vOTU vOTU-072976

vOTU: vOTU-072976

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-072976
Number of genomes	3
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00003 → vSUBFAM-00117 → vGENUS-00572 → vSUBGEN-18002 → vOTU-072976
Host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira
Host range breadth	Genus
Lifestyle	lytic (evidence: BACPHLIP)

Representative genome
Genome ID	UHGV-1533425
Biosample ID	N/A
Genome length (bp)	35,400 bps
CheckV completeness	93.46% (High-quality)
CDS count	55
CDS density	93.99%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira	Total connections	748	Host agreement	99.2
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Lachnospirales → Lachnospiraceae → Lachnospira → Lachnospira sp000436475	Total connections	131	Host agreement	92.37

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 93.46)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
PHROG	UHGV-1533425_1	phrog_1847	343.3	0	N/A	unknown function
UniRef90	UHGV-1533425_1	UniRef90_A0A174S171	673.0	0	Membrane-bound metallopeptidase	N/A
eggNOG-mapper	UHGV-1533425_1	483218.BACPEC_01182	590.0	0	T5orf172	N/A
Pfam	UHGV-1533425_1	PF13455	N/A	N/A	Meiotically up-regulated gene 113	MUG113
COG	UHGV-1533425_1	COG1196	N/A	N/A	Chromosome segregation ATPase Smc	N/A
structural_annotation	UHGV-1533425_1	PF13250,NF041454	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_2	phrog_3845	68.7	1.2e-19	N/A	unknown function
UniRef90	UHGV-1533425_2	UniRef90_UPI0019563C69	86.7	2.01e-16	PH domain-containing protein	N/A
eggNOG-mapper	UHGV-1533425_2	768710.DesyoDRAFT_5205	110.0	1.69e-27	PFAM Tellurite resistance protein TerB	N/A
COG	UHGV-1533425_2	COG3793	N/A	N/A	Tellurite resistance protein TerB	N/A
PHROG	UHGV-1533425_3	phrog_20886	51.0	0.000000000000017	N/A	unknown function
eggNOG-mapper	UHGV-1533425_3	476272.RUMHYD_02825	57.8	0.00000000152	N/A	N/A
structural_annotation	UHGV-1533425_3	PF06114	N/A	N/A	N/A	N/A
KOfam	UHGV-1533425_4	K22299	58.7	1.5e-16	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-1533425_4	phrog_8	70.5	3.5e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-1533425_4	UniRef90_A0A413YU20	232.0	0	Helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-1533425_4	553973.CLOHYLEM_07297	87.8	8.91e-21	Transcriptional	N/A
PADLOC	UHGV-1533425_4	retron_type_VI_hth_cluster2_1	53.2	0.0000000000000053	N/A	Retron
Pfam	UHGV-1533425_4	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-1533425_4	COG1476	N/A	N/A	DNA-binding transcriptional regulator, XRE-family HTH domain	N/A
structural_annotation	UHGV-1533425_4	PF01381,MF_00535,NF041951,COG1476	N/A	N/A	N/A	N/A
UniRef90	UHGV-1533425_5	UniRef90_A0A356C6B4	125.0	9.2e-36	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-1533425_5	706433.HMPREF9430_01294	85.9	7.33e-21	Helix-turn-helix XRE-family like proteins	N/A
Pfam	UHGV-1533425_5	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
PHROG	UHGV-1533425_10	phrog_478	127.1	7.2e-38	site-specific recombination directionality factor RDF	integration and excision
UniRef90	UHGV-1533425_10	UniRef90_A0A373Q857	176.0	0	YopX domain-containing protein	N/A
eggNOG-mapper	UHGV-1533425_10	478749.BRYFOR_08526	101.0	8.61e-26	N/A	N/A
PHROG	UHGV-1533425_11	phrog_20040	40.7	0.000000000027	N/A	unknown function
eggNOG-mapper	UHGV-1533425_11	1538644.KO02_12130	104.0	1.22e-28	N/A	N/A
