vOTU vOTU-073006

vOTU: vOTU-073006

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-073006
Number of genomes	1
Taxonomy (ICTV)	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737
Taxonomy (UHGV)	vFAM-00163 → vSUBFAM-02063 → vGENUS-19268 → vSUBGEN-37169 → vOTU-073006
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737 → UBA737 sp900549055
Host range breadth	Species
Lifestyle	temperate (Evidence: geNomad)

Representative genome
Genome ID	UHGV-0141935
Biosample ID	N/A
Genome length (bp)	39,920 bps
CheckV completeness	99.90% (High-quality)
CDS count	54
CDS density	92.57%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	CRISPR
CRISPR-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737 → UBA737 sp900549055	Total connections	33	Host agreement	90.91
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Acutalibacteraceae → UBA737	Total connections	6	Host agreement	100

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
KOfam	UHGV-0141935_1	K07273	74.9	1.5e-21	acm; lysozyme	N/A
PHROG	UHGV-0141935_1	phrog_291	58.4	1.6e-16	endolysin	lysis
UniRef90	UHGV-0141935_1	UniRef90_B0NER8	68.2	0.000000000000498	Lysozyme M1	N/A
eggNOG-mapper	UHGV-0141935_1	1033737.CAEV01000007_gene2554	99.8	1.44e-24	family 25	N/A
Pfam	UHGV-0141935_1	PF01183	N/A	N/A	Glycosyl hydrolases family 25	Glyco_hydro_25
COG	UHGV-0141935_1	COG0860	N/A	N/A	N-acetylmuramoyl-L-alanine amidase	N/A
PHROG	UHGV-0141935_2	phrog_1863	60.1	2.4e-17	N/A	unknown function
eggNOG-mapper	UHGV-0141935_2	665956.HMPREF1032_02709	99.0	2.81e-26	N/A	N/A
KOfam	UHGV-0141935_4	K13884	64.7	8.3e-19	MARCO; macrophage receptor with collagenous structure	N/A
PHROG	UHGV-0141935_4	phrog_5073	77.1	2.6e-22	tail fiber protein	tail
eggNOG-mapper	UHGV-0141935_4	476272.RUMHYD_00002	86.7	0.00000000000000712	N/A	N/A
Pfam	UHGV-0141935_4	PF01391	N/A	N/A	Collagen triple helix repeat (20 copies)	Collagen
PHROG	UHGV-0141935_5	phrog_24267	58.5	1.5e-16	N/A	unknown function
eggNOG-mapper	UHGV-0141935_5	35344.A0A097PAT0_BPT12	74.7	0.0000000000113	N-acetylmuramoyl-L-alanine amidase activity	N/A
structural_annotation	UHGV-0141935_5	PF10651	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_6	K07741	104.7	2.1e-30	antB; anti-repressor protein	N/A
PHROG	UHGV-0141935_6	phrog_130	277.2	0	anti-repressor Ant	transcription regulation
UniRef90	UHGV-0141935_6	UniRef90_A0A4U9RE12	342.0	0	KilA protein, phage-related DNA binding protein	N/A
eggNOG-mapper	UHGV-0141935_6	1391647.AVSV01000003_gene1780	317.0	0	Phage antirepressor protein	N/A
Pfam	UHGV-0141935_6	PF02498	N/A	N/A	BRO family, N-terminal domain	Bro-N
Pfam	UHGV-0141935_6	PF03374	N/A	N/A	Phage antirepressor protein KilAC domain	ANT
COG	UHGV-0141935_6	COG3617	N/A	N/A	Prophage antirepressor	N/A
structural_annotation	UHGV-0141935_6	PF03374,PF02498,TIGR02681,COG3617,COG3645	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_9	K22299	47.7	0.00000000000033	rghR; HTH-type transcriptional regulator, competence development regulator	N/A
PHROG	UHGV-0141935_9	phrog_8	50.8	0.000000000000035	transcriptional regulator	transcription regulation
UniRef90	UHGV-0141935_9	UniRef90_A0A3E2VLU0	92.0	1.46e-19	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0141935_9	526218.Sterm_3926	89.0	1.59e-20	sequence-specific DNA binding	N/A
Pfam	UHGV-0141935_9	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
COG	UHGV-0141935_9	COG1396	N/A	N/A	Transcriptional regulator, contains XRE-family HTH domain	N/A
UniRef90	UHGV-0141935_11	UniRef90_A0A316M336	578.0	0	MuF_C domain-containing protein	N/A
eggNOG-mapper	UHGV-0141935_11	1408437.JNJN01000060_gene452	495.0	0	heme binding	N/A
