.9	0.00000000000017	N/A	N/A
eggNOG-mapper	UHGV-2091828_7	1123304.AQYA01000037_gene231	87.8	6.97e-21	N/A	N/A
Pfam	UHGV-2091828_7	PF19591	N/A	N/A	N/A	DUF6096
structural_annotation	UHGV-2091828_7	PF19591,TIGR01674	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_8	phrog_158	50.3	0.000000000000049	major tail protein	tail
UniRef90	UHGV-2091828_8	UniRef90_UPI00177C0BE7	90.1	1.55e-20	phage tail protein	N/A
eggNOG-mapper	UHGV-2091828_8	1158607.UAU_01767	92.0	6.64e-22	Phage tail tube protein, TTP	N/A
Pfam	UHGV-2091828_8	PF08813	N/A	N/A	Phage tail tube protein, TTP	Phage_tail_3
structural_annotation	UHGV-2091828_8	PF16463,TIGR02241,COG5437	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2091828_9	1329516.JPST01000016_gene402	50.4	0.00000269	N/A	N/A
structural_annotation	UHGV-2091828_9	PF09646,COG3167	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_10	phrog_5	96.1	4.4e-28	tail completion or Neck1 protein	connector
UniRef90	UHGV-2091828_10	UniRef90_A0A136Q8F4	112.0	6.48e-29	Phage protein, HK97 gp10 family	N/A
eggNOG-mapper	UHGV-2091828_10	1280689.AUJC01000007_gene3313	106.0	2.01e-27	Bacteriophage HK97-gp10, putative tail-component	N/A
Pfam	UHGV-2091828_10	PF04883	N/A	N/A	Bacteriophage HK97-gp10, putative tail-component	HK97-gp10_like
NCBIFam	UHGV-2091828_10	TIGR01725.1	N/A	N/A	HK97-gp10 family putative phage morphogenesis protein	N/A
structural_annotation	UHGV-2091828_10	PF05069,TIGR01725,COG5005	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2091828_11	1280689.AUJC01000007_gene3314	51.6	0.000000332	N/A	N/A
structural_annotation	UHGV-2091828_11	PF12206,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_12	phrog_132	51.5	0.000000000000017	head-tail adaptor	connector
UniRef90	UHGV-2091828_12	UniRef90_UPI000D717081	67.8	0.000000000000997	phage head-tail connector protein	N/A
eggNOG-mapper	UHGV-2091828_12	1540257.JQMW01000009_gene3373	59.3	0.000000000324	Phage gp6-like head-tail connector protein	N/A
Pfam	UHGV-2091828_12	PF05135	N/A	N/A	Phage gp6-like head-tail connector protein	Phage_connect_1
structural_annotation	UHGV-2091828_12	PF05135,TIGR01560	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_13	phrog_544	65.1	4.3e-19	major head protein	head and packaging
UniRef90	UHGV-2091828_13	UniRef90_A0A6N3FT63	247.0	0	Phage capsid family protein	N/A
eggNOG-mapper	UHGV-2091828_13	642492.Clole_0972	221.0	0	N/A	N/A
structural_annotation	UHGV-2091828_13	PF05065,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_14	phrog_172	92.0	8.8e-27	head scaffolding protein	head and packaging
UniRef90	UHGV-2091828_14	UniRef90_UPI00085C378A	124.0	1.79e-32	N/A	N/A
eggNOG-mapper	UHGV-2091828_14	1504823.CCMM01000008_gene1042	57.0	0.000000186	N/A	N/A
Pfam	UHGV-2091828_14	PF14265	N/A	N/A	N/A	DUF4355
structural_annotation	UHGV-2091828_14	PF14265	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-2091828_15	1514668.JOOA01000001_gene690	97.4	1.6e-25	N/A	N/A
PHROG	UHGV-2091828_16	phrog_115	166.2	0	minor head protein	head and packaging
UniRef90	UHGV-2091828_16	UniRef90_UPI0001C4EC79	119.0	1.37e-27	minor capsid protein	N/A
eggNOG-mapper	UHGV-2091828_16	1514668.JOOA01000001_gene691	147.0	1.2e-40	Type VI secretion system effector, Hcp	N/A
Pfam	UHGV-2091828_16	PF04233	N/A	N/A	Phage Mu protein F like protein	Phage_Mu_F
NCBIFam	UHGV-2091828_16	TIGR01641.1	N/A	N/A	minor capsid protein	N/A
COG	UHGV-2091828_16	COG3157	N/A	N/A	Type VI protein secretion system component Hcp (secreted cytotoxin)	N/A
structural_annotation	UHGV-2091828_16	PF03496,PF04233,MF_04142,NF041404,TIGR01641,COG2369	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_17	phrog_64	366.8	0	portal protein	head and packaging
UniRef90	UHGV-2091828_17	UniRef90_A0A843HXP9	405.0	0	Phage portal protein	N/A
eggNOG-mapper	UHGV-2091828_17	552398.HMPREF0866_03118	207.0	0	Phage portal protein, SPP1 Gp6-like	N/A
Pfam	UHGV-2091828_17	PF05133	N/A	N/A	Phage portal protein, SPP1 Gp6-like	Phage_prot_Gp6
NCBIFam	UHGV-2091828_17	TIGR01538.1	N/A	N/A	phage portal protein	N/A
structural_annotation	UHGV-2091828_17	PF05133,MF_04120,TIGR01538,COG3567	N/A	N/A	N/A	N/A
structural_annotation	UHGV-2091828_22	PF21226,TIGR04183,COG2372	N/A	N/A	N/A	N/A
KOfam	UHGV-2091828_23	K06909	315.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-2091828_23	phrog_3717	180.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-2091828_23	UniRef90_UPI0018AA0488	445.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-2091828_23	702450.CUW_0531	375.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-2091828_23	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-2091828_23	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-2091828_23	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-2091828_23	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-2091828_23	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_24	phrog_2538	42.4	0.000000000012	terminase small subunit	head and packaging
Pfam	UHGV-2091828_24	PF13022	N/A	N/A	Helix-turn-helix of insertion element transposase	HTH_Tnp_1_2
structural_annotation	UHGV-2091828_24	PF13022	N/A	N/A	N/A	N/A
PHROG	UHGV-2091828_27	phrog_15768	55.2	0.0000000000000018	N/A	unknown function
Pfam	UHGV-2091828_27	PF19808	N/A	N/A	N/A	DUF6291
Pfam	UHGV-2091828_27	PF00196	N/A	N/A	Bacterial regulatory proteins, luxR family	GerE
structural_annotation	UHGV-2091828_28	PF18903	N/A	N/A	N/A	N/A
KOfam	UHGV-2091828_30	K04763	152.3	4.2039e-45	xerD; integrase/recombinase XerD	N/A
PHROG	UHGV-2091828_30	phrog_1	146.4	2.60642e-43	integrase	integration and excision
UniRef90	UHGV-2091828_30	UniRef90_UPI001AB048AE	328.0	0	tyrosine-type recombinase/integrase	N/A
eggNOG-mapper	UHGV-2091828_30	1378168.N510_01454	337.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-2091828_30	PF02899	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_1
Pfam	UHGV-2091828_30	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-2091828_30	COG4974	N/A	N/A	Site-specific recombinase XerD	N/A
structural_annotation	UHGV-2091828_30	PF00589,PF13495,MF_01808,TIGR02224,COG4973	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-2091828	Yes	22,992	40	99	1
UHGV-2089156	No	18,700	42	81	1