vOTU vOTU-073076

vOTU: vOTU-073076

Overview

Genome (FASTA) Annotation Track (GFF) Proteins (FASTA) Protein Annotation (TSV)

Cluster properties
vOTU ID	vOTU-073076
Number of genomes	4
Taxonomy (ICTV)	Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes
Taxonomy (UHGV)	vFAM-00090 → vSUBFAM-00163 → vGENUS-01326 → vSUBGEN-26597 → vOTU-073076
Host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235
Host range breadth	Species
Lifestyle	temperate (evidence: geNomad)

Representative genome
Genome ID	UHGV-0112163
Biosample ID	N/A
Genome length (bp)	15,090 bps
CheckV completeness	99.90% (High-quality)
CDS count	26
CDS density	86.48%
tRNA count	0
Integrase	No
Viral confidence	Confident

Host assignment details
Assignment method	PHIST
CRISPR-predicted host lineage		Total connections		Host agreement
PHIST-predicted host lineage	Bacteria → Firmicutes_A → Clostridia → Oscillospirales → Oscillospiraceae → ER4 → ER4 sp000765235	Total connections	196	Host agreement	87.24

Representative genome content

Select to view: Genome Viewer Functional Annotation

Genome view (completeness: 99.9)

Functional Annotation

Reference	Gene ID	Reference ID	Bit-score	E-value	Information	Category
eggNOG-mapper	UHGV-0112163_1	469618.FVAG_02009	68.6	0.00000000000817	N/A	N/A
structural_annotation	UHGV-0112163_1	PF02474,MF_02210,NF007025,COG0456	N/A	N/A	N/A	N/A
PHROG	UHGV-0112163_4	phrog_6244	48.9	0.00000000000015	N/A	unknown function
eggNOG-mapper	UHGV-0112163_4	1519439.JPJG01000044_gene958	99.4	3.56e-26	N/A	N/A
structural_annotation	UHGV-0112163_7	NF041070	N/A	N/A	N/A	N/A
PHROG	UHGV-0112163_9	phrog_1535	83.1	3.4e-36	tail length tape measure protein	tail
UniRef90	UHGV-0112163_9	UniRef90_A0A810PX76	125.0	3.42e-26	Phage tail tape measure protein	N/A
eggNOG-mapper	UHGV-0112163_9	693746.OBV_18190	136.0	3.62e-30	domain protein	N/A
COG	UHGV-0112163_9	COG1511	N/A	N/A	N/A	N/A
structural_annotation	UHGV-0112163_9	PF05546,TIGR02559	N/A	N/A	N/A	N/A
PHROG	UHGV-0112163_10	phrog_706	120.8	1.1e-35	N/A	unknown function
UniRef90	UHGV-0112163_10	UniRef90_UPI001D069FB9	216.0	0	Gp15 family bacteriophage protein	N/A
eggNOG-mapper	UHGV-0112163_10	693746.OBV_18170	195.0	0	Bacteriophage Gp15 protein	N/A
Pfam	UHGV-0112163_10	PF06854	N/A	N/A	Bacteriophage Gp15 protein	Phage_Gp15
structural_annotation	UHGV-0112163_10	PF06854	N/A	N/A	N/A	N/A
PHROG	UHGV-0112163_11	phrog_11299	77.0	3.1e-22	N/A	unknown function
eggNOG-mapper	UHGV-0112163_11	693746.OBV_18160	171.0	0	N/A	N/A
structural_annotation	UHGV-0112163_11	PF10666	N/A	N/A	N/A	N/A
UniRef90	UHGV-0112163_15	UniRef90_UPI001ADEF26B	72.4	0.000000000000075	phBC6A51 family helix-turn-helix protein	N/A
eggNOG-mapper	UHGV-0112163_15	240302.BN982_03343	80.1	1.25e-17	N/A	N/A
structural_annotation	UHGV-0112163_15	PF13022	N/A	N/A	N/A	N/A
UniRef90	UHGV-0112163_16	UniRef90_UPI001957B4F0	142.0	3.58e-39	sigma-70 family RNA polymerase sigma factor	N/A
eggNOG-mapper	UHGV-0112163_16	742738.HMPREF9460_00723	91.7	3.4e-20	Sigma-70, region 4	N/A
COG	UHGV-0112163_16	COG0568	N/A	N/A	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	N/A
structural_annotation	UHGV-0112163_16	PF07638,MF_00959,NF006147,COG0568	N/A	N/A	N/A	N/A