PHROG	UHGV-1533425_15	phrog_3584	157.2	0	replication initiation protein	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1533425_15	642492.Clole_0725	145.0	5.70001e-40	N/A	N/A
structural_annotation	UHGV-1533425_15	PF21578	N/A	N/A	N/A	N/A
KOfam	UHGV-1533425_16	K03469	69.0	1e-19	rnhA, RNASEH1; ribonuclease HI [EC:3.1.26.4]	N/A
PHROG	UHGV-1533425_16	phrog_531	61.2	2.1e-17	Rnase H	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1533425_16	UniRef90_A0A3B8UHR5	316.0	0	RNase H type-1 domain-containing protein	N/A
eggNOG-mapper	UHGV-1533425_16	941824.TCEL_01720	77.4	6.58e-16	Endonuclease that specifically degrades the RNA of RNA- DNA hybrids	N/A
Pfam	UHGV-1533425_16	PF00075	N/A	N/A	RNase H	RNase_H
COG	UHGV-1533425_16	COG0328	N/A	N/A	Ribonuclease HI	N/A
structural_annotation	UHGV-1533425_16	PF00075,MF_00042,NF001236,COG0328	N/A	N/A	N/A	N/A
structural_annotation	UHGV-1533425_17	PF02179,NF011863	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_18	phrog_7566	96.0	2.2e-28	N/A	unknown function
eggNOG-mapper	UHGV-1533425_18	508419.F8J187_9CAUD	73.6	0.00000000000000102	N/A	N/A
PHROG	UHGV-1533425_19	phrog_17690	110.1	1.2e-32	N/A	unknown function
eggNOG-mapper	UHGV-1533425_19	33035.JPJF01000123_gene2433	97.1	3.7e-24	N/A	N/A
PHROG	UHGV-1533425_20	phrog_2044	110.1	8.1e-33	RNA polymerase beta subunit	DNA, RNA and nucleotide metabolism
eggNOG-mapper	UHGV-1533425_20	1449126.JQKL01000051_gene3179	77.4	8.8e-18	N/A	N/A
structural_annotation	UHGV-1533425_20	MF_00337,NF010671,COG1722	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_21	phrog_1891	186.4	0	HNH endonuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1533425_21	UniRef90_A0A3D5LV28	547.0	0	HNHc domain-containing protein	N/A
eggNOG-mapper	UHGV-1533425_21	1282664.H354_06526	148.0	1.18001e-40	HNH endonuclease	N/A
Pfam	UHGV-1533425_21	PF13392	N/A	N/A	HNH endonuclease	HNH_3
structural_annotation	UHGV-1533425_21	PF13392	N/A	N/A	N/A	N/A
eggNOG-mapper	UHGV-1533425_23	478749.BRYFOR_07594	54.7	0.000000416	N/A	N/A
PHROG	UHGV-1533425_29	phrog_36	60.4	3.9e-17	transcriptional regulator	transcription regulation
eggNOG-mapper	UHGV-1533425_29	397290.C810_01391	103.0	2.18e-26	N/A	N/A
structural_annotation	UHGV-1533425_29	PF02996	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1533425_30	cluster_211731	152.0	2.8026e-45	NA	N/A
Pfam	UHGV-1533425_30	PF20505	N/A	N/A	N/A	DUF6731
structural_annotation	UHGV-1533425_30	PF20505	N/A	N/A	N/A	N/A
AcrCatalog	UHGV-1533425_31	cluster_138565	103.0	7.14e-30	NA	N/A
structural_annotation	UHGV-1533425_31	PF15968	N/A	N/A	N/A	N/A
KOfam	UHGV-1533425_32	K07474	166.2	0	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-1533425_32	phrog_51	167.4	0	terminase small subunit	head and packaging
UniRef90	UHGV-1533425_32	UniRef90_A0A356C6K0	329.0	0	Terminase small subunit	N/A
eggNOG-mapper	UHGV-1533425_32	1499683.CCFF01000014_gene3916	159.0	0	Terminase small subunit	N/A
Pfam	UHGV-1533425_32	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-1533425_32	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-1533425_32	PF03592,COG3728	N/A	N/A	N/A	N/A
KOfam	UHGV-1533425_33	K06909	103.9	1.9e-30	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-1533425_33	phrog_2	75.0	1.5e-21	terminase large subunit	head and packaging
UniRef90	UHGV-1533425_33	UniRef90_A0A413YU24	925.0	0	Terminase	N/A
eggNOG-mapper	UHGV-1533425_33	1391647.AVSV01000003_gene1802	522.0	0	Phage terminase, large subunit, PBSX family	N/A