Pfam	UHGV-0141935_11	PF18819	N/A	N/A	Phage MuF-C-terminal domain	MuF_C
COG	UHGV-0141935_11	COG0503	N/A	N/A	Adenine/guanine phosphoribosyltransferase or related PRPP-binding protein	N/A
structural_annotation	UHGV-0141935_12	PF08703,NF038305	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0141935_13	PF11134,MF_03027,NF010237,TIGR03511,COG2319	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0141935_14	PF11650	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_15	phrog_156	135.8	3.00004e-41	portal protein	head and packaging
eggNOG-mapper	UHGV-0141935_15	1121091.AUMP01000003_gene2583	224.0	0	N/A	N/A
structural_annotation	UHGV-0141935_15	PF16510,MF_04120,TIGR01538,COG5511	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_16	phrog_422	221.7	0	major head protein	head and packaging
UniRef90	UHGV-0141935_16	UniRef90_G4HEI9	180.0	0	Lj928 prophage protein	N/A
eggNOG-mapper	UHGV-0141935_16	743719.PaelaDRAFT_2400	180.0	0	N/A	N/A
structural_annotation	UHGV-0141935_16	PF21703,MF_04119,TIGR04387,COG4834	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_19	K06909	380.9	0	xtmB; phage terminase large subunit	N/A
PHROG	UHGV-0141935_19	phrog_3717	231.9	0	terminase large subunit	head and packaging
UniRef90	UHGV-0141935_19	UniRef90_A0A3D2ABH8	637.0	0	PBSX family phage terminase large subunit	N/A
eggNOG-mapper	UHGV-0141935_19	1033733.CAEK01000007_gene1653	461.0	0	Terminase RNAseH like domain	N/A
Pfam	UHGV-0141935_19	PF04466	N/A	N/A	Phage terminase large subunit	Terminase_3
Pfam	UHGV-0141935_19	PF17288	N/A	N/A	Terminase RNAseH like domain	Terminase_3C
NCBIFam	UHGV-0141935_19	TIGR01547.1	N/A	N/A	PBSX family phage terminase large subunit	N/A
COG	UHGV-0141935_19	COG1783	N/A	N/A	Phage terminase large subunit	N/A
structural_annotation	UHGV-0141935_19	PF04466,PF17288,MF_04145,TIGR01547,COG1783	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_20	K07474	73.0	8.9e-21	xtmA; phage terminase small subunit	N/A
PHROG	UHGV-0141935_20	phrog_51	70.8	2.5e-20	terminase small subunit	head and packaging
UniRef90	UHGV-0141935_20	UniRef90_UPI0009E1A09F	100.0	3.85e-24	terminase small subunit	N/A
eggNOG-mapper	UHGV-0141935_20	693746.OBV_23940	86.3	5.24e-19	DNA packaging	N/A
Pfam	UHGV-0141935_20	PF03592	N/A	N/A	Terminase small subunit	Terminase_2
COG	UHGV-0141935_20	COG3728	N/A	N/A	Phage terminase, small subunit	N/A
structural_annotation	UHGV-0141935_20	PF03592,COG3728	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_21	phrog_36	69.7	5.1e-20	transcriptional regulator	transcription regulation
UniRef90	UHGV-0141935_21	UniRef90_UPI001D05F87A	122.0	3.39e-33	RNA polymerase subunit sigma-24	N/A
eggNOG-mapper	UHGV-0141935_21	1235835.C814_01174	122.0	5.36e-34	N/A	N/A
structural_annotation	UHGV-0141935_21	PF04545	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0141935_27	PF15597	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_28	phrog_3136	119.5	1.2e-35	N/A	unknown function
UniRef90	UHGV-0141935_28	UniRef90_UPI001C02A61B	131.0	1.15e-34	ASCH domain-containing protein	N/A
eggNOG-mapper	UHGV-0141935_28	1007096.BAGW01000031_gene120	59.7	0.000000048	The globular domain of the protein is located near the polypeptide exit tunnel on the outside of the subunit, while an extended beta-hairpin is found that lines the wall of the exit tunnel in the center of the 70S ribosome	N/A
COG	UHGV-0141935_28	COG4933	N/A	N/A	Predicted transcriptional regulator, contains an HTH and PUA-like domains	N/A
structural_annotation	UHGV-0141935_28	PF08819,MF_00684,NF008917,COG4933	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_29	phrog_13321	67.7	2.3e-20	N/A	unknown function