KOfam	UHGV-0112163_20	K02314	279.4	0	dnaB; replicative DNA helicase [EC:5.6.2.3]	N/A
PHROG	UHGV-0112163_20	phrog_19	235.3	0	DnaB-like replicative helicase	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0112163_20	UniRef90_UPI001C111256	625.0	0	AAA family ATPase	N/A
eggNOG-mapper	UHGV-0112163_20	1121020.JIAG01000005_gene2356	186.0	0	Participates in initiation and elongation during chromosome replication	N/A
Pfam	UHGV-0112163_20	PF00772	N/A	N/A	DnaB-like helicase N terminal domain	DnaB
Pfam	UHGV-0112163_20	PF03796	N/A	N/A	DnaB-like helicase C terminal domain	DnaB_C
COG	UHGV-0112163_20	COG0305	N/A	N/A	Replicative DNA helicase	N/A
structural_annotation	UHGV-0112163_20	PF03796,PF00772,MF_04155,TIGR00665,COG0305	N/A	N/A	N/A	N/A
PHROG	UHGV-0112163_21	phrog_2514	73.3	3.4e-21	DnaD-like helicase loader	DNA, RNA and nucleotide metabolism
UniRef90	UHGV-0112163_21	UniRef90_A0A3D1LEN0	151.0	6.21055e-42	N/A	N/A
eggNOG-mapper	UHGV-0112163_21	1423775.BAMN01000006_gene1070	75.5	0.000000000000172	Replication initiation and membrane attachment	N/A
Pfam	UHGV-0112163_21	PF19808	N/A	N/A	N/A	DUF6291
COG	UHGV-0112163_21	COG3935	N/A	N/A	DNA replication protein DnaD	N/A
UniRef90	UHGV-0112163_22	UniRef90_A0A417NGM9	95.9	6.6e-25	DNA-binding protein	N/A
eggNOG-mapper	UHGV-0112163_22	742738.HMPREF9460_02489	50.1	0.000000137	Helix-turn-helix domain	N/A
Pfam	UHGV-0112163_22	PF12728	N/A	N/A	Helix-turn-helix domain	HTH_17
NCBIFam	UHGV-0112163_22	TIGR01764.1	N/A	N/A	excisionase family DNA-binding protein	N/A
PHROG	UHGV-0112163_23	phrog_17740	44.1	0.0000000000026	N/A	unknown function
UniRef90	UHGV-0112163_23	UniRef90_A0A412KEL9	48.9	0.00000333	XRE family transcriptional regulator	N/A
eggNOG-mapper	UHGV-0112163_23	742738.HMPREF9460_00730	56.2	0.000000000544	N/A	N/A
structural_annotation	UHGV-0112163_23	PF13560,COG3423	N/A	N/A	N/A	N/A
PHROG	UHGV-0112163_24	phrog_8	52.9	0.0000000000000073	transcriptional regulator	transcription regulation
UniRef90	UHGV-0112163_24	UniRef90_A0A2V2GJB9	122.0	2.53e-30	HTH cro/C1-type domain-containing protein	N/A
eggNOG-mapper	UHGV-0112163_24	689781.AUJX01000031_gene90	62.0	0.000000015	N/A	N/A
Pfam	UHGV-0112163_24	PF01381	N/A	N/A	Helix-turn-helix	HTH_3
KOfam	UHGV-0112163_26	K14059	301.9	0	int; integrase	N/A
PHROG	UHGV-0112163_26	phrog_1	203.8	0	integrase	integration and excision
UniRef90	UHGV-0112163_26	UniRef90_A0A417NGP1	835.0	0	Site-specific integrase	N/A
eggNOG-mapper	UHGV-0112163_26	877414.ATWA01000018_gene2094	386.0	0	Phage integrase family	N/A
Pfam	UHGV-0112163_26	PF14659	N/A	N/A	Phage integrase, N-terminal SAM-like domain	Phage_int_SAM_3
Pfam	UHGV-0112163_26	PF00589	N/A	N/A	Phage integrase family	Phage_integrase
COG	UHGV-0112163_26	COG0582	N/A	N/A	Integrase/recombinase, includes phage integrase	N/A
structural_annotation	UHGV-0112163_26	PF00589,PF02920,PF14659,MF_01808,TIGR02224,COG4974	N/A	N/A	N/A	N/A

All viral genomes

ID	Representative?	Length (bps)	% GC Content	CheckV Completeness	geNomad Score
UHGV-0112163	Yes	15,090	52	100	1
UHGV-2105387	No	15,788	51	100	1
UHGV-2052493	No	8,447	55	59	1
UHGV-1489316	No	8,299	55	58	1