Pfam	UHGV-1533425_33	PF03237	N/A	N/A	Terminase large subunit, T4likevirus-type, N-terminal	Terminase_6N
COG	UHGV-1533425_33	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-1533425_33	PF03237,PF17289,MF_04148,TIGR01547,COG1783	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_34	phrog_533	276.6	0	portal protein	head and packaging
UniRef90	UHGV-1533425_34	UniRef90_A0A3D5LTG9	962.0	0	Capsid protein	N/A
eggNOG-mapper	UHGV-1533425_34	33035.JPJF01000093_gene2257	569.0	0	N/A	N/A
structural_annotation	UHGV-1533425_34	PF05133,MF_04120,TIGR01542,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_35	phrog_581	245.7	0	minor head protein	head and packaging
UniRef90	UHGV-1533425_35	UniRef90_A0A3D5LQU4	628.0	0	Minor capsid protein	N/A
eggNOG-mapper	UHGV-1533425_35	33035.JPJF01000093_gene2255	444.0	0	N/A	N/A
Pfam	UHGV-1533425_35	PF06152	N/A	N/A	Phage minor capsid protein 2	Phage_min_cap2
COG	UHGV-1533425_35	COG5585	N/A	N/A	Putative phage head morphogenesis protein, F of phage Mu or gp7 of SPP1	N/A
structural_annotation	UHGV-1533425_35	PF06152	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_37	phrog_355	63.9	2.5e-18	nucleoside 2-deoxyribosyltransferase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-1533425_37	UniRef90_A0A415G5B2	145.0	2.18603e-43	N/A	N/A
eggNOG-mapper	UHGV-1533425_37	1256908.HMPREF0373_00479	144.0	1.4013e-43	N/A	N/A
Pfam	UHGV-1533425_37	PF14359	N/A	N/A	N/A	DUF4406
structural_annotation	UHGV-1533425_37	PF14359	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_38	phrog_2303	141.4	6.30024e-42	head scaffolding protein	head and packaging
eggNOG-mapper	UHGV-1533425_38	483218.BACPEC_01156	143.0	1.33e-39	N/A	N/A
PHROG	UHGV-1533425_39	phrog_422	260.5	0	major head protein	head and packaging
UniRef90	UHGV-1533425_39	UniRef90_A0A3D5M0U8	505.0	0	Phage capsid protein	N/A
eggNOG-mapper	UHGV-1533425_39	663278.Ethha_1589	375.0	0	N/A	N/A
structural_annotation	UHGV-1533425_39	PF19821,MF_04119,TIGR04387,COG4653	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_40	phrog_541	64.9	1.3e-18	head-tail adaptor	connector
eggNOG-mapper	UHGV-1533425_40	1304866.K413DRAFT_0783	144.0	9.48679e-43	N/A	N/A
PHROG	UHGV-1533425_41	phrog_8710	130.2	6.9e-39	N/A	unknown function
eggNOG-mapper	UHGV-1533425_41	742740.HMPREF9474_03508	121.0	2.34e-34	N/A	N/A
structural_annotation	UHGV-1533425_41	PF10665,TIGR01563,COG5614	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_42	phrog_556	57.3	2.3e-16	minor head protein	head and packaging
eggNOG-mapper	UHGV-1533425_42	483218.BACPEC_01151	139.0	7.36999e-41	N/A	N/A
PHROG	UHGV-1533425_43	phrog_2595	101.9	4.9e-30	head-tail connector protein	connector
UniRef90	UHGV-1533425_43	UniRef90_UPI001D068DAC	148.0	1.97583e-43	minor capsid protein	N/A
eggNOG-mapper	UHGV-1533425_43	742740.HMPREF9474_03510	130.0	4.55e-37	N/A	N/A
Pfam	UHGV-1533425_43	PF12691	N/A	N/A	Bacteriophage minor capsid protein	Minor_capsid_3
structural_annotation	UHGV-1533425_43	PF12691,COG5003	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_44	phrog_820	108.4	4.5e-32	major tail protein	tail
UniRef90	UHGV-1533425_44	UniRef90_T3DDR1	186.0	0	Phage major tail 2 family protein	N/A
eggNOG-mapper	UHGV-1533425_44	1151292.QEW_2426	186.0	0	N/A	N/A
structural_annotation	UHGV-1533425_44	PF06199,TIGR02126,COG5437	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_45	phrog_8300	69.8	3.1e-20	N/A	unknown function