UniRef90	UHGV-0141935_29	UniRef90_UPI00030D2C45	324.0	0	radical SAM protein	N/A
eggNOG-mapper	UHGV-0141935_29	1007096.BAGW01000031_gene122	324.0	0	PFAM Radical SAM	N/A
Pfam	UHGV-0141935_29	PF04055	N/A	N/A	Radical SAM superfamily	Radical_SAM
COG	UHGV-0141935_29	COG1533	N/A	N/A	DNA repair photolyase	N/A
structural_annotation	UHGV-0141935_29	PF20903,MF_00917,NF033668,COG4422	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_32	phrog_8841	456.7	0	DNA primase/helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0141935_32	UniRef90_A0A3E2U7B1	459.0	0	N/A	N/A
eggNOG-mapper	UHGV-0141935_32	658655.HMPREF0988_02581	446.0	0	N/A	N/A
Pfam	UHGV-0141935_32	PF06048	N/A	N/A	N/A	DUF927
Pfam	UHGV-0141935_32	PF18662	N/A	N/A	Cch helix turn helix domain	HTH_56
COG	UHGV-0141935_32	COG5519	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0141935_32	PF06048,PF18662,MF_00016,NF011296,COG5519	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_33	K02316	80.3	3e-23	dnaG; DNA primase [EC:2.7.7.101]	N/A
PHROG	UHGV-0141935_33	phrog_11992	99.6	4.5e-29	N/A	unknown function
UniRef90	UHGV-0141935_33	UniRef90_A0A1H9YJB0	98.6	4.61e-23	CHC2 zinc finger	N/A
eggNOG-mapper	UHGV-0141935_33	397290.C810_05175	78.2	7.13e-16	CHC2 zinc finger	N/A
PADLOC	UHGV-0141935_33	drt-UG29	67.1	1.9e-19	DRT	DRT
Pfam	UHGV-0141935_33	PF01807	N/A	N/A	CHC2 zinc finger	zf-CHC2
COG	UHGV-0141935_33	COG0358	N/A	N/A	DNA primase (bacterial type)	N/A
structural_annotation	UHGV-0141935_33	PF01807,PF00401	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_34	phrog_3490	92.4	2.8e-27	ERCC4-type nuclease	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0141935_34	UniRef90_A0A3D4T734	194.0	0	ERCC4 domain-containing protein	N/A
eggNOG-mapper	UHGV-0141935_34	861454.HMPREF9099_00350	86.3	9.01e-19	ERCC4 domain	N/A
structural_annotation	UHGV-0141935_34	PF02732,NF040956,COG1948	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_35	K03111	135.1	8e-40	ssb; single-strand DNA-binding protein	N/A
PHROG	UHGV-0141935_35	phrog_44	138.5	4.19997e-41	single strand DNA binding protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0141935_35	UniRef90_A0A3D4T9F8	265.0	0	Single-stranded DNA-binding protein	N/A
eggNOG-mapper	UHGV-0141935_35	1507.HMPREF0262_03706	143.0	7.9902e-42	Single-stranded DNA-binding protein	N/A
Pfam	UHGV-0141935_35	PF00436	N/A	N/A	Single-strand binding protein family	SSB
NCBIFam	UHGV-0141935_35	TIGR00621.2	N/A	N/A	single-stranded DNA-binding protein	N/A
COG	UHGV-0141935_35	COG0629	N/A	N/A	Single-stranded DNA-binding protein	N/A
HAMAP	UHGV-0141935_35	MF_00984	N/A	N/A	Single-stranded DNA-binding protein	N/A
structural_annotation	UHGV-0141935_35	PF00436,MF_00984,NF005241,COG0629	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_37	phrog_561	177.3	0	RecT-like ssDNA annealing protein	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0141935_37	UniRef90_UPI001EE8E2AA	254.0	0	recombinase RecT	N/A
eggNOG-mapper	UHGV-0141935_37	887325.HMPREF0381_0098	206.0	0	N/A	N/A
Pfam	UHGV-0141935_37	PF03837	N/A	N/A	RecT family	RecT
structural_annotation	UHGV-0141935_37	PF03837,TIGR01913,COG3723	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0141935_38	PF19157	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_39	K10906	93.0	8.7e-35	recE; exodeoxyribonuclease VIII [EC:3.1.11.-]	N/A
PHROG	UHGV-0141935_39	phrog_412	247.6	0	exonuclease VIII	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0141935_39	UniRef90_A0A3D4T735	442.0	0	N/A	N/A
eggNOG-mapper	UHGV-0141935_39	1454004.AW11_02382	167.0	0	N/A	N/A
