vOTU vOTU-072851

vOTU: vOTU-072851

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072851
Number of genomes	1
Taxonomy (ICTV)
Taxonomy (UHGV)	vFAM-00090 → vSUBFAM-00789 → vGENUS-06349 → vSUBGEN-04329 → vOTU-072851
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Limivicinus → MGYG000000746
Host range breadth	Species
Lifestyle	temperate (Evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1871203
Biosample ID	N/A
Genome length (bp)	16,213 bps
CheckV completeness	99.90% (High-quality)
CDS count	26
CDS density	82.77%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → Limivicinus → MGYG000000746	Total connections	8	Host agreement	100
PHIST-predicted host lineage		Total connections		Host agreement

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
UniRef90	UHGV-1871203_2	UniRef90_A0A3F3K1J1	103.0	4.62e-27	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1871203_2	394503.Ccel_3173	90.9	5.78e-23	N/A	N/A
Pfam	UHGV-1871203_2	PF13443	N/A	N/A	Cro/C1-type HTH DNA-binding domain	HTH_26
eggNOG-mapper	UHGV-1871203_3	877420.ATVW01000018_gene1667	70.1	0.00000000005	N/A	N/A
PHROG	UHGV-1871203_4	phrog_706	122.7	3e-36	N/A	unknown function
UniRef90	UHGV-1871203_4	UniRef90_A0A2U1BEN4	196.0	0	Bacteriophage Gp15 protein	N/A
eggNOG-mapper	UHGV-1871203_4	693746.OBV_18170	171.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-1871203_4	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1871203_4	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1871203_5	phrog_11299	71.1	1.9e-20	N/A	unknown function
eggNOG-mapper	UHGV-1871203_5	1235797.C816_04185	80.1	3.3e-17	N/A	N/A
structural_annotation	UHGV-1871203_5	PF10666	N/A	N/A	N/A	N/A
PHROG	UHGV-1871203_6	phrog_1535	86.2	1.5e-32	tail length tape measure protein	tail
eggNOG-mapper	UHGV-1871203_6	573061.Clocel_0792	73.9	0.000000000132	tail tape measure protein	N/A
COG	UHGV-1871203_6	COG1280	N/A	N/A	Threonine/homoserine/homoserine lactone efflux protein	N/A
structural_annotation	UHGV-1871203_6	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-1871203_7	phrog_36	52.0	0.000000000000013	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1871203_7	580331.Thit_1400	55.5	0.000000121	N/A	N/A
structural_annotation	UHGV-1871203_7	PF07374,TIGR01636	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1871203_8	1297617.JPJD01000059_gene2640	120.0	5.93e-33	N/A	N/A
NCBIFam	UHGV-1871203_8	TIGR01636.1	N/A	N/A	phage transcriptional regulator, RinA family	N/A
structural_annotation	UHGV-1871203_8	PF06530,TIGR01636	N/A	N/A	N/A	N/A
KOfam	UHGV-1871203_10	K06909	331.0	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1871203_10	phrog_3717	159.6	0	terminase large subunit	head and packaging
UniRef90	UHGV-1871203_10	UniRef90_R9JJE2	478.0	0	PBSX family phage terminase, large subunit	N/A
eggNOG-mapper	UHGV-1871203_10	397291.C804_01612	478.0	0	Phage terminase large subunit	N/A
Pfam	UHGV-1871203_10	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-1871203_10	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-1871203_10	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-1871203_10	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1871203_10	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1871203_11	1211814.CAPG01000097_gene4376	61.2	0.000000000165	N/A	N/A
structural_annotation	UHGV-1871203_11	NF041728	N/A	N/A	N/A	N/A
Pfam	UHGV-1871203_17	PF19808	N/A	N/A	N/A	DUF6291
UniRef90	UHGV-1871203_18	UniRef90_UPI001F3CD799	59.7	0.000000000752	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1871203_18	1235797.C816_00778	57.4	0.00000000112	TIGRFAM DNA binding domain, excisionase family	N/A
NCBIFam	UHGV-1871203_18	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
KOfam	UHGV-1871203_19	K14059	265.5	0	int; integrase	N/A
PHROG	UHGV-1871203_19	phrog_1	215.9	0	integrase	integration and excision
UniRef90	UHGV-1871203_19	UniRef90_UPI001898152E	370.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-1871203_19	877411.JMMA01000002_gene2540	270.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-1871203_19	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-1871203_19	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-1871203_19	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-1871203_19	PF00589,PF13102,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A
PHROG	UHGV-1871203_24	phrog_2657	69.1	2.5e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1871203_24	UniRef90_UPI0009305F59	186.0	0	Rha family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1871203_24	180332.JTGN01000007_gene3610	173.0	0	PFAM Phage regulatory protein Rha (Phage_pRha)	N/A
Pfam	UHGV-1871203_24	PF09669	N/A	N/A	Phage regulatory protein Rha (Phage_pRha)	Phage_pRha
COG	UHGV-1871203_24	COG3646	N/A	N/A	Phage regulatory protein Rha	N/A
structural_annotation	UHGV-1871203_24	PF09669,TIGR02681,COG3646	N/A	N/A	N/A	N/A
UniRef90	UHGV-1871203_25	UniRef90_UPI000F0512BB	90.1	1.03e-22	CopG family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1871203_25	478749.BRYFOR_07643	73.2	9.42e-17	N/A	N/A
structural_annotation	UHGV-1871203_25	PF12651,NF041793,COG4710	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1871203	Yes	16,213	50	100	1