eggNOG-mapper	UHGV-1533425_45	1151292.QEW_2425	70.1	0.0000000000000419	N/A	N/A
structural_annotation	UHGV-1533425_45	PF06896	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_46	phrog_8355	100.9	4.3e-30	N/A	unknown function
UniRef90	UHGV-1533425_46	UniRef90_UPI0006BBA9AA	132.0	1e-37	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-1533425_46	1415775.U729_2613	110.0	4.87e-30	N/A	N/A
Pfam	UHGV-1533425_46	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-1533425_46	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_47	phrog_1535	281.6	0	tail length tape measure protein	tail
UniRef90	UHGV-1533425_47	UniRef90_A0A1C5PIN9	486.0	0	Phage-related protein	N/A
eggNOG-mapper	UHGV-1533425_47	33035.JPJF01000093_gene2243	372.0	0	phage tail tape measure protein	N/A
COG	UHGV-1533425_47	COG3941	N/A	N/A	Phage tail tape-measure protein, controls tail length	N/A
structural_annotation	UHGV-1533425_47	PF20155,TIGR01760,COG3941	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_48	phrog_1194	76.7	2.7e-22	N/A	unknown function
eggNOG-mapper	UHGV-1533425_48	33035.JPJF01000093_gene2242	155.0	0	N/A	N/A
structural_annotation	UHGV-1533425_48	PF20458,TIGR02126,COG3499	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_50	phrog_6616	166.3	0	tail protein	tail
UniRef90	UHGV-1533425_50	UniRef90_A0A1C5VLA0	238.0	0	Collagen triple helix repeat (20 copies)	N/A
eggNOG-mapper	UHGV-1533425_50	1294142.CINTURNW_1706	162.0	8.21e-38	Phage minor structural protein	N/A
COG	UHGV-1533425_50	COG4926	N/A	N/A	Phage-related protein	N/A
structural_annotation	UHGV-1533425_50	PF14594,PF00629,NF033848,NF033675,COG3500	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_51	phrog_38044	68.2	1.4013e-44	N/A	unknown function
eggNOG-mapper	UHGV-1533425_51	428127.EUBDOL_01565	130.0	4.43e-28	cellulase activity	N/A
COG	UHGV-1533425_51	COG4733	N/A	N/A	Phage-related protein, tail protein J	N/A
PHROG	UHGV-1533425_53	phrog_1401	57.9	1.8e-16	N/A	unknown function
UniRef90	UHGV-1533425_53	UniRef90_A0A7C6P910	67.4	0.00000000000924	N/A	N/A
eggNOG-mapper	UHGV-1533425_53	1294142.CINTURNW_1041	65.1	0.0000000000136	N/A	N/A
structural_annotation	UHGV-1533425_53	PF07761	N/A	N/A	N/A	N/A
PHROG	UHGV-1533425_54	phrog_199	59.8	3.7e-17	holin	lysis
UniRef90	UHGV-1533425_54	UniRef90_A0A3D5LSL4	265.0	0	Holin	N/A
eggNOG-mapper	UHGV-1533425_54	411470.RUMGNA_02086	188.0	0	N/A	N/A
Pfam	UHGV-1533425_54	PF05105	N/A	N/A	Bacteriophage holin family	Phage_holin_4_1
NCBIFam	UHGV-1533425_54	TIGR01593.1	N/A	N/A	toxin secretion/phage lysis holin	N/A
COG	UHGV-1533425_54	COG4824	N/A	N/A	Phage-related holin (Lysis protein)	N/A
structural_annotation	UHGV-1533425_54	PF05105,TIGR01593,COG4824	N/A	N/A	N/A	N/A
KOfam	UHGV-1533425_55	K07273	87.1	2.6e-25	acm; lysozyme	N/A
PHROG	UHGV-1533425_55	phrog_291	78.9	8.6e-23	endolysin	lysis
UniRef90	UHGV-1533425_55	UniRef90_A0A174PB89	706.0	0	Lyzozyme M1 (1,4-beta-N-acetylmuramidase)	N/A
eggNOG-mapper	UHGV-1533425_55	469596.HMPREF9488_01959	120.0	2.5e-28	Glycosyl hydrolase family 25	N/A
Pfam	UHGV-1533425_55	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-1533425_55	COG3757	N/A	N/A	Lyzozyme M1 (1,4-beta-N-acetylmuramidase), GH25 family	N/A
structural_annotation	UHGV-1533425_55	PF01183,PF11623,COG3757,COG2139	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-1533425	Yes	35,400	37	93	1
UHGV-0119351	No	25,995	37	69	1
UHGV-1627148	No	11,408	35	28	1