Pfam	UHGV-0141935_39	PF12684	N/A	N/A	N/A	DUF3799
COG	UHGV-0141935_39	COG1074	N/A	N/A	3'-5' helicase subunit RecB of the DNA repair enzyme RecBCD (exonuclease V)	N/A
structural_annotation	UHGV-0141935_39	PF12684,MF_03030,TIGR01896,COG2887	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_42	K00558	205.4	0	DNMT1, dcm; DNA (cytosine-5)-methyltransferase 1 [EC:2.1.1.37]	N/A
PHROG	UHGV-0141935_42	phrog_116	263.6	0	DNA methyltransferase	other
UniRef90	UHGV-0141935_42	UniRef90_A0A0U1L2E6	603.0	0	DNA (cytosine-5-)-methyltransferase	N/A
eggNOG-mapper	UHGV-0141935_42	1123288.SOV_2c03860	603.0	0	C-5 cytosine-specific DNA methylase	N/A
PADLOC	UHGV-0141935_42	MTase_II_00164	89.2	1.3e-30	Type II methyltransferase	RM
Pfam	UHGV-0141935_42	PF00145	N/A	N/A	C-5 cytosine-specific DNA methylase	DNA_methylase
COG	UHGV-0141935_42	COG0270	N/A	N/A	DNA-cytosine methylase	N/A
structural_annotation	UHGV-0141935_42	PF00145,MF_00351,TIGR00675,COG0270	N/A	N/A	N/A	N/A
Pfam	UHGV-0141935_43	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
structural_annotation	UHGV-0141935_44	PF13601,MF_01909,TIGR03433,COG2345	N/A	N/A	N/A	N/A
UniRef90	UHGV-0141935_47	UniRef90_UPI000E31DAF9	95.5	1.73e-24	helix-turn-helix domain-containing protein	N/A
eggNOG-mapper	UHGV-0141935_47	445974.CLORAM_02965	80.5	2.43e-19	N/A	N/A
structural_annotation	UHGV-0141935_47	PF05339,NF041951,COG3655	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_48	K01356	114.9	1.1e-33	lexA; repressor LexA [EC:3.4.21.88]	N/A
PHROG	UHGV-0141935_48	phrog_4	130.2	1.8e-38	transcriptional repressor	transcription regulation
UniRef90	UHGV-0141935_48	UniRef90_R6MAH2	239.0	0	LexA repressor	N/A
eggNOG-mapper	UHGV-0141935_48	796940.HMPREF9628_00178	147.0	7.33019e-42	Peptidase S24-like	N/A
Pfam	UHGV-0141935_48	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
Pfam	UHGV-0141935_48	PF00717	N/A	N/A	Peptidase S24-like	Peptidase_S24
COG	UHGV-0141935_48	COG1974	N/A	N/A	SOS-response transcriptional repressor LexA (RecA-mediated autopeptidase)	N/A
structural_annotation	UHGV-0141935_48	PF00717,PF01381,MF_00015,TIGR00498,COG2932	N/A	N/A	N/A	N/A
PHROG	UHGV-0141935_51	phrog_14556	40.3	0.000000000029	N/A	unknown function
UniRef90	UHGV-0141935_51	UniRef90_A0A8D9PDV2	64.7	0.00000000000666	DNA methyl phosphotriester repair domain protein	N/A
eggNOG-mapper	UHGV-0141935_51	246194.CHY_1699	71.2	0.000000000000129	Staphylococcal nuclease homologue	N/A
COG	UHGV-0141935_51	COG1525	N/A	N/A	Endonuclease YncB, thermonuclease family	N/A
KOfam	UHGV-0141935_53	K14059	169.6	0	int; integrase	N/A
PHROG	UHGV-0141935_53	phrog_1	168.1	0	integrase	integration and excision
UniRef90	UHGV-0141935_53	UniRef90_UPI00189C3873	244.0	0	site-specific integrase	N/A
eggNOG-mapper	UHGV-0141935_53	1304866.K413DRAFT_1180	220.0	0	Belongs to the 'phage' integrase family	N/A
Pfam	UHGV-0141935_53	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0141935_53	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0141935_53	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0141935_53	PF00589,PF12167,MF_02055,NF040815,COG4974	N/A	N/A	N/A	N/A
KOfam	UHGV-0141935_54	K06959	121.3	6.9e-36	tex; protein Tex	N/A
UniRef90	UHGV-0141935_54	UniRef90_A0A3C0WZR5	183.0	0	RNA-binding transcriptional accessory protein (Fragment)	N/A
eggNOG-mapper	UHGV-0141935_54	1235797.C816_02323	147.0	4.16e-39	Likely ribonuclease with RNase H fold.	N/A
Pfam	UHGV-0141935_54	PF09371	N/A	N/A	Tex-like protein N-terminal domain	Tex_N
COG	UHGV-0141935_54	COG2183	N/A	N/A	Transcriptional accessory protein Tex/SPT6	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0141935	Yes	39,920	44	100	1